RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 MYH15Q9Y2K3 1946 aa21.19■□□□□ 0.98
CD40-201ENST00000372276 FGAP02671 866 aa21.19■□□□□ 0.98
CD40-201ENST00000372276 ARID4AP29374 1257 aaPredicted RBP21.19■□□□□ 0.98
CD40-201ENST00000372276 ADD2P35612 726 aa21.19■□□□□ 0.98
CD40-201ENST00000372276 PUM3Q15397 648 aaKnown RBP21.19■□□□□ 0.98
CD40-201ENST00000372276 VGLL2Q8N8G2 317 aa21.19■□□□□ 0.98
CD40-201ENST00000372276 DDX11Q96FC9 970 aa21.19■□□□□ 0.98
CD40-201ENST00000372276 GREM2Q9H772 168 aa21.19■□□□□ 0.98
CD40-201ENST00000372276 DACT1Q9NYF0 836 aa21.19■□□□□ 0.98
CD40-201ENST00000372276 TFIP11Q9UBB9 837 aaKnown RBP21.19■□□□□ 0.98
CD40-201ENST00000372276 ZMYM6O95789 1325 aa21.19■□□□□ 0.98
CD40-201ENST00000372276 LIG1P18858 919 aa21.18■□□□□ 0.98
CD40-201ENST00000372276 TYRO3Q06418 890 aa21.18■□□□□ 0.98
CD40-201ENST00000372276 SASS6Q6UVJ0 657 aa21.18■□□□□ 0.98
CD40-201ENST00000372276 GPAA1O43292 621 aa21.18■□□□□ 0.98
CD40-201ENST00000372276 CTDNEP1O95476 244 aa21.18■□□□□ 0.98
CD40-201ENST00000372276 ALX1Q15699 326 aa21.18■□□□□ 0.98
CD40-201ENST00000372276 MB21D2Q8IYB1 491 aaPredicted RBP21.18■□□□□ 0.98
CD40-201ENST00000372276 LRRC2Q9BYS8 371 aa21.18■□□□□ 0.98
CD40-201ENST00000372276 ZBTB1Q9Y2K1 713 aa21.18■□□□□ 0.98
CD40-201ENST00000372276 AKAP11Q9UKA4 1901 aa21.17■□□□□ 0.98
CD40-201ENST00000372276 PRC1O43663 620 aa21.17■□□□□ 0.98
CD40-201ENST00000372276 GPTP24298 496 aa21.17■□□□□ 0.98
CD40-201ENST00000372276 C8orf37Q96NL8 207 aa21.17■□□□□ 0.98
CD40-201ENST00000372276 ANO8Q9HCE9 1232 aaPredicted RBP21.17■□□□□ 0.98
CD40-201ENST00000372276 SLC5A1P13866 664 aa21.16■□□□□ 0.98
CD40-201ENST00000372276 FAM173BQ6P4H8 233 aa21.16■□□□□ 0.98
CD40-201ENST00000372276 LRP5O75197 1615 aa21.16■□□□□ 0.98
CD40-201ENST00000372276 RTL9Q8NET4 1388 aa21.16■□□□□ 0.98
CD40-201ENST00000372276 CDKL5O76039 1030 aa21.15■□□□□ 0.98
CD40-201ENST00000372276 MCAMP43121 646 aa21.15■□□□□ 0.98
CD40-201ENST00000372276 EIF5P55010 431 aaKnown RBP21.15■□□□□ 0.98
CD40-201ENST00000372276 CPLX2Q6PUV4 134 aaKnown RBP21.15■□□□□ 0.98
CD40-201ENST00000372276 CCDC73Q6ZRK6 1079 aa21.15■□□□□ 0.98
CD40-201ENST00000372276 BRAPQ7Z569 592 aa21.15■□□□□ 0.98
CD40-201ENST00000372276 SLC4A9Q96Q91 983 aa21.15■□□□□ 0.98
CD40-201ENST00000372276 RGS17Q9UGC6 210 aaPredicted RBP21.15■□□□□ 0.98
CD40-201ENST00000372276 CICQ96RK0 1608 aaPredicted RBP21.15■□□□□ 0.98
CD40-201ENST00000372276 ARAP2Q8WZ64 1704 aa21.15■□□□□ 0.98
CD40-201ENST00000372276 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.15■□□□□ 0.98
CD40-201ENST00000372276 CARMIL3Q8ND23 1372 aa21.15■□□□□ 0.98
CD40-201ENST00000372276 ADD1P35611 737 aaKnown RBP21.15■□□□□ 0.98
CD40-201ENST00000372276 CCT2P78371 535 aaKnown RBP21.15■□□□□ 0.98
CD40-201ENST00000372276 SCARF1Q14162 830 aa21.15■□□□□ 0.98
CD40-201ENST00000372276 SLC9C2Q5TAH2 1124 aa21.15■□□□□ 0.98
CD40-201ENST00000372276 NGLY1Q96IV0 654 aa21.15■□□□□ 0.98
CD40-201ENST00000372276 PGBD1Q96JS3 809 aa21.15■□□□□ 0.98
CD40-201ENST00000372276 PUS7LQ9H0K6 701 aaKnown RBP21.15■□□□□ 0.98
CD40-201ENST00000372276 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.15■□□□□ 0.98
CD40-201ENST00000372276 CPLX1O14810 134 aa21.14■□□□□ 0.97
CD40-201ENST00000372276 FGFR2P21802 821 aa21.14■□□□□ 0.97
CD40-201ENST00000372276 CCDC102BQ68D86 513 aa21.14■□□□□ 0.97
CD40-201ENST00000372276 TTLL5Q6EMB2 1281 aa21.14■□□□□ 0.97
CD40-201ENST00000372276 FNBP4Q8N3X1 1017 aaPredicted RBP21.14■□□□□ 0.97
CD40-201ENST00000372276 TMEM87BQ96K49 555 aa21.14■□□□□ 0.97
CD40-201ENST00000372276 CCDC85AQ96PX6 553 aaPredicted RBP21.14■□□□□ 0.97
CD40-201ENST00000372276 UTP14AQ9BVJ6 771 aaKnown RBP21.14■□□□□ 0.97
CD40-201ENST00000372276 CCDC87Q9NVE4 849 aa21.14■□□□□ 0.97
CD40-201ENST00000372276 NAP1L2Q9ULW6 460 aaPredicted RBP21.14■□□□□ 0.97
CD40-201ENST00000372276 MRVI1Q9Y6F6 885 aa21.14■□□□□ 0.97
CD40-201ENST00000372276 NWD2Q9ULI1 1742 aa21.13■□□□□ 0.97
CD40-201ENST00000372276 RGL2O15211 777 aa21.13■□□□□ 0.97
CD40-201ENST00000372276 SLFNL1Q499Z3 407 aa21.13■□□□□ 0.97
CD40-201ENST00000372276 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.13■□□□□ 0.97
CD40-201ENST00000372276 RTEL1Q9NZ71 1219 aa21.13■□□□□ 0.97
CD40-201ENST00000372276 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.13■□□□□ 0.97
CD40-201ENST00000372276 AFF2P51816 1311 aa21.13■□□□□ 0.97
CD40-201ENST00000372276 FOXP2O15409 715 aa21.12■□□□□ 0.97
CD40-201ENST00000372276 GNAT2P19087 354 aa21.12■□□□□ 0.97
CD40-201ENST00000372276 MAP3K12Q12852 859 aa21.12■□□□□ 0.97
CD40-201ENST00000372276 TPRNQ4KMQ1 711 aa21.12■□□□□ 0.97
CD40-201ENST00000372276 ZNF772Q68DY9 489 aaPredicted RBP21.12■□□□□ 0.97
CD40-201ENST00000372276 SMARCC1Q92922 1105 aaPredicted RBP21.12■□□□□ 0.97
CD40-201ENST00000372276 SYTL4Q96C24 671 aaPredicted RBP21.12■□□□□ 0.97
CD40-201ENST00000372276 C8orf76Q96K31 380 aa21.12■□□□□ 0.97
CD40-201ENST00000372276 KLF18A0A0U1RQI7 1052 aa21.11■□□□□ 0.97
CD40-201ENST00000372276 A0A1W2PQ27 194 aa21.11■□□□□ 0.97
CD40-201ENST00000372276 A0A1W2PQ64 194 aa21.11■□□□□ 0.97
CD40-201ENST00000372276 A0A1W2PQD8 194 aa21.11■□□□□ 0.97
CD40-201ENST00000372276 CCDC152Q4G0S7 254 aa21.11■□□□□ 0.97
CD40-201ENST00000372276 KCNG4Q8TDN1 519 aa21.11■□□□□ 0.97
CD40-201ENST00000372276 PIBF1Q8WXW3 757 aa21.11■□□□□ 0.97
CD40-201ENST00000372276 MPHOSPH8Q99549 860 aa21.11■□□□□ 0.97
CD40-201ENST00000372276 MTA3Q9BTC8 594 aa21.11■□□□□ 0.97
CD40-201ENST00000372276 DDX60Q8IY21 1712 aaKnown RBP21.11■□□□□ 0.97
CD40-201ENST00000372276 RREB1Q92766 1687 aa21.11■□□□□ 0.97
CD40-201ENST00000372276 GOLGA8BA8MQT2 603 aa21.11■□□□□ 0.97
CD40-201ENST00000372276 NR1I2O75469 434 aa21.11■□□□□ 0.97
CD40-201ENST00000372276 YEATS4O95619 227 aa21.11■□□□□ 0.97
CD40-201ENST00000372276 DDB1Q16531 1140 aa21.11■□□□□ 0.97
CD40-201ENST00000372276 TDRD7Q8NHU6 1098 aaKnown RBP21.11■□□□□ 0.97
CD40-201ENST00000372276 CNNM2Q9H8M5 875 aa21.11■□□□□ 0.97
CD40-201ENST00000372276 ANGEL1Q9UNK9 670 aaKnown RBP21.11■□□□□ 0.97
CD40-201ENST00000372276 KAT6BQ8WYB5 2073 aa21.1■□□□□ 0.97
CD40-201ENST00000372276 KINO60870 393 aaKnown RBP21.1■□□□□ 0.97
CD40-201ENST00000372276 PDE6AP16499 860 aa21.1■□□□□ 0.97
CD40-201ENST00000372276 FAM160A1Q05DH4 1040 aa21.1■□□□□ 0.97
CD40-201ENST00000372276 CAMK4Q16566 473 aa21.1■□□□□ 0.97
CD40-201ENST00000372276 CCAR1Q8IX12 1150 aaKnown RBP21.1■□□□□ 0.97
CD40-201ENST00000372276 FBXO18Q8NFZ0 1043 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms