RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 TMX1Q9H3N1 280 aa12.29□□□□□ -0.44
TOP3B-210ENST00000444502 CEP170BQ9Y4F5 1589 aaPredicted RBP12.28□□□□□ -0.44
TOP3B-210ENST00000444502 POLD1P28340 1107 aa12.28□□□□□ -0.44
TOP3B-210ENST00000444502 CTCFLQ8NI51 663 aaPredicted RBP12.28□□□□□ -0.44
TOP3B-210ENST00000444502 PCMTD1Q96MG8 357 aaPredicted RBP12.28□□□□□ -0.44
TOP3B-210ENST00000444502 DACT1Q9NYF0 836 aa12.28□□□□□ -0.44
TOP3B-210ENST00000444502 USP32Q8NFA0 1604 aa12.28□□□□□ -0.44
TOP3B-210ENST00000444502 KDM4FA0A1W2PPD8 638 aa12.28□□□□□ -0.44
TOP3B-210ENST00000444502 PATL2C9JE40 543 aaKnown RBP12.28□□□□□ -0.44
TOP3B-210ENST00000444502 RPS6KB1P23443 525 aa12.28□□□□□ -0.44
TOP3B-210ENST00000444502 XAGE2Q96GT9 111 aa12.28□□□□□ -0.44
TOP3B-210ENST00000444502 KLF18A0A0U1RQI7 1052 aa12.28□□□□□ -0.44
TOP3B-210ENST00000444502 JAK2O60674 1132 aa12.28□□□□□ -0.44
TOP3B-210ENST00000444502 RXRBP28702 533 aa12.28□□□□□ -0.44
TOP3B-210ENST00000444502 KRT27Q7Z3Y8 459 aa12.28□□□□□ -0.44
TOP3B-210ENST00000444502 FILIP1Q7Z7B0 1213 aa12.28□□□□□ -0.44
TOP3B-210ENST00000444502 PUS3Q9BZE2 481 aaKnown RBP12.28□□□□□ -0.44
TOP3B-210ENST00000444502 NCOA5Q9HCD5 579 aaKnown RBP12.28□□□□□ -0.44
TOP3B-210ENST00000444502 ORC3Q9UBD5 711 aaPredicted RBP12.28□□□□□ -0.44
TOP3B-210ENST00000444502 RNF113AO15541 343 aaKnown RBP12.27□□□□□ -0.44
TOP3B-210ENST00000444502 WDR78Q5VTH9 848 aa12.27□□□□□ -0.44
TOP3B-210ENST00000444502 ZNF589Q86UQ0 364 aaPredicted RBP12.27□□□□□ -0.44
TOP3B-210ENST00000444502 IL25Q9H293 177 aa12.27□□□□□ -0.44
TOP3B-210ENST00000444502 GOLGA8AA7E2F4 631 aa12.27□□□□□ -0.45
TOP3B-210ENST00000444502 CDKL5O76039 1030 aa12.27□□□□□ -0.45
TOP3B-210ENST00000444502 ZHX3Q9H4I2 956 aa12.27□□□□□ -0.45
TOP3B-210ENST00000444502 VEZTQ9HBM0 779 aa12.27□□□□□ -0.45
TOP3B-210ENST00000444502 ADCY9O60503 1353 aa12.27□□□□□ -0.45
TOP3B-210ENST00000444502 LARGE1O95461 756 aa12.27□□□□□ -0.45
TOP3B-210ENST00000444502 TRMT1LQ7Z2T5 733 aaKnown RBP12.27□□□□□ -0.45
TOP3B-210ENST00000444502 HOMER1Q86YM7 354 aa12.27□□□□□ -0.45
TOP3B-210ENST00000444502 OGFOD1Q8N543 542 aa12.27□□□□□ -0.45
TOP3B-210ENST00000444502 KBTBD3Q8NAB2 608 aa12.27□□□□□ -0.45
TOP3B-210ENST00000444502 TPCN1Q9ULQ1 816 aa12.27□□□□□ -0.45
TOP3B-210ENST00000444502 SMC2O95347 1197 aa12.26□□□□□ -0.45
TOP3B-210ENST00000444502 SSBP05455 408 aaKnown RBP eCLIP12.26□□□□□ -0.45
TOP3B-210ENST00000444502 ATP5JP18859 108 aa12.26□□□□□ -0.45
TOP3B-210ENST00000444502 BAG6P46379 1132 aa12.26□□□□□ -0.45
TOP3B-210ENST00000444502 FEZ1Q99689 392 aa12.26□□□□□ -0.45
TOP3B-210ENST00000444502 TTC12Q9H892 705 aaPredicted RBP12.26□□□□□ -0.45
TOP3B-210ENST00000444502 ZNF287Q9HBT7 754 aa12.26□□□□□ -0.45
TOP3B-210ENST00000444502 RXRAP19793 462 aa12.26□□□□□ -0.45
TOP3B-210ENST00000444502 HSPA1LP34931 641 aa12.26□□□□□ -0.45
TOP3B-210ENST00000444502 SPTY2D1Q68D10 685 aaPredicted RBP12.26□□□□□ -0.45
TOP3B-210ENST00000444502 CRNKL1Q9BZJ0 848 aaKnown RBP12.26□□□□□ -0.45
TOP3B-210ENST00000444502 RNF41Q9H4P4 317 aaPredicted RBP12.26□□□□□ -0.45
TOP3B-210ENST00000444502 SRP68Q9UHB9 627 aaKnown RBP12.26□□□□□ -0.45
TOP3B-210ENST00000444502 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.26□□□□□ -0.45
TOP3B-210ENST00000444502 SLFNL1Q499Z3 407 aa12.26□□□□□ -0.45
TOP3B-210ENST00000444502 CDC37L1Q7L3B6 337 aa12.26□□□□□ -0.45
TOP3B-210ENST00000444502 DHX32Q7L7V1 743 aaKnown RBP12.26□□□□□ -0.45
TOP3B-210ENST00000444502 SLF2Q8IX21 1173 aa12.26□□□□□ -0.45
TOP3B-210ENST00000444502 GPATCH11Q8N954 259 aa12.26□□□□□ -0.45
TOP3B-210ENST00000444502 FSIP1Q8NA03 581 aa12.26□□□□□ -0.45
TOP3B-210ENST00000444502 CCDC47Q96A33 483 aaKnown RBP12.26□□□□□ -0.45
TOP3B-210ENST00000444502 ZNF804AQ7Z570 1209 aa12.26□□□□□ -0.45
TOP3B-210ENST00000444502 COPRSQ9NQ92 184 aa12.26□□□□□ -0.45
TOP3B-210ENST00000444502 MCM9Q9NXL9 1143 aa12.26□□□□□ -0.45
TOP3B-210ENST00000444502 HOOK1Q9UJC3 728 aaKnown RBP12.26□□□□□ -0.45
TOP3B-210ENST00000444502 PTPN12Q05209 780 aaKnown RBP12.25□□□□□ -0.45
TOP3B-210ENST00000444502 DIP2AQ14689 1571 aa12.25□□□□□ -0.45
TOP3B-210ENST00000444502 NCOA7Q8NI08 942 aa12.25□□□□□ -0.45
TOP3B-210ENST00000444502 GREM2Q9H772 168 aa12.25□□□□□ -0.45
TOP3B-210ENST00000444502 RIMS1Q86UR5 1692 aaKnown RBP12.25□□□□□ -0.45
TOP3B-210ENST00000444502 TNS3Q68CZ2 1445 aa12.25□□□□□ -0.45
TOP3B-210ENST00000444502 ZFYP08048 801 aaPredicted RBP12.25□□□□□ -0.45
TOP3B-210ENST00000444502 ZNF445P59923 1031 aa12.25□□□□□ -0.45
TOP3B-210ENST00000444502 CDK5RAP3Q96JB5 506 aa12.25□□□□□ -0.45
TOP3B-210ENST00000444502 PPP1R9BQ96SB3 815 aa12.25□□□□□ -0.45
TOP3B-210ENST00000444502 BIN1O00499 593 aa12.25□□□□□ -0.45
TOP3B-210ENST00000444502 ECM2O94769 699 aaPredicted RBP12.25□□□□□ -0.45
TOP3B-210ENST00000444502 MBD4O95243 580 aa12.25□□□□□ -0.45
TOP3B-210ENST00000444502 RPS8P62241 208 aaKnown RBP12.25□□□□□ -0.45
TOP3B-210ENST00000444502 CUL4AQ13619 759 aa12.25□□□□□ -0.45
TOP3B-210ENST00000444502 TTLL5Q6EMB2 1281 aa12.25□□□□□ -0.45
TOP3B-210ENST00000444502 ISM2Q6H9L7 571 aa12.25□□□□□ -0.45
TOP3B-210ENST00000444502 ZKSCAN3Q9BRR0 538 aa12.25□□□□□ -0.45
TOP3B-210ENST00000444502 PRC1O43663 620 aa12.24□□□□□ -0.45
TOP3B-210ENST00000444502 MCM5P33992 734 aa12.24□□□□□ -0.45
TOP3B-210ENST00000444502 PUM3Q15397 648 aaKnown RBP12.24□□□□□ -0.45
TOP3B-210ENST00000444502 OTUD7BQ6GQQ9 843 aa12.24□□□□□ -0.45
TOP3B-210ENST00000444502 MYRIPQ8NFW9 859 aa12.24□□□□□ -0.45
TOP3B-210ENST00000444502 CERKQ8TCT0 537 aa12.24□□□□□ -0.45
TOP3B-210ENST00000444502 SECISBP2LQ93073 1101 aaKnown RBP12.24□□□□□ -0.45
TOP3B-210ENST00000444502 NAT10Q9H0A0 1025 aaKnown RBP12.24□□□□□ -0.45
TOP3B-210ENST00000444502 ZSWIM6Q9HCJ5 1215 aa12.24□□□□□ -0.45
TOP3B-210ENST00000444502 PTPDC1A2A3K4 754 aa12.24□□□□□ -0.45
TOP3B-210ENST00000444502 PRDM1O75626 825 aa12.24□□□□□ -0.45
TOP3B-210ENST00000444502 LDHBP07195 334 aaKnown RBP12.24□□□□□ -0.45
TOP3B-210ENST00000444502 PDE4BQ07343 736 aa12.24□□□□□ -0.45
TOP3B-210ENST00000444502 GIGYF2Q6Y7W6 1299 aaKnown RBP12.24□□□□□ -0.45
TOP3B-210ENST00000444502 JDP2Q8WYK2 163 aa12.24□□□□□ -0.45
TOP3B-210ENST00000444502 ZDHHC9Q9Y397 364 aa12.24□□□□□ -0.45
TOP3B-210ENST00000444502 NRKQ7Z2Y5 1582 aa12.24□□□□□ -0.45
TOP3B-210ENST00000444502 MAP3K15Q6ZN16 1313 aa12.24□□□□□ -0.45
TOP3B-210ENST00000444502 SSH2Q76I76 1423 aa12.24□□□□□ -0.45
TOP3B-210ENST00000444502 KIF20BQ96Q89 1820 aa12.24□□□□□ -0.45
TOP3B-210ENST00000444502 MAGEB6P1A0A0J9YX57 407 aa12.24□□□□□ -0.45
TOP3B-210ENST00000444502 HIBADHP31937 336 aaKnown RBP12.24□□□□□ -0.45
TOP3B-210ENST00000444502 ZAP70P43403 619 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms