RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 CFAP47Q6ZTR5 3102 aa10.05□□□□□ -0.8
SSXP3-201ENST00000442971 UNCXA6NJT0 531 aa10.05□□□□□ -0.8
SSXP3-201ENST00000442971 NBPF26B4DH59 902 aa10.05□□□□□ -0.8
SSXP3-201ENST00000442971 ECE2O60344 883 aa10.05□□□□□ -0.8
SSXP3-201ENST00000442971 FMNL1O95466 1100 aaPredicted RBP10.05□□□□□ -0.8
SSXP3-201ENST00000442971 CCDC85BQ15834 202 aaPredicted RBP10.05□□□□□ -0.8
SSXP3-201ENST00000442971 NBPF9Q3BBW0 867 aa10.05□□□□□ -0.8
SSXP3-201ENST00000442971 FAM43AQ8N2R8 423 aa10.05□□□□□ -0.8
SSXP3-201ENST00000442971 BRI3BPQ8WY22 251 aa10.05□□□□□ -0.8
SSXP3-201ENST00000442971 MS4A4AQ96JQ5 239 aa10.05□□□□□ -0.8
SSXP3-201ENST00000442971 GAS2L1Q99501 681 aaPredicted RBP10.05□□□□□ -0.8
SSXP3-201ENST00000442971 LGR6Q9HBX8 967 aa10.05□□□□□ -0.8
SSXP3-201ENST00000442971 COL3A1P02461 1466 aaPredicted RBP10.04□□□□□ -0.8
SSXP3-201ENST00000442971 INHAP05111 366 aa10.04□□□□□ -0.8
SSXP3-201ENST00000442971 KCNQ1P51787 676 aa10.04□□□□□ -0.8
SSXP3-201ENST00000442971 AAK1Q2M2I8 961 aa10.04□□□□□ -0.8
SSXP3-201ENST00000442971 DDX60LQ5H9U9 1706 aaKnown RBP10.04□□□□□ -0.8
SSXP3-201ENST00000442971 DUOX1Q9NRD9 1551 aa10.03□□□□□ -0.8
SSXP3-201ENST00000442971 ZFHX2Q9C0A1 2572 aaPredicted RBP10.03□□□□□ -0.8
SSXP3-201ENST00000442971 DDX60Q8IY21 1712 aaKnown RBP10.03□□□□□ -0.8
SSXP3-201ENST00000442971 TPRP12270 2363 aaKnown RBP10.03□□□□□ -0.8
SSXP3-201ENST00000442971 RIMBP2O15034 1052 aa10.03□□□□□ -0.8
SSXP3-201ENST00000442971 BBOX1O75936 387 aa10.03□□□□□ -0.8
SSXP3-201ENST00000442971 USP17L8P0C7I0 530 aa10.03□□□□□ -0.8
SSXP3-201ENST00000442971 TFF2Q03403 129 aa10.03□□□□□ -0.8
SSXP3-201ENST00000442971 PRKCZQ05513 592 aa10.03□□□□□ -0.8
SSXP3-201ENST00000442971 EIF4A2Q14240 407 aaKnown RBP10.03□□□□□ -0.8
SSXP3-201ENST00000442971 DOK7Q18PE1 504 aa10.03□□□□□ -0.8
SSXP3-201ENST00000442971 C9orf50Q5SZB4 431 aa10.03□□□□□ -0.8
SSXP3-201ENST00000442971 C3orf67Q6ZVT6 689 aa10.03□□□□□ -0.8
SSXP3-201ENST00000442971 TTC5Q8N0Z6 440 aa10.03□□□□□ -0.8
SSXP3-201ENST00000442971 ZBTB38Q8NAP3 1195 aaPredicted RBP10.03□□□□□ -0.8
SSXP3-201ENST00000442971 AGBL3Q8NEM8 1001 aa10.03□□□□□ -0.8
SSXP3-201ENST00000442971 TSPYL2Q9H2G4 693 aaPredicted RBP10.03□□□□□ -0.8
SSXP3-201ENST00000442971 SCN9AQ15858 1988 aa10.03□□□□□ -0.8
SSXP3-201ENST00000442971 PTPRZ1P23471 2315 aaPredicted RBP10.03□□□□□ -0.8
SSXP3-201ENST00000442971 ABCC4O15439 1325 aa10.02□□□□□ -0.81
SSXP3-201ENST00000442971 MYO9BQ13459 2157 aa10.02□□□□□ -0.81
SSXP3-201ENST00000442971 CCL15-CCL14A0A0B4J2E2 113 aa10.02□□□□□ -0.81
SSXP3-201ENST00000442971 PPP1R12BO60237 982 aaPredicted RBP10.02□□□□□ -0.81
SSXP3-201ENST00000442971 ADCY3O60266 1144 aa10.02□□□□□ -0.81
SSXP3-201ENST00000442971 ACAP1Q15027 740 aa10.02□□□□□ -0.81
SSXP3-201ENST00000442971 CCL15Q16663 113 aa10.02□□□□□ -0.81
SSXP3-201ENST00000442971 HEG1Q9ULI3 1381 aa10.01□□□□□ -0.81
SSXP3-201ENST00000442971 TRANK1O15050 2925 aa10.01□□□□□ -0.81
SSXP3-201ENST00000442971 GFRA3O60609 400 aa10.01□□□□□ -0.81
SSXP3-201ENST00000442971 ELNP15502 786 aa10.01□□□□□ -0.81
SSXP3-201ENST00000442971 PIP4K2AP48426 406 aaPredicted RBP10.01□□□□□ -0.81
SSXP3-201ENST00000442971 RSBN1LQ6PCB5 846 aaPredicted RBP10.01□□□□□ -0.81
SSXP3-201ENST00000442971 PUS7Q96PZ0 661 aaKnown RBP10.01□□□□□ -0.81
SSXP3-201ENST00000442971 ZNF576Q9H609 170 aa10.01□□□□□ -0.81
SSXP3-201ENST00000442971 PFASO15067 1338 aa10□□□□□ -0.81
SSXP3-201ENST00000442971 FASNP49327 2511 aaKnown RBP10□□□□□ -0.81
SSXP3-201ENST00000442971 RNMTO43148 476 aaKnown RBP10□□□□□ -0.81
SSXP3-201ENST00000442971 HLFQ16534 295 aa10□□□□□ -0.81
SSXP3-201ENST00000442971 CSPP1Q1MSJ5 1256 aa10□□□□□ -0.81
SSXP3-201ENST00000442971 C17orf99Q6UX52 265 aa10□□□□□ -0.81
SSXP3-201ENST00000442971 OPTNQ96CV9 577 aa10□□□□□ -0.81
SSXP3-201ENST00000442971 GTF2A2P52657 109 aa9.99□□□□□ -0.81
SSXP3-201ENST00000442971 PODNQ7Z5L7 613 aa9.99□□□□□ -0.81
SSXP3-201ENST00000442971 GMLQ99445 158 aa9.99□□□□□ -0.81
SSXP3-201ENST00000442971 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.99□□□□□ -0.81
SSXP3-201ENST00000442971 GABRQQ9UN88 632 aa9.99□□□□□ -0.81
SSXP3-201ENST00000442971 ZNF318Q5VUA4 2279 aa9.99□□□□□ -0.81
SSXP3-201ENST00000442971 REV3LO60673 3130 aa9.98□□□□□ -0.81
SSXP3-201ENST00000442971 KIF20BQ96Q89 1820 aa9.98□□□□□ -0.81
SSXP3-201ENST00000442971 C19orf67A6NJJ6 358 aa9.98□□□□□ -0.81
SSXP3-201ENST00000442971 WNT10BO00744 389 aa9.98□□□□□ -0.81
SSXP3-201ENST00000442971 LRRC26Q2I0M4 334 aa9.98□□□□□ -0.81
SSXP3-201ENST00000442971 APOBEC3FQ8IUX4 373 aaKnown RBP9.98□□□□□ -0.81
SSXP3-201ENST00000442971 ANKRD13AQ8IZ07 590 aa9.98□□□□□ -0.81
SSXP3-201ENST00000442971 PXYLP1Q8TE99 480 aa9.98□□□□□ -0.81
SSXP3-201ENST00000442971 CNTNAP3BQ96NU0 1288 aa9.98□□□□□ -0.81
SSXP3-201ENST00000442971 NLRP3Q96P20 1036 aa9.98□□□□□ -0.81
SSXP3-201ENST00000442971 CNTNAP3Q9BZ76 1288 aa9.98□□□□□ -0.81
SSXP3-201ENST00000442971 CPA4Q9UI42 421 aa9.98□□□□□ -0.81
SSXP3-201ENST00000442971 DNAJB2P25686 324 aa9.97□□□□□ -0.81
SSXP3-201ENST00000442971 ID4P47928 161 aa9.97□□□□□ -0.81
SSXP3-201ENST00000442971 IREB2P48200 963 aaKnown RBP9.97□□□□□ -0.81
SSXP3-201ENST00000442971 PRDM12Q9H4Q4 367 aa9.97□□□□□ -0.81
SSXP3-201ENST00000442971 ELP3Q9H9T3 547 aa9.97□□□□□ -0.81
SSXP3-201ENST00000442971 ZCCHC17Q9NP64 241 aaKnown RBP9.97□□□□□ -0.81
SSXP3-201ENST00000442971 DNAH12Q6ZR08 3092 aa9.96□□□□□ -0.81
SSXP3-201ENST00000442971 C6orf229H3BNL8 230 aa9.96□□□□□ -0.82
SSXP3-201ENST00000442971 FARP1Q9Y4F1 1045 aaPredicted RBP9.96□□□□□ -0.82
SSXP3-201ENST00000442971 ROCK2O75116 1388 aaKnown RBP9.96□□□□□ -0.82
SSXP3-201ENST00000442971 LTBP2Q14767 1821 aa9.96□□□□□ -0.82
SSXP3-201ENST00000442971 GPR179Q6PRD1 2367 aa9.95□□□□□ -0.82
SSXP3-201ENST00000442971 MGAMO43451 1857 aa9.95□□□□□ -0.82
SSXP3-201ENST00000442971 MED19A0JLT2 244 aaPredicted RBP9.95□□□□□ -0.82
SSXP3-201ENST00000442971 TLL1O43897 1013 aa9.95□□□□□ -0.82
SSXP3-201ENST00000442971 U2AF1L5P0DN76 240 aaPredicted RBP9.95□□□□□ -0.82
SSXP3-201ENST00000442971 IGFBP4P22692 258 aa9.95□□□□□ -0.82
SSXP3-201ENST00000442971 FCGRTP55899 365 aa9.95□□□□□ -0.82
SSXP3-201ENST00000442971 U2AF1Q01081 240 aaKnown RBP eCLIP9.95□□□□□ -0.82
SSXP3-201ENST00000442971 ADGRE1Q14246 886 aa9.95□□□□□ -0.82
SSXP3-201ENST00000442971 EYA3Q99504 573 aa9.95□□□□□ -0.82
SSXP3-201ENST00000442971 POLLQ9UGP5 575 aa9.95□□□□□ -0.82
SSXP3-201ENST00000442971 NSFL1CQ9UNZ2 370 aaKnown RBP9.95□□□□□ -0.82
SSXP3-201ENST00000442971 ACACBO00763 2458 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms