RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 SMARCC2Q8TAQ2 1214 aa12.9□□□□□ -0.34
SEC16A-206ENST00000431893 PSMB7Q99436 277 aa12.9□□□□□ -0.34
SEC16A-206ENST00000431893 PCDHB15Q9Y5E8 787 aa12.9□□□□□ -0.34
SEC16A-206ENST00000431893 CIB2O75838 187 aa12.9□□□□□ -0.35
SEC16A-206ENST00000431893 HSPA1LP34931 641 aa12.9□□□□□ -0.35
SEC16A-206ENST00000431893 KRT2P35908 639 aa12.9□□□□□ -0.35
SEC16A-206ENST00000431893 CCDC122Q5T0U0 273 aa12.9□□□□□ -0.35
SEC16A-206ENST00000431893 ANKLE2Q86XL3 938 aa12.9□□□□□ -0.35
SEC16A-206ENST00000431893 DDX12PQ92771 950 aa12.9□□□□□ -0.35
SEC16A-206ENST00000431893 PFDN4Q9NQP4 134 aa12.9□□□□□ -0.35
SEC16A-206ENST00000431893 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.89□□□□□ -0.35
SEC16A-206ENST00000431893 ATP2A1O14983 1001 aa12.89□□□□□ -0.35
SEC16A-206ENST00000431893 ZNF131P52739 623 aa12.89□□□□□ -0.35
SEC16A-206ENST00000431893 HDXQ7Z353 690 aa12.89□□□□□ -0.35
SEC16A-206ENST00000431893 CEP120Q8N960 986 aa12.89□□□□□ -0.35
SEC16A-206ENST00000431893 AFAP1L1Q8TED9 768 aa12.89□□□□□ -0.35
SEC16A-206ENST00000431893 KRT23Q9C075 422 aa12.89□□□□□ -0.35
SEC16A-206ENST00000431893 PPANQ9NQ55 473 aaKnown RBP12.89□□□□□ -0.35
SEC16A-206ENST00000431893 LACTBP83111 547 aaPredicted RBP12.89□□□□□ -0.35
SEC16A-206ENST00000431893 WDR66Q8TBY9 1149 aa12.89□□□□□ -0.35
SEC16A-206ENST00000431893 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.89□□□□□ -0.35
SEC16A-206ENST00000431893 ATAD2BQ9ULI0 1458 aa12.89□□□□□ -0.35
SEC16A-206ENST00000431893 NBPF7P0C2Y1 421 aaPredicted RBP12.89□□□□□ -0.35
SEC16A-206ENST00000431893 DAPK1P53355 1430 aa12.89□□□□□ -0.35
SEC16A-206ENST00000431893 ATP11AP98196 1134 aa12.89□□□□□ -0.35
SEC16A-206ENST00000431893 CRCPO75575 148 aa12.89□□□□□ -0.35
SEC16A-206ENST00000431893 CLNS1AP54105 237 aaKnown RBP12.89□□□□□ -0.35
SEC16A-206ENST00000431893 MCMDC2Q4G0Z9 681 aa12.89□□□□□ -0.35
SEC16A-206ENST00000431893 GKAP1Q5VSY0 366 aaPredicted RBP12.89□□□□□ -0.35
SEC16A-206ENST00000431893 SIRT1Q96EB6 747 aa12.89□□□□□ -0.35
SEC16A-206ENST00000431893 ACSBG1Q96GR2 724 aa12.89□□□□□ -0.35
SEC16A-206ENST00000431893 MAK16Q9BXY0 300 aaKnown RBP12.89□□□□□ -0.35
SEC16A-206ENST00000431893 VPS16Q9H269 839 aa12.89□□□□□ -0.35
SEC16A-206ENST00000431893 OGFRQ9NZT2 677 aa12.89□□□□□ -0.35
SEC16A-206ENST00000431893 CCDC61Q9Y6R9 512 aa12.89□□□□□ -0.35
SEC16A-206ENST00000431893 FOXO3O43524 673 aa12.88□□□□□ -0.35
SEC16A-206ENST00000431893 MAP3K9P80192 1104 aa12.88□□□□□ -0.35
SEC16A-206ENST00000431893 ZNF174Q15697 407 aa12.88□□□□□ -0.35
SEC16A-206ENST00000431893 LMBR1Q8WVP7 490 aa12.88□□□□□ -0.35
SEC16A-206ENST00000431893 CLSTN2Q9H4D0 955 aa12.88□□□□□ -0.35
SEC16A-206ENST00000431893 STIM2Q9P246 746 aa12.88□□□□□ -0.35
SEC16A-206ENST00000431893 PDE1AP54750 535 aa12.88□□□□□ -0.35
SEC16A-206ENST00000431893 FMNL3Q8IVF7 1028 aa12.88□□□□□ -0.35
SEC16A-206ENST00000431893 CCDC170Q8IYT3 715 aa12.88□□□□□ -0.35
SEC16A-206ENST00000431893 AGTPBP1Q9UPW5 1226 aa12.88□□□□□ -0.35
SEC16A-206ENST00000431893 PLEKHH2Q8IVE3 1493 aa12.88□□□□□ -0.35
SEC16A-206ENST00000431893 BAG1Q99933 345 aaPredicted RBP12.88□□□□□ -0.35
SEC16A-206ENST00000431893 SLC39A6Q13433 755 aa12.88□□□□□ -0.35
SEC16A-206ENST00000431893 SLC9C2Q5TAH2 1124 aa12.88□□□□□ -0.35
SEC16A-206ENST00000431893 CDC5LQ99459 802 aaKnown RBP12.88□□□□□ -0.35
SEC16A-206ENST00000431893 EHBP1L1Q8N3D4 1523 aa12.87□□□□□ -0.35
SEC16A-206ENST00000431893 ELF2Q15723 593 aa12.87□□□□□ -0.35
SEC16A-206ENST00000431893 AMOTQ4VCS5 1084 aa12.87□□□□□ -0.35
SEC16A-206ENST00000431893 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.87□□□□□ -0.354e-6■■■■■ 58.9
SEC16A-206ENST00000431893 PIK3R4Q99570 1358 aa12.87□□□□□ -0.35
SEC16A-206ENST00000431893 PRPHP41219 470 aa12.87□□□□□ -0.35
SEC16A-206ENST00000431893 VAV2P52735 878 aa12.87□□□□□ -0.35
SEC16A-206ENST00000431893 ARHGEF2Q92974 986 aaKnown RBP12.87□□□□□ -0.35
SEC16A-206ENST00000431893 LRRC45Q96CN5 670 aa12.87□□□□□ -0.35
SEC16A-206ENST00000431893 A0A1B0GUL7 405 aa12.87□□□□□ -0.35
SEC16A-206ENST00000431893 VWA3AA6NCI4 1184 aa12.87□□□□□ -0.35
SEC16A-206ENST00000431893 CHRNA2Q15822 529 aa12.87□□□□□ -0.35
SEC16A-206ENST00000431893 SYNJ2O15056 1496 aa12.87□□□□□ -0.35
SEC16A-206ENST00000431893 TXNDC9O14530 226 aa12.87□□□□□ -0.35
SEC16A-206ENST00000431893 RIOK3O14730 519 aaKnown RBP12.87□□□□□ -0.35
SEC16A-206ENST00000431893 MAGEB6Q8N7X4 407 aa12.87□□□□□ -0.35
SEC16A-206ENST00000431893 LEO1Q8WVC0 666 aaPredicted RBP12.87□□□□□ -0.35
SEC16A-206ENST00000431893 PTPDC1A2A3K4 754 aa12.87□□□□□ -0.35
SEC16A-206ENST00000431893 C8orf34Q49A92 452 aa12.87□□□□□ -0.35
SEC16A-206ENST00000431893 SEL1L2Q5TEA6 688 aa12.87□□□□□ -0.35
SEC16A-206ENST00000431893 LRRC43Q8N309 656 aa12.87□□□□□ -0.35
SEC16A-206ENST00000431893 HELBQ8NG08 1087 aaPredicted RBP12.87□□□□□ -0.35
SEC16A-206ENST00000431893 ESR2Q92731 530 aa12.87□□□□□ -0.35
SEC16A-206ENST00000431893 MGARPQ8TDB4 240 aa12.86□□□□□ -0.35
SEC16A-206ENST00000431893 GDAP1L1Q96MZ0 367 aa12.86□□□□□ -0.35
SEC16A-206ENST00000431893 IMPG2Q9BZV3 1241 aa12.86□□□□□ -0.35
SEC16A-206ENST00000431893 MTRF1LQ9UGC7 380 aaKnown RBP12.86□□□□□ -0.35
SEC16A-206ENST00000431893 SEC24BO95487 1268 aa12.86□□□□□ -0.35
SEC16A-206ENST00000431893 RBSNQ9H1K0 784 aa12.86□□□□□ -0.35
SEC16A-206ENST00000431893 MAGEB6P1A0A0J9YX57 407 aa12.86□□□□□ -0.35
SEC16A-206ENST00000431893 CHMP2AO43633 222 aa12.86□□□□□ -0.35
SEC16A-206ENST00000431893 ABCC11Q96J66 1382 aa12.86□□□□□ -0.35
SEC16A-206ENST00000431893 TRIM75PA6NK02 468 aa12.86□□□□□ -0.35
SEC16A-206ENST00000431893 CPSF2Q9P2I0 782 aaKnown RBP12.86□□□□□ -0.35
SEC16A-206ENST00000431893 SAP30BPQ9UHR5 308 aaKnown RBP12.86□□□□□ -0.35
SEC16A-206ENST00000431893 MAEAQ7L5Y9 396 aa12.86□□□□□ -0.35
SEC16A-206ENST00000431893 FEZ2Q9UHY8 353 aaPredicted RBP12.86□□□□□ -0.35
SEC16A-206ENST00000431893 AKR1B15C9JRZ8 316 aaPredicted RBP12.85□□□□□ -0.35
SEC16A-206ENST00000431893 NEDD9Q14511 834 aa12.85□□□□□ -0.35
SEC16A-206ENST00000431893 RBM26Q5T8P6 1007 aaKnown RBP12.85□□□□□ -0.35
SEC16A-206ENST00000431893 PPFIBP2Q8ND30 876 aa12.85□□□□□ -0.35
SEC16A-206ENST00000431893 RRAGDQ9NQL2 400 aaPredicted RBP12.85□□□□□ -0.35
SEC16A-206ENST00000431893 SUPT6HQ7KZ85 1726 aaKnown RBP12.85□□□□□ -0.35
SEC16A-206ENST00000431893 CAVIN2O95810 425 aa12.85□□□□□ -0.35
SEC16A-206ENST00000431893 SNX16P57768 344 aa12.85□□□□□ -0.35
SEC16A-206ENST00000431893 CARD6Q9BX69 1037 aa12.85□□□□□ -0.35
SEC16A-206ENST00000431893 PAG1Q9NWQ8 432 aa12.85□□□□□ -0.35
SEC16A-206ENST00000431893 TNNC1P63316 161 aa12.85□□□□□ -0.35
SEC16A-206ENST00000431893 XAGE3Q8WTP9 111 aa12.85□□□□□ -0.35
SEC16A-206ENST00000431893 NKIRAS1Q9NYS0 192 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms