RNA–Protein interactions for RNA: ENST00000368361.8

CLK2-203, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLK2, Length 2,166 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-203ENST00000368361 MBD3O95983 291 aa29.5■■■□□ 2.31
CLK2-203ENST00000368361 UBE3CQ15386 1083 aa29.5■■■□□ 2.31
CLK2-203ENST00000368361 IMMTQ16891 758 aaKnown RBP29.5■■■□□ 2.31
CLK2-203ENST00000368361 WWC3Q9ULE0 1092 aa29.5■■■□□ 2.31
CLK2-203ENST00000368361 ATP6V1DQ9Y5K8 247 aa29.5■■■□□ 2.31
CLK2-203ENST00000368361 ZNF532Q9HCE3 1301 aa29.5■■■□□ 2.31
CLK2-203ENST00000368361 RGL2O15211 777 aa29.5■■■□□ 2.31
CLK2-203ENST00000368361 AGXT2Q9BYV1 514 aa29.5■■■□□ 2.31
CLK2-203ENST00000368361 TAF1P21675 1872 aa29.49■■■□□ 2.31
CLK2-203ENST00000368361 PDE6AP16499 860 aa29.49■■■□□ 2.31
CLK2-203ENST00000368361 SF3B3Q15393 1217 aaKnown RBP29.49■■■□□ 2.31
CLK2-203ENST00000368361 TMEM63CQ9P1W3 806 aa29.49■■■□□ 2.31
CLK2-203ENST00000368361 AFF2P51816 1311 aa29.49■■■□□ 2.31
CLK2-203ENST00000368361 BCAMP50895 628 aa29.49■■■□□ 2.31
CLK2-203ENST00000368361 CHST3Q7LGC8 479 aa29.49■■■□□ 2.31
CLK2-203ENST00000368361 AMIGO3Q86WK7 504 aa29.49■■■□□ 2.31
CLK2-203ENST00000368361 CERKQ8TCT0 537 aa29.49■■■□□ 2.31
CLK2-203ENST00000368361 GADD45BO75293 160 aaPredicted RBP29.48■■■□□ 2.31
CLK2-203ENST00000368361 HSPA1LP34931 641 aa29.48■■■□□ 2.31
CLK2-203ENST00000368361 ZNF445P59923 1031 aa29.48■■■□□ 2.31
CLK2-203ENST00000368361 TMEM87AQ8NBN3 555 aa29.48■■■□□ 2.31
CLK2-203ENST00000368361 TCRBV5S4A2TA0A5A2 114 aa29.47■■■□□ 2.31
CLK2-203ENST00000368361 PDCP20941 246 aa29.47■■■□□ 2.31
CLK2-203ENST00000368361 GTF2E1P29083 439 aaPredicted RBP29.47■■■□□ 2.31
CLK2-203ENST00000368361 APOBRQ0VD83 1088 aa29.47■■■□□ 2.31
CLK2-203ENST00000368361 SCRN1Q12765 414 aa29.47■■■□□ 2.31
CLK2-203ENST00000368361 JAK2O60674 1132 aa29.47■■■□□ 2.31
CLK2-203ENST00000368361 CDC37L1Q7L3B6 337 aa29.47■■■□□ 2.31
CLK2-203ENST00000368361 ANKRD18AQ8IVF6 992 aa29.47■■■□□ 2.31
CLK2-203ENST00000368361 SBF2Q86WG5 1849 aa29.47■■■□□ 2.31
CLK2-203ENST00000368361 LY75O60449 1722 aa29.46■■■□□ 2.31
CLK2-203ENST00000368361 RTCBQ9Y3I0 505 aaKnown RBP29.46■■■□□ 2.31
CLK2-203ENST00000368361 DOCK2Q92608 1830 aa29.46■■■□□ 2.31
CLK2-203ENST00000368361 TAF1LQ8IZX4 1826 aa29.46■■■□□ 2.31
CLK2-203ENST00000368361 ZPR1O75312 459 aa29.46■■■□□ 2.31
CLK2-203ENST00000368361 PDIA4P13667 645 aaKnown RBP29.46■■■□□ 2.31
CLK2-203ENST00000368361 SETDB2Q96T68 719 aa29.45■■■□□ 2.31
CLK2-203ENST00000368361 PFKFB2O60825 505 aa29.45■■■□□ 2.3
CLK2-203ENST00000368361 DNM1Q05193 864 aaKnown RBP29.45■■■□□ 2.3
CLK2-203ENST00000368361 SLC10A5Q5PT55 438 aa29.45■■■□□ 2.3
CLK2-203ENST00000368361 ZNF213O14771 459 aa29.44■■■□□ 2.3
CLK2-203ENST00000368361 A0A1B0GUL6 1792 aa29.44■■■□□ 2.3
CLK2-203ENST00000368361 COL24A1Q17RW2 1714 aa29.43■■■□□ 2.3
CLK2-203ENST00000368361 MAGEB6Q8N7X4 407 aa29.43■■■□□ 2.3
CLK2-203ENST00000368361 ARHGEF1Q92888 912 aaKnown RBP29.43■■■□□ 2.3
CLK2-203ENST00000368361 NYXQ9GZU5 481 aa29.43■■■□□ 2.3
CLK2-203ENST00000368361 BSDC1Q9NW68 430 aaPredicted RBP29.43■■■□□ 2.3
CLK2-203ENST00000368361 FIBPO43427 364 aa29.42■■■□□ 2.3
CLK2-203ENST00000368361 ONECUT3O60422 494 aaPredicted RBP29.42■■■□□ 2.3
CLK2-203ENST00000368361 MAP3K12Q12852 859 aa29.42■■■□□ 2.3
CLK2-203ENST00000368361 EP400Q96L91 3159 aa29.42■■■□□ 2.3
CLK2-203ENST00000368361 FERMT3Q86UX7 667 aa29.42■■■□□ 2.3
CLK2-203ENST00000368361 NBPF5PQ86XG9 351 aaPredicted RBP29.42■■■□□ 2.3
CLK2-203ENST00000368361 CELF1Q92879 486 aaKnown RBP29.42■■■□□ 2.3
CLK2-203ENST00000368361 WTIPA6NIX2 430 aaPredicted RBP29.41■■■□□ 2.3
CLK2-203ENST00000368361 SEPT12Q8IYM1 358 aa29.41■■■□□ 2.3
CLK2-203ENST00000368361 AIDAQ96BJ3 306 aa29.41■■■□□ 2.3
CLK2-203ENST00000368361 MB21D2Q8IYB1 491 aaPredicted RBP29.4■■■□□ 2.3
CLK2-203ENST00000368361 FBXL16Q8N461 479 aa29.4■■■□□ 2.3
CLK2-203ENST00000368361 APPP05067 770 aa29.4■■■□□ 2.3
CLK2-203ENST00000368361 DDX11Q96FC9 970 aa29.4■■■□□ 2.3
CLK2-203ENST00000368361 STRBPQ96SI9 672 aaKnown RBP29.4■■■□□ 2.3
CLK2-203ENST00000368361 TRPC5Q9UL62 973 aaPredicted RBP29.4■■■□□ 2.3
CLK2-203ENST00000368361 CCT2P78371 535 aaKnown RBP29.39■■■□□ 2.3
CLK2-203ENST00000368361 NCOA7Q8NI08 942 aa29.39■■■□□ 2.3
CLK2-203ENST00000368361 SMARCC2Q8TAQ2 1214 aa29.39■■■□□ 2.3
CLK2-203ENST00000368361 LLPHQ9BRT6 129 aaKnown RBP29.39■■■□□ 2.3
CLK2-203ENST00000368361 NBPF3Q9H094 633 aa29.39■■■□□ 2.3
CLK2-203ENST00000368361 GPHNQ9NQX3 736 aaPredicted RBP29.39■■■□□ 2.3
CLK2-203ENST00000368361 MINPP1Q9UNW1 487 aa29.39■■■□□ 2.3
CLK2-203ENST00000368361 C4BP0C0L5 1744 aa29.39■■■□□ 2.3
CLK2-203ENST00000368361 PDIA3P30101 505 aaKnown RBP29.39■■■□□ 2.29
CLK2-203ENST00000368361 CCDC24Q8N4L8 307 aa29.39■■■□□ 2.29
CLK2-203ENST00000368361 NAP1L2Q9ULW6 460 aaPredicted RBP29.39■■■□□ 2.29
CLK2-203ENST00000368361 IQSEC3Q9UPP2 1182 aaPredicted RBP29.39■■■□□ 2.29
CLK2-203ENST00000368361 SYCE3A1L190 88 aa29.38■■■□□ 2.29
CLK2-203ENST00000368361 NSUN7Q8NE18 718 aaKnown RBP29.38■■■□□ 2.29
CLK2-203ENST00000368361 ZNF274Q96GC6 653 aaPredicted RBP29.38■■■□□ 2.29
CLK2-203ENST00000368361 NLRP3Q96P20 1036 aa29.38■■■□□ 2.29
CLK2-203ENST00000368361 C4AP0C0L4 1744 aa29.38■■■□□ 2.29
CLK2-203ENST00000368361 CTDNEP1O95476 244 aa29.37■■■□□ 2.29
CLK2-203ENST00000368361 MCM5P33992 734 aa29.37■■■□□ 2.29
CLK2-203ENST00000368361 NCOA5Q9HCD5 579 aaKnown RBP29.37■■■□□ 2.29
CLK2-203ENST00000368361 PRC1O43663 620 aa29.37■■■□□ 2.29
CLK2-203ENST00000368361 PHF14O94880 888 aa29.37■■■□□ 2.29
CLK2-203ENST00000368361 GYG1P46976 350 aa29.37■■■□□ 2.29
CLK2-203ENST00000368361 RALYLQ86SE5 291 aaKnown RBP29.37■■■□□ 2.29
CLK2-203ENST00000368361 ZNF804BA4D1E1 1349 aa29.37■■■□□ 2.29
CLK2-203ENST00000368361 UBE4AQ14139 1066 aa29.36■■■□□ 2.29
CLK2-203ENST00000368361 FAM173BQ6P4H8 233 aa29.36■■■□□ 2.29
CLK2-203ENST00000368361 TPTE2Q6XPS3 522 aa29.36■■■□□ 2.29
CLK2-203ENST00000368361 MBD4O95243 580 aa29.36■■■□□ 2.29
CLK2-203ENST00000368361 ANTXR2P58335 489 aa29.36■■■□□ 2.29
CLK2-203ENST00000368361 UBE2HP62256 183 aa29.36■■■□□ 2.29
CLK2-203ENST00000368361 TBC1D10CQ8IV04 446 aa29.36■■■□□ 2.29
CLK2-203ENST00000368361 EVCP57679 992 aa29.35■■■□□ 2.29
CLK2-203ENST00000368361 TPRNQ4KMQ1 711 aa29.35■■■□□ 2.29
CLK2-203ENST00000368361 FAM184AQ8NB25 1140 aa29.35■■■□□ 2.29
CLK2-203ENST00000368361 DENND2AQ9ULE3 1009 aa29.35■■■□□ 2.29
CLK2-203ENST00000368361 PTPDC1A2A3K4 754 aa29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms