RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 FGD1P98174 961 aa6.63□□□□□ -1.35
EPHA4-202ENST00000409854 UBE3CQ15386 1083 aa6.63□□□□□ -1.35
EPHA4-202ENST00000409854 FAM84BQ96KN1 310 aaPredicted RBP6.63□□□□□ -1.35
EPHA4-202ENST00000409854 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.63□□□□□ -1.35
EPHA4-202ENST00000409854 LEMD3Q9Y2U8 911 aa6.63□□□□□ -1.35
EPHA4-202ENST00000409854 WTIPA6NIX2 430 aaPredicted RBP6.62□□□□□ -1.35
EPHA4-202ENST00000409854 ST18O60284 1047 aa6.62□□□□□ -1.35
EPHA4-202ENST00000409854 BBOX1O75936 387 aa6.62□□□□□ -1.35
EPHA4-202ENST00000409854 MMP10P09238 476 aa6.62□□□□□ -1.35
EPHA4-202ENST00000409854 DDIT3P35638 169 aa6.62□□□□□ -1.35
EPHA4-202ENST00000409854 CREB3L3Q68CJ9 461 aa6.62□□□□□ -1.35
EPHA4-202ENST00000409854 CCDC129Q6ZRS4 1044 aa6.62□□□□□ -1.35
EPHA4-202ENST00000409854 CCDC125Q86Z20 511 aa6.62□□□□□ -1.35
EPHA4-202ENST00000409854 OSBP2Q969R2 916 aa6.62□□□□□ -1.35
EPHA4-202ENST00000409854 PARP3Q9Y6F1 533 aa6.62□□□□□ -1.35
EPHA4-202ENST00000409854 SLC27A2O14975 620 aa6.62□□□□□ -1.35
EPHA4-202ENST00000409854 SRGNP10124 158 aa6.62□□□□□ -1.35
EPHA4-202ENST00000409854 SLFNL1Q499Z3 407 aa6.62□□□□□ -1.35
EPHA4-202ENST00000409854 CAVIN4Q5BKX8 364 aa6.62□□□□□ -1.35
EPHA4-202ENST00000409854 TTC14Q96N46 770 aa6.62□□□□□ -1.35
EPHA4-202ENST00000409854 GNL3LQ9NVN8 582 aaKnown RBP6.62□□□□□ -1.35
EPHA4-202ENST00000409854 U3KPZ7 1027 aaPredicted RBP6.62□□□□□ -1.35
EPHA4-202ENST00000409854 C10orf71Q711Q0 1435 aa6.62□□□□□ -1.35
EPHA4-202ENST00000409854 FOXP2O15409 715 aa6.62□□□□□ -1.35
EPHA4-202ENST00000409854 KLRK1P26718 216 aa6.62□□□□□ -1.35
EPHA4-202ENST00000409854 GYG1P46976 350 aa6.62□□□□□ -1.35
EPHA4-202ENST00000409854 MCM2P49736 904 aa6.62□□□□□ -1.35
EPHA4-202ENST00000409854 SF3B2Q13435 895 aaKnown RBP6.62□□□□□ -1.35
EPHA4-202ENST00000409854 PRPF40BQ6NWY9 871 aaKnown RBP6.62□□□□□ -1.35
EPHA4-202ENST00000409854 DENND2AQ9ULE3 1009 aa6.62□□□□□ -1.35
EPHA4-202ENST00000409854 MYH2Q9UKX2 1941 aa6.61□□□□□ -1.35
EPHA4-202ENST00000409854 IGSF3O75054 1194 aa6.61□□□□□ -1.35
EPHA4-202ENST00000409854 HSPD1P10809 573 aaKnown RBP6.61□□□□□ -1.35
EPHA4-202ENST00000409854 NPR1P16066 1061 aa6.61□□□□□ -1.35
EPHA4-202ENST00000409854 PDE6AP16499 860 aa6.61□□□□□ -1.35
EPHA4-202ENST00000409854 PDE6BP35913 854 aa6.61□□□□□ -1.35
EPHA4-202ENST00000409854 DDX60LQ5H9U9 1706 aaKnown RBP6.61□□□□□ -1.35
EPHA4-202ENST00000409854 NEK4P51957 841 aa6.61□□□□□ -1.35
EPHA4-202ENST00000409854 GPSM2P81274 684 aa6.61□□□□□ -1.35
EPHA4-202ENST00000409854 RNF20Q5VTR2 975 aa6.61□□□□□ -1.35
EPHA4-202ENST00000409854 DEFB132Q7Z7B7 95 aa6.61□□□□□ -1.35
EPHA4-202ENST00000409854 SLC51AQ86UW1 340 aa6.61□□□□□ -1.35
EPHA4-202ENST00000409854 PUS7LQ9H0K6 701 aaKnown RBP6.61□□□□□ -1.35
EPHA4-202ENST00000409854 ZSWIM6Q9HCJ5 1215 aa6.61□□□□□ -1.35
EPHA4-202ENST00000409854 WWC3Q9ULE0 1092 aa6.61□□□□□ -1.35
EPHA4-202ENST00000409854 ZMYM6O95789 1325 aa6.61□□□□□ -1.35
EPHA4-202ENST00000409854 ZNF532Q9HCE3 1301 aa6.61□□□□□ -1.35
EPHA4-202ENST00000409854 BAZ2AQ9UIF9 1905 aaKnown RBP6.61□□□□□ -1.35
EPHA4-202ENST00000409854 SNED1Q8TER0 1413 aa6.61□□□□□ -1.35
EPHA4-202ENST00000409854 ZKSCAN1P17029 563 aaPredicted RBP6.6□□□□□ -1.35
EPHA4-202ENST00000409854 ATP2B4P23634 1241 aa6.6□□□□□ -1.35
EPHA4-202ENST00000409854 KCNJ4P48050 445 aa6.6□□□□□ -1.35
EPHA4-202ENST00000409854 MAP3K12Q12852 859 aa6.6□□□□□ -1.35
EPHA4-202ENST00000409854 ADCK5Q3MIX3 580 aa6.6□□□□□ -1.35
EPHA4-202ENST00000409854 SLC9C2Q5TAH2 1124 aa6.6□□□□□ -1.35
EPHA4-202ENST00000409854 VPS53Q5VIR6 699 aa6.6□□□□□ -1.35
EPHA4-202ENST00000409854 TMED8Q6PL24 325 aaPredicted RBP6.6□□□□□ -1.35
EPHA4-202ENST00000409854 SP8Q8IXZ3 490 aa6.6□□□□□ -1.35
EPHA4-202ENST00000409854 ALDH8A1Q9H2A2 487 aaPredicted RBP6.6□□□□□ -1.35
EPHA4-202ENST00000409854 NAV1Q8NEY1 1877 aa6.6□□□□□ -1.35
EPHA4-202ENST00000409854 ECM29Q5VYK3 1845 aa6.6□□□□□ -1.35
EPHA4-202ENST00000409854 SALL1Q9NSC2 1324 aa6.6□□□□□ -1.35
EPHA4-202ENST00000409854 PPEF1O14829 653 aaPredicted RBP6.6□□□□□ -1.35
EPHA4-202ENST00000409854 HIBADHP31937 336 aaKnown RBP6.6□□□□□ -1.35
EPHA4-202ENST00000409854 MSL1Q68DK7 614 aa6.6□□□□□ -1.35
EPHA4-202ENST00000409854 TXNRD3Q86VQ6 643 aa6.6□□□□□ -1.35
EPHA4-202ENST00000409854 ATP6V0A2Q9Y487 856 aa6.6□□□□□ -1.35
EPHA4-202ENST00000409854 GPAA1O43292 621 aa6.6□□□□□ -1.35
EPHA4-202ENST00000409854 IDH1O75874 414 aaKnown RBP6.6□□□□□ -1.35
EPHA4-202ENST00000409854 CYP21A2P08686 494 aa6.6□□□□□ -1.35
EPHA4-202ENST00000409854 KRT32Q14532 448 aa6.6□□□□□ -1.35
EPHA4-202ENST00000409854 NBR1Q14596 966 aa6.6□□□□□ -1.35
EPHA4-202ENST00000409854 STYK1Q6J9G0 422 aa6.6□□□□□ -1.35
EPHA4-202ENST00000409854 MASTLQ96GX5 879 aa6.6□□□□□ -1.35
EPHA4-202ENST00000409854 ALDH1B1P30837 517 aa6.59□□□□□ -1.35
EPHA4-202ENST00000409854 CUL4AQ13619 759 aa6.59□□□□□ -1.35
EPHA4-202ENST00000409854 WASHC4Q2M389 1173 aa6.59□□□□□ -1.35
EPHA4-202ENST00000409854 RUFY3Q7L099 469 aa6.59□□□□□ -1.35
EPHA4-202ENST00000409854 TDRD7Q8NHU6 1098 aaKnown RBP6.59□□□□□ -1.35
EPHA4-202ENST00000409854 SLC16A10Q8TF71 515 aa6.59□□□□□ -1.35
EPHA4-202ENST00000409854 UPF3BQ9BZI7 483 aaKnown RBP6.59□□□□□ -1.35
EPHA4-202ENST00000409854 ANKIB1Q9P2G1 1089 aa6.59□□□□□ -1.35
EPHA4-202ENST00000409854 TAF6LQ9Y6J9 622 aa6.59□□□□□ -1.35
EPHA4-202ENST00000409854 CASTP20810 708 aaKnown RBP6.59□□□□□ -1.35
EPHA4-202ENST00000409854 PSMA5P28066 241 aa6.59□□□□□ -1.35
EPHA4-202ENST00000409854 VPS37DQ86XT2 251 aa6.59□□□□□ -1.35
EPHA4-202ENST00000409854 MAGEB6Q8N7X4 407 aa6.59□□□□□ -1.35
EPHA4-202ENST00000409854 TBC1D16Q8TBP0 767 aa6.59□□□□□ -1.35
EPHA4-202ENST00000409854 JAKMIP1Q96N16 626 aaKnown RBP6.59□□□□□ -1.35
EPHA4-202ENST00000409854 GGA1Q9UJY5 639 aa6.59□□□□□ -1.35
EPHA4-202ENST00000409854 IL1R1P14778 569 aa6.59□□□□□ -1.36
EPHA4-202ENST00000409854 ALX1Q15699 326 aa6.59□□□□□ -1.36
EPHA4-202ENST00000409854 ZNF804AQ7Z570 1209 aa6.59□□□□□ -1.36
EPHA4-202ENST00000409854 STRBPQ96SI9 672 aaKnown RBP6.59□□□□□ -1.36
EPHA4-202ENST00000409854 CIZ1Q9ULV3 898 aaPredicted RBP6.59□□□□□ -1.36
EPHA4-202ENST00000409854 UFL1O94874 794 aa6.58□□□□□ -1.36
EPHA4-202ENST00000409854 STOX1Q6ZVD7 989 aa6.58□□□□□ -1.36
EPHA4-202ENST00000409854 ZNF384Q8TF68 577 aa6.58□□□□□ -1.36
EPHA4-202ENST00000409854 TMX3Q96JJ7 454 aa6.58□□□□□ -1.36
EPHA4-202ENST00000409854 POLLQ9UGP5 575 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms