RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 SUPT20HQ8NEM7 779 aa29.4■■■□□ 2.3
LRFN4-202ENST00000393952 MYH7P12883 1935 aa29.4■■■□□ 2.3
LRFN4-202ENST00000393952 DOCK2Q92608 1830 aa29.4■■■□□ 2.3
LRFN4-202ENST00000393952 RFX7Q2KHR2 1363 aa29.4■■■□□ 2.3
LRFN4-202ENST00000393952 IL1R1P14778 569 aa29.39■■■□□ 2.3
LRFN4-202ENST00000393952 CHAF1AQ13111 956 aaPredicted RBP29.39■■■□□ 2.3
LRFN4-202ENST00000393952 DIAPH3Q9NSV4 1193 aa29.39■■■□□ 2.3
LRFN4-202ENST00000393952 ARFGEF1Q9Y6D6 1849 aa29.39■■■□□ 2.3
LRFN4-202ENST00000393952 PDS5AQ29RF7 1337 aaKnown RBP29.39■■■□□ 2.3
LRFN4-202ENST00000393952 CHD4Q14839 1912 aa29.39■■■□□ 2.3
LRFN4-202ENST00000393952 PSMD1Q99460 953 aa29.39■■■□□ 2.29
LRFN4-202ENST00000393952 COA1Q9GZY4 146 aa29.39■■■□□ 2.29
LRFN4-202ENST00000393952 FER1L6Q2WGJ9 1857 aa29.38■■■□□ 2.29
LRFN4-202ENST00000393952 CHGBP05060 677 aa29.38■■■□□ 2.29
LRFN4-202ENST00000393952 DOK7Q18PE1 504 aa29.38■■■□□ 2.29
LRFN4-202ENST00000393952 JAG2Q9Y219 1238 aa29.38■■■□□ 2.29
LRFN4-202ENST00000393952 HIP1O00291 1037 aa29.37■■■□□ 2.29
LRFN4-202ENST00000393952 SYT17Q9BSW7 474 aa29.37■■■□□ 2.29
LRFN4-202ENST00000393952 NMIQ13287 307 aaPredicted RBP29.36■■■□□ 2.29
LRFN4-202ENST00000393952 AOC3Q16853 763 aa29.36■■■□□ 2.29
LRFN4-202ENST00000393952 CWC27Q6UX04 472 aaKnown RBP29.36■■■□□ 2.29
LRFN4-202ENST00000393952 ESYT1Q9BSJ8 1104 aa29.36■■■□□ 2.29
LRFN4-202ENST00000393952 IDH1O75874 414 aaKnown RBP29.35■■■□□ 2.29
LRFN4-202ENST00000393952 KIAA2012Q0VF49 1180 aa29.35■■■□□ 2.29
LRFN4-202ENST00000393952 FAM227BQ96M60 508 aa29.35■■■□□ 2.29
LRFN4-202ENST00000393952 G3V3G9 751 aa29.35■■■□□ 2.29
LRFN4-202ENST00000393952 SLFNL1Q499Z3 407 aa29.35■■■□□ 2.29
LRFN4-202ENST00000393952 DCAF8Q5TAQ9 597 aa29.35■■■□□ 2.29
LRFN4-202ENST00000393952 IL25Q9H293 177 aa29.35■■■□□ 2.29
LRFN4-202ENST00000393952 RNF113AO15541 343 aaKnown RBP29.34■■■□□ 2.29
LRFN4-202ENST00000393952 PPIP5K2O43314 1243 aa29.34■■■□□ 2.29
LRFN4-202ENST00000393952 TICAM2Q86XR7 235 aa29.34■■■□□ 2.29
LRFN4-202ENST00000393952 DBNDD1Q9H9R9 158 aa29.34■■■□□ 2.29
LRFN4-202ENST00000393952 ZNF277Q9NRM2 450 aaPredicted RBP29.34■■■□□ 2.29
LRFN4-202ENST00000393952 ABCF2Q9UG63 623 aa29.34■■■□□ 2.29
LRFN4-202ENST00000393952 A0A0D9SFI3 127 aa29.33■■■□□ 2.29
LRFN4-202ENST00000393952 MFAP1P55081 439 aaKnown RBP29.33■■■□□ 2.29
LRFN4-202ENST00000393952 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.33■■■□□ 2.29
LRFN4-202ENST00000393952 LRP2BPQ9P2M1 347 aa29.32■■■□□ 2.28
LRFN4-202ENST00000393952 NFKBIEO00221 500 aa29.31■■■□□ 2.28
LRFN4-202ENST00000393952 LRRFIP1Q32MZ4 808 aaKnown RBP29.31■■■□□ 2.28
LRFN4-202ENST00000393952 WDR66Q8TBY9 1149 aa29.31■■■□□ 2.28
LRFN4-202ENST00000393952 RUFY2Q8WXA3 655 aa29.31■■■□□ 2.28
LRFN4-202ENST00000393952 GOLGB1Q14789 3259 aaKnown RBP29.31■■■□□ 2.28
LRFN4-202ENST00000393952 SGSM2O43147 1006 aa29.3■■■□□ 2.28
LRFN4-202ENST00000393952 ECE2O60344 883 aa29.3■■■□□ 2.28
LRFN4-202ENST00000393952 ZFYP08048 801 aaPredicted RBP29.3■■■□□ 2.28
LRFN4-202ENST00000393952 MAP3K12Q12852 859 aa29.3■■■□□ 2.28
LRFN4-202ENST00000393952 SLC9C2Q5TAH2 1124 aa29.3■■■□□ 2.28
LRFN4-202ENST00000393952 TAOK3Q9H2K8 898 aa29.3■■■□□ 2.28
LRFN4-202ENST00000393952 FAM205AQ6ZU69 1335 aa29.3■■■□□ 2.28
LRFN4-202ENST00000393952 PDE6AP16499 860 aa29.3■■■□□ 2.28
LRFN4-202ENST00000393952 ADD2P35612 726 aa29.3■■■□□ 2.28
LRFN4-202ENST00000393952 ZSCAN25Q6NSZ9 544 aa29.3■■■□□ 2.28
LRFN4-202ENST00000393952 SALL1Q9NSC2 1324 aa29.29■■■□□ 2.28
LRFN4-202ENST00000393952 GTF2IP78347 998 aa29.29■■■□□ 2.28
LRFN4-202ENST00000393952 ZMYM1Q5SVZ6 1142 aa29.29■■■□□ 2.28
LRFN4-202ENST00000393952 PODNQ7Z5L7 613 aa29.29■■■□□ 2.28
LRFN4-202ENST00000393952 TSHZ2Q9NRE2 1034 aa29.29■■■□□ 2.28
LRFN4-202ENST00000393952 RAI14Q9P0K7 980 aa29.29■■■□□ 2.28
LRFN4-202ENST00000393952 SCN9AQ15858 1988 aa29.29■■■□□ 2.28
LRFN4-202ENST00000393952 COL4A5P29400 1685 aa29.28■■■□□ 2.28
LRFN4-202ENST00000393952 LARGE2Q8N3Y3 721 aa29.28■■■□□ 2.28
LRFN4-202ENST00000393952 SEC62Q99442 399 aaKnown RBP29.28■■■□□ 2.28
LRFN4-202ENST00000393952 ERICH6Q7L0X2 663 aa29.27■■■□□ 2.28
LRFN4-202ENST00000393952 MAGEB6Q8N7X4 407 aa29.27■■■□□ 2.28
LRFN4-202ENST00000393952 FBXW7Q969H0 707 aa29.27■■■□□ 2.28
LRFN4-202ENST00000393952 VPS33BQ9H267 617 aa29.27■■■□□ 2.28
LRFN4-202ENST00000393952 RAD50Q92878 1312 aa29.27■■■□□ 2.28
LRFN4-202ENST00000393952 PRDX5P30044 214 aa29.26■■■□□ 2.28
LRFN4-202ENST00000393952 IARSP41252 1262 aaKnown RBP29.26■■■□□ 2.28
LRFN4-202ENST00000393952 ZGPATQ8N5A5 531 aaKnown RBP29.26■■■□□ 2.28
LRFN4-202ENST00000393952 KCNQ5Q9NR82 932 aa29.26■■■□□ 2.28
LRFN4-202ENST00000393952 ZNF532Q9HCE3 1301 aa29.26■■■□□ 2.27
LRFN4-202ENST00000393952 CCDC88AQ3V6T2 1871 aa29.26■■■□□ 2.27
LRFN4-202ENST00000393952 TCRBV5S4A2TA0A5A2 114 aa29.26■■■□□ 2.27
LRFN4-202ENST00000393952 UBE3CQ15386 1083 aa29.26■■■□□ 2.27
LRFN4-202ENST00000393952 APPBP2Q92624 585 aa29.26■■■□□ 2.27
LRFN4-202ENST00000393952 HELLSQ9NRZ9 838 aa29.26■■■□□ 2.27
LRFN4-202ENST00000393952 MAST2Q6P0Q8 1798 aa29.25■■■□□ 2.27
LRFN4-202ENST00000393952 LTBP3Q9NS15 1303 aa29.25■■■□□ 2.27
LRFN4-202ENST00000393952 RASSF7Q02833 373 aa29.25■■■□□ 2.27
LRFN4-202ENST00000393952 GRIK5Q16478 980 aa29.25■■■□□ 2.27
LRFN4-202ENST00000393952 MCMDC2Q4G0Z9 681 aa29.25■■■□□ 2.27
LRFN4-202ENST00000393952 SPTY2D1Q68D10 685 aaPredicted RBP29.25■■■□□ 2.27
LRFN4-202ENST00000393952 TTLL5Q6EMB2 1281 aa29.25■■■□□ 2.27
LRFN4-202ENST00000393952 OSBP2Q969R2 916 aa29.25■■■□□ 2.27
LRFN4-202ENST00000393952 EIF5BO60841 1220 aaKnown RBP29.24■■■□□ 2.27
LRFN4-202ENST00000393952 REC8O95072 547 aa29.24■■■□□ 2.27
LRFN4-202ENST00000393952 MFSD14BQ5SR56 506 aa29.24■■■□□ 2.27
LRFN4-202ENST00000393952 CCDC129Q6ZRS4 1044 aa29.24■■■□□ 2.27
LRFN4-202ENST00000393952 ZNF589Q86UQ0 364 aaPredicted RBP29.24■■■□□ 2.27
LRFN4-202ENST00000393952 TBC1D22AQ8WUA7 517 aa29.24■■■□□ 2.27
LRFN4-202ENST00000393952 ANO2Q9NQ90 1003 aa29.24■■■□□ 2.27
LRFN4-202ENST00000393952 ZNF646O15015 1829 aaPredicted RBP29.24■■■□□ 2.27
LRFN4-202ENST00000393952 MAST3O60307 1309 aa29.24■■■□□ 2.27
LRFN4-202ENST00000393952 YDJCA8MPS7 323 aa29.23■■■□□ 2.27
LRFN4-202ENST00000393952 M0R2C6 588 aa29.23■■■□□ 2.27
LRFN4-202ENST00000393952 LDHBP07195 334 aaKnown RBP29.23■■■□□ 2.27
LRFN4-202ENST00000393952 ZNF384Q8TF68 577 aa29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms