RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 MYL10Q9BUA6 226 aa18.89■□□□□ 0.62
PHTF1-205ENST00000393357 DENND2AQ9ULE3 1009 aa18.89■□□□□ 0.62
PHTF1-205ENST00000393357 NPHP4O75161 1426 aaPredicted RBP18.89■□□□□ 0.61
PHTF1-205ENST00000393357 PHKBQ93100 1093 aa18.89■□□□□ 0.61
PHTF1-205ENST00000393357 ZNF594Q96JF6 807 aaPredicted RBP18.89■□□□□ 0.61
PHTF1-205ENST00000393357 H3BQF6 201 aa18.89■□□□□ 0.61
PHTF1-205ENST00000393357 PDIA3P30101 505 aaKnown RBP18.89■□□□□ 0.61
PHTF1-205ENST00000393357 NEXNQ0ZGT2 675 aa18.89■□□□□ 0.61
PHTF1-205ENST00000393357 XAGE3Q8WTP9 111 aa18.89■□□□□ 0.61
PHTF1-205ENST00000393357 RASSF4Q9H2L5 321 aa18.89■□□□□ 0.61
PHTF1-205ENST00000393357 L2HGDHQ9H9P8 463 aa18.89■□□□□ 0.61
PHTF1-205ENST00000393357 ADAM21Q9UKJ8 722 aa18.89■□□□□ 0.61
PHTF1-205ENST00000393357 PPP2R2CQ9Y2T4 447 aa18.89■□□□□ 0.61
PHTF1-205ENST00000393357 KIF28PB7ZC32 967 aa18.88■□□□□ 0.61
PHTF1-205ENST00000393357 CAVIN2O95810 425 aa18.88■□□□□ 0.61
PHTF1-205ENST00000393357 IBSPP21815 317 aaPredicted RBP18.88■□□□□ 0.61
PHTF1-205ENST00000393357 SYKP43405 635 aa18.88■□□□□ 0.61
PHTF1-205ENST00000393357 CC2D1AQ6P1N0 951 aaPredicted RBP18.88■□□□□ 0.61
PHTF1-205ENST00000393357 HMG20BQ9P0W2 317 aa18.88■□□□□ 0.61
PHTF1-205ENST00000393357 TADA3O75528 432 aa18.88■□□□□ 0.61
PHTF1-205ENST00000393357 APPP05067 770 aa18.88■□□□□ 0.61
PHTF1-205ENST00000393357 NFATC2IPQ8NCF5 419 aa18.88■□□□□ 0.61
PHTF1-205ENST00000393357 SRRTQ9BXP5 876 aaKnown RBP18.88■□□□□ 0.61
PHTF1-205ENST00000393357 ANKRD26Q9UPS8 1709 aa18.87■□□□□ 0.61
PHTF1-205ENST00000393357 E7EWF7 191 aa18.87■□□□□ 0.61
PHTF1-205ENST00000393357 AMOTL2Q9Y2J4 779 aa18.87■□□□□ 0.61
PHTF1-205ENST00000393357 PARP3Q9Y6F1 533 aa18.87■□□□□ 0.61
PHTF1-205ENST00000393357 U3KPZ7 1027 aaPredicted RBP18.87■□□□□ 0.61
PHTF1-205ENST00000393357 WDHD1O75717 1129 aaPredicted RBP18.87■□□□□ 0.61
PHTF1-205ENST00000393357 FDPSP14324 419 aaKnown RBP18.87■□□□□ 0.61
PHTF1-205ENST00000393357 TNNI3KQ59H18 835 aa18.87■□□□□ 0.61
PHTF1-205ENST00000393357 TRIM65Q6PJ69 517 aa18.87■□□□□ 0.61
PHTF1-205ENST00000393357 GPIHBP1Q8IV16 184 aa18.87■□□□□ 0.61
PHTF1-205ENST00000393357 LINC00301Q8NCQ3 95 aa18.87■□□□□ 0.61
PHTF1-205ENST00000393357 OSBPL5Q9H0X9 879 aaPredicted RBP18.87■□□□□ 0.61
PHTF1-205ENST00000393357 FPGT-TNNI3KV9GXZ4 949 aa18.87■□□□□ 0.61
PHTF1-205ENST00000393357 GPATCH11Q8N954 259 aa18.86■□□□□ 0.61
PHTF1-205ENST00000393357 PFKFB2O60825 505 aa18.86■□□□□ 0.61
PHTF1-205ENST00000393357 IGKV5-2P06315 115 aa18.86■□□□□ 0.61
PHTF1-205ENST00000393357 CCDC93Q567U6 631 aa18.86■□□□□ 0.61
PHTF1-205ENST00000393357 TXLNBQ8N3L3 684 aa18.86■□□□□ 0.61
PHTF1-205ENST00000393357 BAG1Q99933 345 aaPredicted RBP18.86■□□□□ 0.61
PHTF1-205ENST00000393357 ADALQ6DHV7 355 aa18.85■□□□□ 0.61
PHTF1-205ENST00000393357 OLFM4Q6UX06 510 aa18.85■□□□□ 0.61
PHTF1-205ENST00000393357 MICU3Q86XE3 530 aa18.85■□□□□ 0.61
PHTF1-205ENST00000393357 ARHGEF10O15013 1369 aa18.85■□□□□ 0.61
PHTF1-205ENST00000393357 PES1O00541 588 aaKnown RBP18.85■□□□□ 0.61
PHTF1-205ENST00000393357 LRRFIP1Q32MZ4 808 aaKnown RBP18.85■□□□□ 0.61
PHTF1-205ENST00000393357 KCNB2Q92953 911 aa18.85■□□□□ 0.61
PHTF1-205ENST00000393357 SBNO1A3KN83 1393 aa18.85■□□□□ 0.61
PHTF1-205ENST00000393357 VWA3AA6NCI4 1184 aa18.85■□□□□ 0.61
PHTF1-205ENST00000393357 LTKP29376 864 aa18.85■□□□□ 0.61
PHTF1-205ENST00000393357 CASP1P29466 404 aa18.85■□□□□ 0.61
PHTF1-205ENST00000393357 FAM69CQ0P6D2 419 aa18.85■□□□□ 0.61
PHTF1-205ENST00000393357 NCAPHQ15003 741 aa18.85■□□□□ 0.61
PHTF1-205ENST00000393357 E2F4Q16254 413 aa18.85■□□□□ 0.61
PHTF1-205ENST00000393357 LONRF2Q1L5Z9 754 aa18.85■□□□□ 0.61
PHTF1-205ENST00000393357 LEKR1Q6ZMV7 388 aa18.85■□□□□ 0.61
PHTF1-205ENST00000393357 A0A087WZG4 1122 aa18.84■□□□□ 0.61
PHTF1-205ENST00000393357 ZRANB2O95218 330 aaKnown RBP eCLIP18.84■□□□□ 0.61
PHTF1-205ENST00000393357 NLRP12P59046 1061 aa18.84■□□□□ 0.61
PHTF1-205ENST00000393357 CMTR1Q8N1G2 835 aaKnown RBP18.84■□□□□ 0.61
PHTF1-205ENST00000393357 CNNM3Q8NE01 707 aa18.84■□□□□ 0.61
PHTF1-205ENST00000393357 AK7Q96M32 723 aa18.84■□□□□ 0.61
PHTF1-205ENST00000393357 DRC1Q96MC2 740 aa18.84■□□□□ 0.61
PHTF1-205ENST00000393357 CARMIL3Q8ND23 1372 aa18.84■□□□□ 0.61
PHTF1-205ENST00000393357 MROH7-TTC4A0A0A0MT08 1334 aa18.84■□□□□ 0.61
PHTF1-205ENST00000393357 SOWAHDA6NJG2 315 aa18.84■□□□□ 0.61
PHTF1-205ENST00000393357 ZMYND10O75800 440 aa18.84■□□□□ 0.61
PHTF1-205ENST00000393357 CDC27P30260 824 aa18.84■□□□□ 0.61
PHTF1-205ENST00000393357 KIF4BQ2VIQ3 1234 aa18.84■□□□□ 0.61
PHTF1-205ENST00000393357 LMBR1LQ6UX01 489 aa18.84■□□□□ 0.61
PHTF1-205ENST00000393357 REXO1L1PQ8IX06 675 aa18.84■□□□□ 0.61
PHTF1-205ENST00000393357 LINS1Q8NG48 757 aa18.84■□□□□ 0.61
PHTF1-205ENST00000393357 FAN1Q9Y2M0 1017 aa18.84■□□□□ 0.61
PHTF1-205ENST00000393357 ZNF609O15014 1411 aa18.84■□□□□ 0.61
PHTF1-205ENST00000393357 PSDA5PKW4 1024 aaPredicted RBP18.83■□□□□ 0.61
PHTF1-205ENST00000393357 DDX58O95786 925 aaKnown RBP18.83■□□□□ 0.61
PHTF1-205ENST00000393357 PDE4BQ07343 736 aa18.83■□□□□ 0.61
PHTF1-205ENST00000393357 SART3Q15020 963 aaKnown RBP18.83■□□□□ 0.61
PHTF1-205ENST00000393357 MYSM1Q5VVJ2 828 aa18.83■□□□□ 0.61
PHTF1-205ENST00000393357 PI16Q6UXB8 463 aa18.83■□□□□ 0.61
PHTF1-205ENST00000393357 STAMQ92783 540 aa18.83■□□□□ 0.61
PHTF1-205ENST00000393357 INCENPQ9NQS7 918 aa18.83■□□□□ 0.61
PHTF1-205ENST00000393357 GIGYF1O75420 1035 aaPredicted RBP18.83■□□□□ 0.61
PHTF1-205ENST00000393357 DHX37Q8IY37 1157 aaKnown RBP18.83■□□□□ 0.61
PHTF1-205ENST00000393357 ALDH1L1O75891 902 aa18.83■□□□□ 0.6
PHTF1-205ENST00000393357 RGS22Q8NE09 1264 aa18.83■□□□□ 0.6
PHTF1-205ENST00000393357 IMPACTQ9P2X3 320 aa18.83■□□□□ 0.6
PHTF1-205ENST00000393357 RRP15Q9Y3B9 282 aaKnown RBP18.83■□□□□ 0.6
PHTF1-205ENST00000393357 USP6P35125 1406 aa18.83■□□□□ 0.6
PHTF1-205ENST00000393357 NAA16Q6N069 864 aaPredicted RBP18.82■□□□□ 0.6
PHTF1-205ENST00000393357 MYL5Q02045 173 aa18.82■□□□□ 0.6
PHTF1-205ENST00000393357 ZNF569Q5MCW4 686 aa18.82■□□□□ 0.6
PHTF1-205ENST00000393357 SMARCC2Q8TAQ2 1214 aa18.82■□□□□ 0.6
PHTF1-205ENST00000393357 FAM53CQ9NYF3 392 aa18.82■□□□□ 0.6
PHTF1-205ENST00000393357 PCDHA5Q9Y5H7 936 aa18.82■□□□□ 0.6
PHTF1-205ENST00000393357 EFCAB8A8MWE9 144 aa18.81■□□□□ 0.6
PHTF1-205ENST00000393357 TULP2O00295 520 aa18.81■□□□□ 0.6
PHTF1-205ENST00000393357 HSPD1P10809 573 aaKnown RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms