RNA–Protein interactions for RNA: ENST00000360046.9

HOXA4-201, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-201ENST00000360046 ZC3H12CQ9C0D7 883 aaKnown RBP26.46■■□□□ 1.83
HOXA4-201ENST00000360046 MYO5AQ9Y4I1 1855 aaKnown RBP26.46■■□□□ 1.83
HOXA4-201ENST00000360046 MYH7P12883 1935 aa26.46■■□□□ 1.83
HOXA4-201ENST00000360046 GRIPAP1Q4V328 841 aa26.45■■□□□ 1.83
HOXA4-201ENST00000360046 UPF2Q9HAU5 1272 aaKnown RBP26.45■■□□□ 1.83
HOXA4-201ENST00000360046 WASHC4Q2M389 1173 aa26.45■■□□□ 1.82
HOXA4-201ENST00000360046 PIH1D3Q9NQM4 214 aaKnown RBP26.45■■□□□ 1.82
HOXA4-201ENST00000360046 EIF5BO60841 1220 aaKnown RBP26.44■■□□□ 1.82
HOXA4-201ENST00000360046 RUFY2Q8WXA3 655 aa26.44■■□□□ 1.82
HOXA4-201ENST00000360046 NMIQ13287 307 aaPredicted RBP26.43■■□□□ 1.82
HOXA4-201ENST00000360046 LRRFIP1Q32MZ4 808 aaKnown RBP26.43■■□□□ 1.82
HOXA4-201ENST00000360046 SUPT20HQ8NEM7 779 aa26.43■■□□□ 1.82
HOXA4-201ENST00000360046 DOCK2Q92608 1830 aa26.43■■□□□ 1.82
HOXA4-201ENST00000360046 SNED1Q8TER0 1413 aa26.43■■□□□ 1.82
HOXA4-201ENST00000360046 G3V3G9 751 aa26.42■■□□□ 1.82
HOXA4-201ENST00000360046 IDH1O75874 414 aaKnown RBP26.42■■□□□ 1.82
HOXA4-201ENST00000360046 CHAF1AQ13111 956 aaPredicted RBP26.42■■□□□ 1.82
HOXA4-201ENST00000360046 DCAF8Q5TAQ9 597 aa26.42■■□□□ 1.82
HOXA4-201ENST00000360046 FAM227BQ96M60 508 aa26.42■■□□□ 1.82
HOXA4-201ENST00000360046 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.42■■□□□ 1.82
HOXA4-201ENST00000360046 CD209Q9NNX6 404 aa26.42■■□□□ 1.82
HOXA4-201ENST00000360046 TDRD7Q8NHU6 1098 aaKnown RBP26.42■■□□□ 1.82
HOXA4-201ENST00000360046 RTFDC1Q9BY42 306 aaPredicted RBP26.42■■□□□ 1.82
HOXA4-201ENST00000360046 TICAM2Q86XR7 235 aa26.41■■□□□ 1.82
HOXA4-201ENST00000360046 PDS5AQ29RF7 1337 aaKnown RBP26.41■■□□□ 1.82
HOXA4-201ENST00000360046 A0A0D9SFI3 127 aa26.4■■□□□ 1.82
HOXA4-201ENST00000360046 RNF113AO15541 343 aaKnown RBP26.4■■□□□ 1.82
HOXA4-201ENST00000360046 REC8O95072 547 aa26.4■■□□□ 1.82
HOXA4-201ENST00000360046 CHGBP05060 677 aa26.4■■□□□ 1.82
HOXA4-201ENST00000360046 IL25Q9H293 177 aa26.4■■□□□ 1.82
HOXA4-201ENST00000360046 ABCF2Q9UG63 623 aa26.4■■□□□ 1.82
HOXA4-201ENST00000360046 JAG2Q9Y219 1238 aa26.4■■□□□ 1.82
HOXA4-201ENST00000360046 SGSM2O43147 1006 aa26.39■■□□□ 1.82
HOXA4-201ENST00000360046 IL1R1P14778 569 aa26.39■■□□□ 1.82
HOXA4-201ENST00000360046 DOK7Q18PE1 504 aa26.39■■□□□ 1.82
HOXA4-201ENST00000360046 COA1Q9GZY4 146 aa26.39■■□□□ 1.82
HOXA4-201ENST00000360046 LRP2BPQ9P2M1 347 aa26.39■■□□□ 1.82
HOXA4-201ENST00000360046 ZFYP08048 801 aaPredicted RBP26.39■■□□□ 1.81
HOXA4-201ENST00000360046 MAP3K12Q12852 859 aa26.39■■□□□ 1.81
HOXA4-201ENST00000360046 ZSCAN25Q6NSZ9 544 aa26.39■■□□□ 1.81
HOXA4-201ENST00000360046 PSMD1Q99460 953 aa26.39■■□□□ 1.81
HOXA4-201ENST00000360046 AOC3Q16853 763 aa26.38■■□□□ 1.81
HOXA4-201ENST00000360046 SLFNL1Q499Z3 407 aa26.38■■□□□ 1.81
HOXA4-201ENST00000360046 SLC9C2Q5TAH2 1124 aa26.38■■□□□ 1.81
HOXA4-201ENST00000360046 RAD50Q92878 1312 aa26.37■■□□□ 1.81
HOXA4-201ENST00000360046 ZBTB22O15209 634 aa26.37■■□□□ 1.81
HOXA4-201ENST00000360046 PPIP5K2O43314 1243 aa26.37■■□□□ 1.81
HOXA4-201ENST00000360046 ANO2Q9NQ90 1003 aa26.37■■□□□ 1.81
HOXA4-201ENST00000360046 ZNF277Q9NRM2 450 aaPredicted RBP26.36■■□□□ 1.81
HOXA4-201ENST00000360046 WDR66Q8TBY9 1149 aa26.36■■□□□ 1.81
HOXA4-201ENST00000360046 TAOK3Q9H2K8 898 aa26.36■■□□□ 1.81
HOXA4-201ENST00000360046 RAI14Q9P0K7 980 aa26.36■■□□□ 1.81
HOXA4-201ENST00000360046 CHD4Q14839 1912 aa26.35■■□□□ 1.81
HOXA4-201ENST00000360046 PDE6AP16499 860 aa26.35■■□□□ 1.81
HOXA4-201ENST00000360046 ZMYM1Q5SVZ6 1142 aa26.35■■□□□ 1.81
HOXA4-201ENST00000360046 DBNDD1Q9H9R9 158 aa26.35■■□□□ 1.81
HOXA4-201ENST00000360046 ADD2P35612 726 aa26.34■■□□□ 1.81
HOXA4-201ENST00000360046 KIAA2012Q0VF49 1180 aa26.34■■□□□ 1.81
HOXA4-201ENST00000360046 MCMDC2Q4G0Z9 681 aa26.34■■□□□ 1.81
HOXA4-201ENST00000360046 KIAA1211Q6ZU35 1233 aa26.34■■□□□ 1.81
HOXA4-201ENST00000360046 MAGEB6Q8N7X4 407 aa26.34■■□□□ 1.81
HOXA4-201ENST00000360046 SEC62Q99442 399 aaKnown RBP26.34■■□□□ 1.81
HOXA4-201ENST00000360046 HELLSQ9NRZ9 838 aa26.34■■□□□ 1.81
HOXA4-201ENST00000360046 C22orf23Q9BZE7 217 aa26.34■■□□□ 1.81
HOXA4-201ENST00000360046 ARFGEF1Q9Y6D6 1849 aa26.33■■□□□ 1.81
HOXA4-201ENST00000360046 ZNF532Q9HCE3 1301 aa26.33■■□□□ 1.81
HOXA4-201ENST00000360046 ERICH6Q7L0X2 663 aa26.33■■□□□ 1.81
HOXA4-201ENST00000360046 LARGE2Q8N3Y3 721 aa26.33■■□□□ 1.81
HOXA4-201ENST00000360046 ZGPATQ8N5A5 531 aaKnown RBP26.33■■□□□ 1.81
HOXA4-201ENST00000360046 APPBP2Q92624 585 aa26.33■■□□□ 1.81
HOXA4-201ENST00000360046 FBXW7Q969H0 707 aa26.33■■□□□ 1.81
HOXA4-201ENST00000360046 RBM19Q9Y4C8 960 aaKnown RBP26.33■■□□□ 1.81
HOXA4-201ENST00000360046 FER1L6Q2WGJ9 1857 aa26.33■■□□□ 1.81
HOXA4-201ENST00000360046 CCDC88AQ3V6T2 1871 aa26.32■■□□□ 1.8
HOXA4-201ENST00000360046 NFKBIEO00221 500 aa26.32■■□□□ 1.8
HOXA4-201ENST00000360046 UBE3CQ15386 1083 aa26.32■■□□□ 1.8
HOXA4-201ENST00000360046 CCDC129Q6ZRS4 1044 aa26.32■■□□□ 1.8
HOXA4-201ENST00000360046 ZNF589Q86UQ0 364 aaPredicted RBP26.32■■□□□ 1.8
HOXA4-201ENST00000360046 MAST3O60307 1309 aa26.32■■□□□ 1.8
HOXA4-201ENST00000360046 SALL1Q9NSC2 1324 aa26.32■■□□□ 1.8
HOXA4-201ENST00000360046 SPTY2D1Q68D10 685 aaPredicted RBP26.31■■□□□ 1.8
HOXA4-201ENST00000360046 ARHGAP27Q6ZUM4 889 aa26.31■■□□□ 1.8
HOXA4-201ENST00000360046 USP26Q9BXU7 913 aa26.31■■□□□ 1.8
HOXA4-201ENST00000360046 MAST2Q6P0Q8 1798 aa26.31■■□□□ 1.8
HOXA4-201ENST00000360046 ECE2O60344 883 aa26.31■■□□□ 1.8
HOXA4-201ENST00000360046 IARSP41252 1262 aaKnown RBP26.31■■□□□ 1.8
HOXA4-201ENST00000360046 GTF2IP78347 998 aa26.31■■□□□ 1.8
HOXA4-201ENST00000360046 PODNQ7Z5L7 613 aa26.31■■□□□ 1.8
HOXA4-201ENST00000360046 OSBP2Q969R2 916 aa26.31■■□□□ 1.8
HOXA4-201ENST00000360046 TBC1D32Q96NH3 1257 aa26.31■■□□□ 1.8
HOXA4-201ENST00000360046 M0R2C6 588 aa26.3■■□□□ 1.8
HOXA4-201ENST00000360046 PRDX5P30044 214 aa26.3■■□□□ 1.8
HOXA4-201ENST00000360046 RASSF7Q02833 373 aa26.3■■□□□ 1.8
HOXA4-201ENST00000360046 CCDC171Q6TFL3 1326 aa26.29■■□□□ 1.8
HOXA4-201ENST00000360046 FAM205AQ6ZU69 1335 aa26.29■■□□□ 1.8
HOXA4-201ENST00000360046 TCRBV5S4A2TA0A5A2 114 aa26.29■■□□□ 1.8
HOXA4-201ENST00000360046 TBC1D22AQ8WUA7 517 aa26.29■■□□□ 1.8
HOXA4-201ENST00000360046 VPS33BQ9H267 617 aa26.29■■□□□ 1.8
HOXA4-201ENST00000360046 LDHBP07195 334 aaKnown RBP26.28■■□□□ 1.8
HOXA4-201ENST00000360046 MFSD14BQ5SR56 506 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms