RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 FAM13AO94988 1023 aa19.51■□□□□ 0.71
MCF2L-203ENST00000375604 KRT13P13646 458 aa19.51■□□□□ 0.71
MCF2L-203ENST00000375604 SPAG5Q96R06 1193 aa19.51■□□□□ 0.71
MCF2L-203ENST00000375604 CTDSPL2Q05D32 466 aa19.51■□□□□ 0.71
MCF2L-203ENST00000375604 C6orf50Q9HD87 102 aa19.51■□□□□ 0.71
MCF2L-203ENST00000375604 RMND1Q9NWS8 449 aa19.51■□□□□ 0.71
MCF2L-203ENST00000375604 PTPDC1A2A3K4 754 aa19.51■□□□□ 0.71
MCF2L-203ENST00000375604 SORBS3O60504 671 aa19.51■□□□□ 0.71
MCF2L-203ENST00000375604 GBP3Q9H0R5 595 aa19.51■□□□□ 0.71
MCF2L-203ENST00000375604 OTUD6BQ8N6M0 293 aa19.51■□□□□ 0.71
MCF2L-203ENST00000375604 MRPS27Q92552 414 aaKnown RBP19.51■□□□□ 0.71
MCF2L-203ENST00000375604 FLT4P35916 1363 aa19.51■□□□□ 0.71
MCF2L-203ENST00000375604 ARL1P40616 181 aaPredicted RBP19.51■□□□□ 0.71
MCF2L-203ENST00000375604 KARSQ15046 597 aaKnown RBP19.51■□□□□ 0.71
MCF2L-203ENST00000375604 TICAM2Q86XR7 235 aa19.51■□□□□ 0.71
MCF2L-203ENST00000375604 AATFQ9NY61 560 aaKnown RBP eCLIP19.51■□□□□ 0.71
MCF2L-203ENST00000375604 HOMER2Q9NSB8 354 aa19.51■□□□□ 0.71
MCF2L-203ENST00000375604 BIN2Q9UBW5 565 aaPredicted RBP19.51■□□□□ 0.71
MCF2L-203ENST00000375604 PRDM1O75626 825 aa19.5■□□□□ 0.71
MCF2L-203ENST00000375604 CCDC50Q8IVM0 306 aa19.5■□□□□ 0.71
MCF2L-203ENST00000375604 PROCA1Q8NCQ7 364 aaPredicted RBP19.5■□□□□ 0.71
MCF2L-203ENST00000375604 FCHSD1Q86WN1 690 aa19.5■□□□□ 0.71
MCF2L-203ENST00000375604 SMIM23A6NLE4 172 aa19.5■□□□□ 0.71
MCF2L-203ENST00000375604 GTF2F1P35269 517 aaKnown RBP eCLIP19.5■□□□□ 0.712e-6■■■■□ 22.9
MCF2L-203ENST00000375604 GSDMDP57764 484 aa19.5■□□□□ 0.71
MCF2L-203ENST00000375604 DCAF17Q5H9S7 520 aaPredicted RBP19.5■□□□□ 0.71
MCF2L-203ENST00000375604 LRSAM1Q6UWE0 723 aa19.5■□□□□ 0.71
MCF2L-203ENST00000375604 PRAG1Q86YV5 1406 aa19.5■□□□□ 0.71
MCF2L-203ENST00000375604 INCENPQ9NQS7 918 aa19.5■□□□□ 0.71
MCF2L-203ENST00000375604 RUFY3Q7L099 469 aa19.49■□□□□ 0.71
MCF2L-203ENST00000375604 MYL10Q9BUA6 226 aa19.49■□□□□ 0.71
MCF2L-203ENST00000375604 UBXN1Q04323 297 aa19.49■□□□□ 0.71
MCF2L-203ENST00000375604 LETM2Q2VYF4 491 aa19.49■□□□□ 0.71
MCF2L-203ENST00000375604 CNBD1Q8NA66 436 aa19.49■□□□□ 0.71
MCF2L-203ENST00000375604 MAP3K19Q56UN5 1328 aa19.49■□□□□ 0.71
MCF2L-203ENST00000375604 VWA3AA6NCI4 1184 aa19.49■□□□□ 0.71
MCF2L-203ENST00000375604 C19orf44Q9H6X5 657 aa19.49■□□□□ 0.71
MCF2L-203ENST00000375604 ITSN2Q9NZM3 1697 aa19.49■□□□□ 0.71
MCF2L-203ENST00000375604 DCAF5Q96JK2 942 aa19.49■□□□□ 0.71
MCF2L-203ENST00000375604 BACH1O14867 736 aa19.48■□□□□ 0.71
MCF2L-203ENST00000375604 MRPS9P82933 396 aaKnown RBP19.48■□□□□ 0.71
MCF2L-203ENST00000375604 GSTA5Q7RTV2 222 aa19.48■□□□□ 0.71
MCF2L-203ENST00000375604 ARHGAP45Q92619 1136 aa19.48■□□□□ 0.71
MCF2L-203ENST00000375604 SPTLC2O15270 562 aa19.48■□□□□ 0.71
MCF2L-203ENST00000375604 CCDC186Q7Z3E2 898 aa19.48■□□□□ 0.71
MCF2L-203ENST00000375604 KCNG4Q8TDN1 519 aa19.48■□□□□ 0.71
MCF2L-203ENST00000375604 hCG_1642624A0A1W2PR95 340 aa19.48■□□□□ 0.71
MCF2L-203ENST00000375604 PRIM1P49642 420 aaKnown RBP19.48■□□□□ 0.71
MCF2L-203ENST00000375604 TMTC2Q8N394 836 aa19.48■□□□□ 0.71
MCF2L-203ENST00000375604 TEX11Q8IYF3 940 aa19.48■□□□□ 0.71
MCF2L-203ENST00000375604 NCOA5Q9HCD5 579 aaKnown RBP19.48■□□□□ 0.71
MCF2L-203ENST00000375604 A0A1B0GUL7 405 aa19.48■□□□□ 0.71
MCF2L-203ENST00000375604 PARP1P09874 1014 aaKnown RBP19.48■□□□□ 0.71
MCF2L-203ENST00000375604 PPARDQ03181 441 aa19.48■□□□□ 0.71
MCF2L-203ENST00000375604 MAPK8IP1Q9UQF2 711 aa19.48■□□□□ 0.71
MCF2L-203ENST00000375604 CCDC171Q6TFL3 1326 aa19.47■□□□□ 0.71
MCF2L-203ENST00000375604 PLEKHM2Q8IWE5 1019 aa19.47■□□□□ 0.71
MCF2L-203ENST00000375604 LINS1Q8NG48 757 aa19.47■□□□□ 0.71
MCF2L-203ENST00000375604 LRRC27Q9C0I9 530 aa19.47■□□□□ 0.71
MCF2L-203ENST00000375604 DNAI1Q9UI46 699 aa19.47■□□□□ 0.71
MCF2L-203ENST00000375604 KIF2AO00139 706 aaPredicted RBP19.47■□□□□ 0.71
MCF2L-203ENST00000375604 USH1GQ495M9 461 aa19.47■□□□□ 0.71
MCF2L-203ENST00000375604 CTNND2Q9UQB3 1225 aa19.47■□□□□ 0.71
MCF2L-203ENST00000375604 SYT1P21579 422 aa19.47■□□□□ 0.71
MCF2L-203ENST00000375604 C8orf34Q49A92 452 aa19.47■□□□□ 0.71
MCF2L-203ENST00000375604 TAOK3Q9H2K8 898 aa19.47■□□□□ 0.71
MCF2L-203ENST00000375604 RTL9Q8NET4 1388 aa19.47■□□□□ 0.71
MCF2L-203ENST00000375604 KIAA0753Q2KHM9 967 aa19.47■□□□□ 0.71
MCF2L-203ENST00000375604 CGNQ9P2M7 1197 aaKnown RBP19.47■□□□□ 0.71
MCF2L-203ENST00000375604 A0A1B0GVL5 298 aa19.46■□□□□ 0.71
MCF2L-203ENST00000375604 CCNT1O60563 726 aaKnown RBP19.46■□□□□ 0.71
MCF2L-203ENST00000375604 NF2P35240 595 aa19.46■□□□□ 0.71
MCF2L-203ENST00000375604 SMC1AQ14683 1233 aaKnown RBP19.46■□□□□ 0.71
MCF2L-203ENST00000375604 ZMYM3Q14202 1370 aa19.46■□□□□ 0.71
MCF2L-203ENST00000375604 TRIM75PA6NK02 468 aa19.46■□□□□ 0.71
MCF2L-203ENST00000375604 RAPGEF1Q13905 1077 aa19.46■□□□□ 0.71
MCF2L-203ENST00000375604 SKILP12757 684 aa19.46■□□□□ 0.71
MCF2L-203ENST00000375604 NAA15Q9BXJ9 866 aaKnown RBP19.46■□□□□ 0.71
MCF2L-203ENST00000375604 CCT6AP40227 531 aaKnown RBP19.46■□□□□ 0.71
MCF2L-203ENST00000375604 FAM227BQ96M60 508 aa19.46■□□□□ 0.71
MCF2L-203ENST00000375604 LZTFL1Q9NQ48 299 aa19.46■□□□□ 0.71
MCF2L-203ENST00000375604 UGGT2Q9NYU1 1516 aa19.45■□□□□ 0.7
MCF2L-203ENST00000375604 A0A1W2PRG0 241 aa19.45■□□□□ 0.7
MCF2L-203ENST00000375604 XAGE2Q96GT9 111 aa19.45■□□□□ 0.7
MCF2L-203ENST00000375604 IP6K1Q92551 441 aa19.45■□□□□ 0.7
MCF2L-203ENST00000375604 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.45■□□□□ 0.77e-7■□□□□ 11.2
MCF2L-203ENST00000375604 OTUD7BQ6GQQ9 843 aa19.45■□□□□ 0.7
MCF2L-203ENST00000375604 KRT79Q5XKE5 535 aa19.45■□□□□ 0.7
MCF2L-203ENST00000375604 GINS2Q9Y248 185 aa19.45■□□□□ 0.7
MCF2L-203ENST00000375604 MYCLP12524 364 aaPredicted RBP19.45■□□□□ 0.7
MCF2L-203ENST00000375604 PIK3AP1Q6ZUJ8 805 aa19.45■□□□□ 0.7
MCF2L-203ENST00000375604 ZNF518AQ6AHZ1 1483 aa19.44■□□□□ 0.7
MCF2L-203ENST00000375604 NBPF14Q5TI25 921 aa19.44■□□□□ 0.7
MCF2L-203ENST00000375604 ZNF790Q6PG37 636 aa19.44■□□□□ 0.7
MCF2L-203ENST00000375604 PPP1R14CQ8TAE6 165 aa19.44■□□□□ 0.7
MCF2L-203ENST00000375604 CHMLP26374 656 aa19.44■□□□□ 0.7
MCF2L-203ENST00000375604 DBNDD2Q9BQY9 259 aa19.44■□□□□ 0.7
MCF2L-203ENST00000375604 PYM1Q9BRP8 204 aaKnown RBP19.44■□□□□ 0.7
MCF2L-203ENST00000375604 ANKRD2Q9GZV1 360 aa19.44■□□□□ 0.7
MCF2L-203ENST00000375604 FSD2A1L4K1 749 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms