RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 EIF3JO75822 258 aaKnown RBP22.52■■□□□ 1.2
PCDH8-202ENST00000377942 CHMP4BP1P59074 171 aa22.52■■□□□ 1.19
PCDH8-202ENST00000377942 AXDND1Q5T1B0 1012 aaPredicted RBP22.52■■□□□ 1.19
PCDH8-202ENST00000377942 KDM5CP41229 1560 aa22.51■■□□□ 1.19
PCDH8-202ENST00000377942 STAT6P42226 847 aa22.51■■□□□ 1.19
PCDH8-202ENST00000377942 ATL3Q6DD88 541 aa22.51■■□□□ 1.19
PCDH8-202ENST00000377942 SYCP3Q8IZU3 236 aa22.51■■□□□ 1.19
PCDH8-202ENST00000377942 SUPT20HQ8NEM7 779 aa22.51■■□□□ 1.19
PCDH8-202ENST00000377942 ABCC3O15438 1527 aa22.51■■□□□ 1.19
PCDH8-202ENST00000377942 SPAG1Q07617 926 aa22.51■■□□□ 1.19
PCDH8-202ENST00000377942 FLAD1Q8NFF5 587 aa22.51■■□□□ 1.19
PCDH8-202ENST00000377942 ABCC4O15439 1325 aa22.51■■□□□ 1.19
PCDH8-202ENST00000377942 PTPDC1A2A3K4 754 aa22.5■■□□□ 1.19
PCDH8-202ENST00000377942 KRT2P35908 639 aa22.5■■□□□ 1.19
PCDH8-202ENST00000377942 SPTLC2O15270 562 aa22.5■■□□□ 1.19
PCDH8-202ENST00000377942 PRDM15P57071 1507 aaPredicted RBP22.5■■□□□ 1.19
PCDH8-202ENST00000377942 KDRP35968 1356 aa22.5■■□□□ 1.19
PCDH8-202ENST00000377942 SPDYE3A6NKU9 549 aa22.5■■□□□ 1.19
PCDH8-202ENST00000377942 H0YIN7 160 aa22.5■■□□□ 1.19
PCDH8-202ENST00000377942 IGSF1Q8N6C5 1336 aa22.5■■□□□ 1.19
PCDH8-202ENST00000377942 PNMA6EA0A0J9YXQ4 647 aa22.5■■□□□ 1.19
PCDH8-202ENST00000377942 UBXN4Q92575 508 aa22.5■■□□□ 1.19
PCDH8-202ENST00000377942 ZNF594Q96JF6 807 aaPredicted RBP22.5■■□□□ 1.19
PCDH8-202ENST00000377942 CNPY2Q9Y2B0 182 aa22.5■■□□□ 1.19
PCDH8-202ENST00000377942 TCERG1LQ5VWI1 586 aa22.49■■□□□ 1.19
PCDH8-202ENST00000377942 SSR1P43307 286 aaKnown RBP22.49■■□□□ 1.19
PCDH8-202ENST00000377942 TDRD12Q587J7 1177 aaKnown RBP22.49■■□□□ 1.19
PCDH8-202ENST00000377942 KIF18AQ8NI77 898 aa22.49■■□□□ 1.19
PCDH8-202ENST00000377942 KLHDC4Q8TBB5 520 aa22.49■■□□□ 1.19
PCDH8-202ENST00000377942 NAP1L4Q99733 375 aaKnown RBP22.49■■□□□ 1.19
PCDH8-202ENST00000377942 TET3O43151 1660 aa22.49■■□□□ 1.19
PCDH8-202ENST00000377942 KDM6BO15054 1643 aa22.48■■□□□ 1.19
PCDH8-202ENST00000377942 USP48Q86UV5 1035 aa22.48■■□□□ 1.19
PCDH8-202ENST00000377942 GBP3Q9H0R5 595 aa22.48■■□□□ 1.19
PCDH8-202ENST00000377942 TRIM47Q96LD4 638 aa22.48■■□□□ 1.19
PCDH8-202ENST00000377942 USP37Q86T82 979 aa22.48■■□□□ 1.19
PCDH8-202ENST00000377942 SGSM2O43147 1006 aa22.48■■□□□ 1.19
PCDH8-202ENST00000377942 LRSAM1Q6UWE0 723 aa22.48■■□□□ 1.19
PCDH8-202ENST00000377942 TSPOAP1O95153 1857 aa22.47■■□□□ 1.19
PCDH8-202ENST00000377942 DPP8Q6V1X1 898 aaPredicted RBP22.47■■□□□ 1.19
PCDH8-202ENST00000377942 GOLGA6L9A6NEM1 432 aa22.47■■□□□ 1.19
PCDH8-202ENST00000377942 RPS6KB1P23443 525 aa22.47■■□□□ 1.19
PCDH8-202ENST00000377942 CHST3Q7LGC8 479 aa22.47■■□□□ 1.19
PCDH8-202ENST00000377942 LMOD1P29536 600 aaPredicted RBP22.47■■□□□ 1.19
PCDH8-202ENST00000377942 TBC1D22AQ8WUA7 517 aa22.47■■□□□ 1.19
PCDH8-202ENST00000377942 CTAGE1Q96RT6 745 aa22.47■■□□□ 1.19
PCDH8-202ENST00000377942 PARP1P09874 1014 aaKnown RBP22.47■■□□□ 1.19
PCDH8-202ENST00000377942 ALDH1B1P30837 517 aa22.47■■□□□ 1.19
PCDH8-202ENST00000377942 CLEC11AQ9Y240 323 aa22.47■■□□□ 1.19
PCDH8-202ENST00000377942 SSH3Q8TE77 659 aa22.46■■□□□ 1.19
PCDH8-202ENST00000377942 GPAA1O43292 621 aa22.46■■□□□ 1.19
PCDH8-202ENST00000377942 KRT79Q5XKE5 535 aa22.46■■□□□ 1.19
PCDH8-202ENST00000377942 CWC15Q9P013 229 aaKnown RBP22.46■■□□□ 1.19
PCDH8-202ENST00000377942 ATP5JP18859 108 aa22.46■■□□□ 1.19
PCDH8-202ENST00000377942 DNM1Q05193 864 aaKnown RBP22.46■■□□□ 1.19
PCDH8-202ENST00000377942 RRAGBQ5VZM2 374 aa22.46■■□□□ 1.19
PCDH8-202ENST00000377942 TMC6Q7Z403 805 aa22.46■■□□□ 1.19
PCDH8-202ENST00000377942 ZSCAN23Q3MJ62 389 aa22.46■■□□□ 1.19
PCDH8-202ENST00000377942 RBM26Q5T8P6 1007 aaKnown RBP22.46■■□□□ 1.19
PCDH8-202ENST00000377942 OTUD7AQ8TE49 926 aaPredicted RBP22.46■■□□□ 1.19
PCDH8-202ENST00000377942 PLEKHF1Q96S99 279 aa22.46■■□□□ 1.19
PCDH8-202ENST00000377942 FBXO3Q9UK99 471 aa22.46■■□□□ 1.19
PCDH8-202ENST00000377942 SLC27A2O14975 620 aa22.45■■□□□ 1.18
PCDH8-202ENST00000377942 NEFHP12036 1026 aa22.45■■□□□ 1.18
PCDH8-202ENST00000377942 BAG6P46379 1132 aa22.45■■□□□ 1.18
PCDH8-202ENST00000377942 RPS8P62241 208 aaKnown RBP22.45■■□□□ 1.18
PCDH8-202ENST00000377942 KIF4BQ2VIQ3 1234 aa22.45■■□□□ 1.18
PCDH8-202ENST00000377942 CPLX3Q8WVH0 158 aa22.45■■□□□ 1.18
PCDH8-202ENST00000377942 N4BP3O15049 544 aa22.45■■□□□ 1.18
PCDH8-202ENST00000377942 PDE6BP35913 854 aa22.45■■□□□ 1.18
PCDH8-202ENST00000377942 LLPHQ9BRT6 129 aaKnown RBP22.45■■□□□ 1.18
PCDH8-202ENST00000377942 PSMA7O14818 248 aa22.45■■□□□ 1.18
PCDH8-202ENST00000377942 USP44Q9H0E7 712 aa22.45■■□□□ 1.18
PCDH8-202ENST00000377942 JAG2Q9Y219 1238 aa22.45■■□□□ 1.18
PCDH8-202ENST00000377942 RNF123Q5XPI4 1314 aa22.44■■□□□ 1.18
PCDH8-202ENST00000377942 ADCY10Q96PN6 1610 aa22.44■■□□□ 1.18
PCDH8-202ENST00000377942 NEBLO76041 1014 aa22.44■■□□□ 1.18
PCDH8-202ENST00000377942 ADCY5O95622 1261 aa22.44■■□□□ 1.18
PCDH8-202ENST00000377942 APBA3O96018 575 aa22.44■■□□□ 1.18
PCDH8-202ENST00000377942 PPP2R5BQ15173 497 aa22.44■■□□□ 1.18
PCDH8-202ENST00000377942 CCDC172P0C7W6 258 aa22.44■■□□□ 1.18
PCDH8-202ENST00000377942 CTSWP56202 376 aa22.44■■□□□ 1.18
PCDH8-202ENST00000377942 GIMAP6Q6P9H5 292 aa22.44■■□□□ 1.18
PCDH8-202ENST00000377942 CCDC174Q6PII3 467 aa22.44■■□□□ 1.18
PCDH8-202ENST00000377942 PCCAP05165 728 aaPredicted RBP22.44■■□□□ 1.18
PCDH8-202ENST00000377942 LIG1P18858 919 aa22.44■■□□□ 1.18
PCDH8-202ENST00000377942 SEPT7Q16181 437 aaKnown RBP22.44■■□□□ 1.18
PCDH8-202ENST00000377942 SPATA5Q8NB90 893 aa22.44■■□□□ 1.18
PCDH8-202ENST00000377942 ARMT1Q9H993 441 aa22.44■■□□□ 1.18
PCDH8-202ENST00000377942 KCNQ3O43525 872 aa22.44■■□□□ 1.18
PCDH8-202ENST00000377942 SKIDA1Q1XH10 827 aa22.44■■□□□ 1.18
PCDH8-202ENST00000377942 DACT1Q9NYF0 836 aa22.44■■□□□ 1.18
PCDH8-202ENST00000377942 ANKARQ7Z5J8 1434 aa22.43■■□□□ 1.18
PCDH8-202ENST00000377942 MARCKSP29966 332 aaPredicted RBP22.43■■□□□ 1.18
PCDH8-202ENST00000377942 AFMP43652 599 aa22.43■■□□□ 1.18
PCDH8-202ENST00000377942 KDM2BQ8NHM5 1336 aa22.43■■□□□ 1.18
PCDH8-202ENST00000377942 IBSPP21815 317 aaPredicted RBP22.43■■□□□ 1.18
PCDH8-202ENST00000377942 FAM200AQ8TCP9 573 aa22.43■■□□□ 1.18
PCDH8-202ENST00000377942 PAFAH1B1P43034 410 aa22.43■■□□□ 1.18
PCDH8-202ENST00000377942 RAB3GAP1Q15042 981 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms