RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 TCHPQ9BT92 498 aa7.62□□□□□ -1.19
NEDD9-202ENST00000379446 NSD2O96028 1365 aa7.62□□□□□ -1.19
NEDD9-202ENST00000379446 SETD1BQ9UPS6 1966 aaKnown RBP7.62□□□□□ -1.19
NEDD9-202ENST00000379446 MAGEB6P1A0A0J9YX57 407 aa7.62□□□□□ -1.19
NEDD9-202ENST00000379446 PRAMEF18Q5VWM3 479 aa7.62□□□□□ -1.19
NEDD9-202ENST00000379446 MAPKAPK5Q8IW41 473 aa7.62□□□□□ -1.19
NEDD9-202ENST00000379446 C8orf58Q8NAV2 365 aa7.62□□□□□ -1.19
NEDD9-202ENST00000379446 LINS1Q8NG48 757 aa7.62□□□□□ -1.19
NEDD9-202ENST00000379446 WRNIP1Q96S55 665 aa7.62□□□□□ -1.19
NEDD9-202ENST00000379446 TSPYL2Q9H2G4 693 aaPredicted RBP7.62□□□□□ -1.19
NEDD9-202ENST00000379446 GGA3Q9NZ52 723 aa7.62□□□□□ -1.19
NEDD9-202ENST00000379446 AXIN2Q9Y2T1 843 aa7.62□□□□□ -1.19
NEDD9-202ENST00000379446 CD2APQ9Y5K6 639 aa7.62□□□□□ -1.19
NEDD9-202ENST00000379446 XDHP47989 1333 aa7.61□□□□□ -1.19
NEDD9-202ENST00000379446 MAP2K1Q02750 393 aaPredicted RBP7.61□□□□□ -1.19
NEDD9-202ENST00000379446 ALDH1L2Q3SY69 923 aa7.61□□□□□ -1.19
NEDD9-202ENST00000379446 SLC9C1Q4G0N8 1177 aa7.61□□□□□ -1.19
NEDD9-202ENST00000379446 SLC9C2Q5TAH2 1124 aa7.61□□□□□ -1.19
NEDD9-202ENST00000379446 CCDC191Q8NCU4 936 aa7.61□□□□□ -1.19
NEDD9-202ENST00000379446 EFCC1Q9HA90 598 aa7.61□□□□□ -1.19
NEDD9-202ENST00000379446 NDUFB9Q9Y6M9 179 aa7.61□□□□□ -1.19
NEDD9-202ENST00000379446 CRB1P82279 1406 aa7.61□□□□□ -1.19
NEDD9-202ENST00000379446 ST18O60284 1047 aa7.61□□□□□ -1.19
NEDD9-202ENST00000379446 FLOT1O75955 427 aa7.61□□□□□ -1.19
NEDD9-202ENST00000379446 IGFBP4P22692 258 aa7.61□□□□□ -1.19
NEDD9-202ENST00000379446 IL15P40933 162 aaPredicted RBP7.61□□□□□ -1.19
NEDD9-202ENST00000379446 CSPP1Q1MSJ5 1256 aa7.61□□□□□ -1.19
NEDD9-202ENST00000379446 RETREG2Q8NC44 543 aa7.61□□□□□ -1.19
NEDD9-202ENST00000379446 GBA2Q9HCG7 927 aaPredicted RBP7.61□□□□□ -1.19
NEDD9-202ENST00000379446 ZNRF3Q9ULT6 936 aa7.61□□□□□ -1.19
NEDD9-202ENST00000379446 PRAMEF22A3QJZ6 481 aa7.61□□□□□ -1.19
NEDD9-202ENST00000379446 MYCLP12524 364 aaPredicted RBP7.61□□□□□ -1.19
NEDD9-202ENST00000379446 TGFB2P61812 414 aa7.61□□□□□ -1.19
NEDD9-202ENST00000379446 CCDC174Q6PII3 467 aa7.61□□□□□ -1.19
NEDD9-202ENST00000379446 ZBTB21Q9ULJ3 1066 aa7.61□□□□□ -1.19
NEDD9-202ENST00000379446 KIF1BPQ96EK5 621 aa7.6□□□□□ -1.19
NEDD9-202ENST00000379446 ZNF594Q96JF6 807 aaPredicted RBP7.6□□□□□ -1.19
NEDD9-202ENST00000379446 ELP3Q9H9T3 547 aa7.6□□□□□ -1.19
NEDD9-202ENST00000379446 PNPLA6Q8IY17 1366 aa7.6□□□□□ -1.19
NEDD9-202ENST00000379446 UBE2Q2LH0YL09 131 aa7.6□□□□□ -1.19
NEDD9-202ENST00000379446 TXLNAP40222 546 aa7.6□□□□□ -1.19
NEDD9-202ENST00000379446 GMPSP49915 693 aaPredicted RBP7.6□□□□□ -1.19
NEDD9-202ENST00000379446 NLRP5P59047 1200 aa7.6□□□□□ -1.19
NEDD9-202ENST00000379446 ZBTB12Q9Y330 459 aaPredicted RBP7.6□□□□□ -1.19
NEDD9-202ENST00000379446 LAMC1P11047 1609 aa7.6□□□□□ -1.19
NEDD9-202ENST00000379446 VPS37CA5D8V6 355 aaPredicted RBP7.6□□□□□ -1.19
NEDD9-202ENST00000379446 IFIT3O14879 490 aaKnown RBP7.6□□□□□ -1.19
NEDD9-202ENST00000379446 VAMP4O75379 141 aa7.6□□□□□ -1.19
NEDD9-202ENST00000379446 NEBLO76041 1014 aa7.6□□□□□ -1.19
NEDD9-202ENST00000379446 HAND2P61296 217 aa7.6□□□□□ -1.19
NEDD9-202ENST00000379446 SKOR2Q2VWA4 1001 aaPredicted RBP7.6□□□□□ -1.19
NEDD9-202ENST00000379446 INTS3Q68E01 1043 aaKnown RBP7.6□□□□□ -1.19
NEDD9-202ENST00000379446 FCHSD1Q86WN1 690 aa7.6□□□□□ -1.19
NEDD9-202ENST00000379446 MRPL50Q8N5N7 158 aaKnown RBP7.6□□□□□ -1.19
NEDD9-202ENST00000379446 TSC1Q92574 1164 aa7.6□□□□□ -1.19
NEDD9-202ENST00000379446 ANTXR1Q9H6X2 564 aa7.6□□□□□ -1.19
NEDD9-202ENST00000379446 SBNO2Q9Y2G9 1366 aa7.6□□□□□ -1.19
NEDD9-202ENST00000379446 SOS2Q07890 1332 aaPredicted RBP7.6□□□□□ -1.19
NEDD9-202ENST00000379446 IQSEC2Q5JU85 1478 aa7.6□□□□□ -1.19
NEDD9-202ENST00000379446 ZNF213O14771 459 aa7.6□□□□□ -1.19
NEDD9-202ENST00000379446 KIF5BP33176 963 aa7.6□□□□□ -1.19
NEDD9-202ENST00000379446 BMP2KLQ5H9B9 411 aa7.6□□□□□ -1.19
NEDD9-202ENST00000379446 ANGEL2Q5VTE6 544 aaKnown RBP7.6□□□□□ -1.19
NEDD9-202ENST00000379446 TSHZ3Q63HK5 1081 aa7.6□□□□□ -1.19
NEDD9-202ENST00000379446 CHADLQ6NUI6 762 aa7.6□□□□□ -1.19
NEDD9-202ENST00000379446 APOBEC3FQ8IUX4 373 aaKnown RBP7.6□□□□□ -1.19
NEDD9-202ENST00000379446 ABI1Q8IZP0 508 aa7.6□□□□□ -1.19
NEDD9-202ENST00000379446 CCDC102AQ96A19 550 aa7.6□□□□□ -1.19
NEDD9-202ENST00000379446 KIFC2Q96AC6 838 aa7.6□□□□□ -1.19
NEDD9-202ENST00000379446 PLEKHF1Q96S99 279 aa7.6□□□□□ -1.19
NEDD9-202ENST00000379446 DNAI2Q9GZS0 605 aa7.6□□□□□ -1.19
NEDD9-202ENST00000379446 BMP2KQ9NSY1 1161 aaPredicted RBP7.6□□□□□ -1.19
NEDD9-202ENST00000379446 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.6□□□□□ -1.193e-15■■□□□ 11.6
NEDD9-202ENST00000379446 IL16Q14005 1332 aa7.59□□□□□ -1.19
NEDD9-202ENST00000379446 KIF28PB7ZC32 967 aa7.59□□□□□ -1.19
NEDD9-202ENST00000379446 GYG1P46976 350 aa7.59□□□□□ -1.19
NEDD9-202ENST00000379446 ZSCAN30Q86W11 494 aa7.59□□□□□ -1.19
NEDD9-202ENST00000379446 NMRK2Q9NPI5 230 aa7.59□□□□□ -1.19
NEDD9-202ENST00000379446 AATFQ9NY61 560 aaKnown RBP eCLIP7.59□□□□□ -1.19
NEDD9-202ENST00000379446 MYOM2P54296 1465 aa7.59□□□□□ -1.19
NEDD9-202ENST00000379446 ZNF804BA4D1E1 1349 aa7.59□□□□□ -1.19
NEDD9-202ENST00000379446 ZEB2O60315 1214 aa7.59□□□□□ -1.19
NEDD9-202ENST00000379446 DHX8Q14562 1220 aaKnown RBP7.59□□□□□ -1.19
NEDD9-202ENST00000379446 GRIPAP1Q4V328 841 aa7.59□□□□□ -1.19
NEDD9-202ENST00000379446 MFSD14CQ5VZR4 134 aa7.59□□□□□ -1.19
NEDD9-202ENST00000379446 CWC27Q6UX04 472 aaKnown RBP7.59□□□□□ -1.19
NEDD9-202ENST00000379446 MAGEB6Q8N7X4 407 aa7.59□□□□□ -1.19
NEDD9-202ENST00000379446 STK24Q9Y6E0 443 aa7.59□□□□□ -1.19
NEDD9-202ENST00000379446 MAP3K4Q9Y6R4 1608 aa7.59□□□□□ -1.19
NEDD9-202ENST00000379446 SPHKAPQ2M3C7 1700 aa7.59□□□□□ -1.19
NEDD9-202ENST00000379446 PRR36Q9H6K5 1346 aa7.59□□□□□ -1.19
NEDD9-202ENST00000379446 FAM135BQ49AJ0 1406 aa7.59□□□□□ -1.19
NEDD9-202ENST00000379446 ECE2O60344 883 aa7.59□□□□□ -1.19
NEDD9-202ENST00000379446 APLP1P51693 650 aa7.59□□□□□ -1.19
NEDD9-202ENST00000379446 CATIPQ7Z7H3 387 aa7.59□□□□□ -1.19
NEDD9-202ENST00000379446 TRERF1Q96PN7 1200 aa7.59□□□□□ -1.19
NEDD9-202ENST00000379446 LRFN2Q9ULH4 789 aa7.59□□□□□ -1.19
NEDD9-202ENST00000379446 SCAF8Q9UPN6 1271 aaKnown RBP7.59□□□□□ -1.19
NEDD9-202ENST00000379446 ZHX2Q9Y6X8 837 aa7.59□□□□□ -1.19
NEDD9-202ENST00000379446 ABCA6Q8N139 1617 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms