RNA–Protein interactions for RNA: ENST00000369258.8

CHD1L-202, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1L, Length 2,967 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-202ENST00000369258 ERBB3P21860 1342 aa15.02□□□□□ -0.01
CHD1L-202ENST00000369258 E4F1Q66K89 784 aaPredicted RBP15.02□□□□□ -0.01
CHD1L-202ENST00000369258 CMTR1Q8N1G2 835 aaKnown RBP15.02□□□□□ -0.01
CHD1L-202ENST00000369258 ZNF397Q8NF99 534 aaPredicted RBP15.02□□□□□ -0.01
CHD1L-202ENST00000369258 SMARCC2Q8TAQ2 1214 aa15.02□□□□□ -0.01
CHD1L-202ENST00000369258 KLF18A0A0U1RQI7 1052 aa15.01□□□□□ -0.01
CHD1L-202ENST00000369258 A0A1B0GUL7 405 aa15.01□□□□□ -0.01
CHD1L-202ENST00000369258 TRHP20396 242 aaPredicted RBP15.01□□□□□ -0.01
CHD1L-202ENST00000369258 FAM160A1Q05DH4 1040 aa15.01□□□□□ -0.01
CHD1L-202ENST00000369258 LRP10Q7Z4F1 713 aa15.01□□□□□ -0.01
CHD1L-202ENST00000369258 CEP57L1Q8IYX8 460 aa15.01□□□□□ -0.01
CHD1L-202ENST00000369258 PUS7LQ9H0K6 701 aaKnown RBP15.01□□□□□ -0.01
CHD1L-202ENST00000369258 MORC2Q9Y6X9 1032 aaPredicted RBP15.01□□□□□ -0.01
CHD1L-202ENST00000369258 UTYO14607 1347 aa15.01□□□□□ -0.01
CHD1L-202ENST00000369258 CARMIL3Q8ND23 1372 aa15.01□□□□□ -0.01
CHD1L-202ENST00000369258 FOXN1O15353 648 aa15.01□□□□□ -0.01
CHD1L-202ENST00000369258 NYAP1Q6ZVC0 841 aa15.01□□□□□ -0.01
CHD1L-202ENST00000369258 CCAR2Q8N163 923 aaKnown RBP15.01□□□□□ -0.01
CHD1L-202ENST00000369258 KCNH5Q8NCM2 988 aa15.01□□□□□ -0.01
CHD1L-202ENST00000369258 ZNF396Q96N95 335 aaPredicted RBP15.01□□□□□ -0.01
CHD1L-202ENST00000369258 KDM3BQ7LBC6 1761 aa15□□□□□ -0.01
CHD1L-202ENST00000369258 GOLGA8BA8MQT2 603 aa15□□□□□ -0.01
CHD1L-202ENST00000369258 FANCGO15287 622 aa15□□□□□ -0.01
CHD1L-202ENST00000369258 FOXP2O15409 715 aa15□□□□□ -0.01
CHD1L-202ENST00000369258 ATP2B1P20020 1258 aa15□□□□□ -0.01
CHD1L-202ENST00000369258 NAA16Q6N069 864 aaPredicted RBP15□□□□□ -0.01
CHD1L-202ENST00000369258 KRT28Q7Z3Y7 464 aa15□□□□□ -0.01
CHD1L-202ENST00000369258 LLPHQ9BRT6 129 aaKnown RBP15□□□□□ -0.01
CHD1L-202ENST00000369258 ZNF446Q9NWS9 450 aa15□□□□□ -0.01
CHD1L-202ENST00000369258 JCADQ9P266 1359 aa15□□□□□ -0.01
CHD1L-202ENST00000369258 TMEM232C9JQI7 657 aa15□□□□□ -0.01
CHD1L-202ENST00000369258 WDHD1O75717 1129 aaPredicted RBP15□□□□□ -0.01
CHD1L-202ENST00000369258 PHKG2P15735 406 aa15□□□□□ -0.01
CHD1L-202ENST00000369258 FMR1NBQ8N0W7 255 aaPredicted RBP15□□□□□ -0.01
CHD1L-202ENST00000369258 KRT222Q8N1A0 295 aa15□□□□□ -0.01
CHD1L-202ENST00000369258 MROH7-TTC4A0A0A0MT08 1334 aa15□□□□□ -0.01
CHD1L-202ENST00000369258 HEG1Q9ULI3 1381 aa15□□□□□ -0.01
CHD1L-202ENST00000369258 KDM6AO15550 1401 aaPredicted RBP15□□□□□ -0.01
CHD1L-202ENST00000369258 NAT10Q9H0A0 1025 aaKnown RBP15□□□□□ -0.01
CHD1L-202ENST00000369258 FOXO4P98177 505 aa14.99□□□□□ -0.01
CHD1L-202ENST00000369258 EXOSC10Q01780 885 aaKnown RBP14.99□□□□□ -0.01
CHD1L-202ENST00000369258 PNOCQ13519 176 aa14.99□□□□□ -0.01
CHD1L-202ENST00000369258 ZRSR1Q15695 479 aaKnown RBP14.99□□□□□ -0.01
CHD1L-202ENST00000369258 ZNF827Q17R98 1081 aa14.99□□□□□ -0.01
CHD1L-202ENST00000369258 FAM89AQ96GI7 184 aa14.99□□□□□ -0.01
CHD1L-202ENST00000369258 ERO1AQ96HE7 468 aa14.99□□□□□ -0.01
CHD1L-202ENST00000369258 ORC3Q9UBD5 711 aaPredicted RBP14.99□□□□□ -0.01
CHD1L-202ENST00000369258 MED1Q15648 1581 aaPredicted RBP14.99□□□□□ -0.01
CHD1L-202ENST00000369258 COBLO75128 1261 aa14.99□□□□□ -0.01
CHD1L-202ENST00000369258 FGAP02671 866 aa14.99□□□□□ -0.01
CHD1L-202ENST00000369258 HOMER1Q86YM7 354 aa14.99□□□□□ -0.01
CHD1L-202ENST00000369258 MRPS27Q92552 414 aaKnown RBP14.99□□□□□ -0.01
CHD1L-202ENST00000369258 CHMP4CQ96CF2 233 aa14.99□□□□□ -0.01
CHD1L-202ENST00000369258 GSDMDP57764 484 aa14.98□□□□□ -0.01
CHD1L-202ENST00000369258 C8orf76Q96K31 380 aa14.98□□□□□ -0.01
CHD1L-202ENST00000369258 ANKARQ7Z5J8 1434 aa14.98□□□□□ -0.01
CHD1L-202ENST00000369258 NFAT5O94916 1531 aa14.98□□□□□ -0.01
CHD1L-202ENST00000369258 SLU7O95391 586 aaKnown RBP14.98□□□□□ -0.01
CHD1L-202ENST00000369258 PRC1O43663 620 aa14.97□□□□□ -0.01
CHD1L-202ENST00000369258 SEC31AO94979 1220 aaKnown RBP14.97□□□□□ -0.01
CHD1L-202ENST00000369258 ZNF202O95125 648 aa14.97□□□□□ -0.01
CHD1L-202ENST00000369258 APPP05067 770 aa14.97□□□□□ -0.01
CHD1L-202ENST00000369258 HMGB1P09429 215 aaKnown RBP14.97□□□□□ -0.01
CHD1L-202ENST00000369258 ZAP70P43403 619 aa14.97□□□□□ -0.01
CHD1L-202ENST00000369258 MICU3Q86XE3 530 aa14.97□□□□□ -0.01
CHD1L-202ENST00000369258 LINC00301Q8NCQ3 95 aa14.97□□□□□ -0.01
CHD1L-202ENST00000369258 ZSWIM4Q9H7M6 989 aa14.97□□□□□ -0.01
CHD1L-202ENST00000369258 DNAI1Q9UI46 699 aa14.97□□□□□ -0.01
CHD1L-202ENST00000369258 NEDD4P46934 1319 aa14.97□□□□□ -0.01
CHD1L-202ENST00000369258 KIF2AO00139 706 aaPredicted RBP14.97□□□□□ -0.01
CHD1L-202ENST00000369258 SNRPA1P09661 255 aaKnown RBP14.97□□□□□ -0.01
CHD1L-202ENST00000369258 SLFN14P0C7P3 912 aa14.97□□□□□ -0.01
CHD1L-202ENST00000369258 CABP4P57796 275 aa14.97□□□□□ -0.01
CHD1L-202ENST00000369258 GRAMD1CQ8IYS0 662 aa14.97□□□□□ -0.01
CHD1L-202ENST00000369258 PPP1R13BQ96KQ4 1090 aa14.97□□□□□ -0.01
CHD1L-202ENST00000369258 KIAA1468Q9P260 1216 aa14.97□□□□□ -0.01
CHD1L-202ENST00000369258 CPLX1O14810 134 aa14.97□□□□□ -0.01
CHD1L-202ENST00000369258 GPTP24298 496 aa14.97□□□□□ -0.01
CHD1L-202ENST00000369258 RGPD5Q99666 1765 aa14.96□□□□□ -0.01
CHD1L-202ENST00000369258 PFKFB1P16118 471 aa14.96□□□□□ -0.01
CHD1L-202ENST00000369258 CDC27P30260 824 aa14.96□□□□□ -0.01
CHD1L-202ENST00000369258 CASP7P55210 303 aa14.96□□□□□ -0.01
CHD1L-202ENST00000369258 ANTXR2P58335 489 aa14.96□□□□□ -0.01
CHD1L-202ENST00000369258 GRIN1Q05586 938 aa14.96□□□□□ -0.01
CHD1L-202ENST00000369258 ATL3Q6DD88 541 aa14.96□□□□□ -0.01
CHD1L-202ENST00000369258 HELBQ8NG08 1087 aaPredicted RBP14.96□□□□□ -0.01
CHD1L-202ENST00000369258 PODXL2Q9NZ53 605 aa14.96□□□□□ -0.01
CHD1L-202ENST00000369258 HPS5Q9UPZ3 1129 aa14.96□□□□□ -0.01
CHD1L-202ENST00000369258 SPTLC2O15270 562 aa14.96□□□□□ -0.02
CHD1L-202ENST00000369258 TFRCP02786 760 aaKnown RBP14.96□□□□□ -0.02
CHD1L-202ENST00000369258 SLC3A2P08195 630 aaKnown RBP14.96□□□□□ -0.02
CHD1L-202ENST00000369258 ZMYM1Q5SVZ6 1142 aa14.96□□□□□ -0.02
CHD1L-202ENST00000369258 TAF3Q5VWG9 929 aa14.96□□□□□ -0.02
CHD1L-202ENST00000369258 TRMT44Q8IYL2 757 aaKnown RBP14.96□□□□□ -0.02
CHD1L-202ENST00000369258 ZFP91Q96JP5 570 aaPredicted RBP14.96□□□□□ -0.02
CHD1L-202ENST00000369258 ZKSCAN3Q9BRR0 538 aa14.96□□□□□ -0.02
CHD1L-202ENST00000369258 UTP14AQ9BVJ6 771 aaKnown RBP14.96□□□□□ -0.02
CHD1L-202ENST00000369258 A0A0U1RQJ8 604 aa14.95□□□□□ -0.02
CHD1L-202ENST00000369258 POLR3GO15318 223 aaPredicted RBP14.95□□□□□ -0.02
CHD1L-202ENST00000369258 PDILTQ8N807 584 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms