RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 THSD7AQ9UPZ6 1657 aa24.08■■□□□ 1.45
CHRNA3-202ENST00000348639 UBE2HP62256 183 aa24.08■■□□□ 1.44
CHRNA3-202ENST00000348639 DNM1Q05193 864 aaKnown RBP24.08■■□□□ 1.44
CHRNA3-202ENST00000348639 LRSAM1Q6UWE0 723 aa24.08■■□□□ 1.44
CHRNA3-202ENST00000348639 CDC37L1Q7L3B6 337 aa24.08■■□□□ 1.44
CHRNA3-202ENST00000348639 AFF2P51816 1311 aa24.07■■□□□ 1.44
CHRNA3-202ENST00000348639 GNPATO15228 680 aa24.07■■□□□ 1.44
CHRNA3-202ENST00000348639 IDH1O75874 414 aaKnown RBP24.07■■□□□ 1.44
CHRNA3-202ENST00000348639 SCRN1Q12765 414 aa24.07■■□□□ 1.44
CHRNA3-202ENST00000348639 SPATA5Q8NB90 893 aa24.07■■□□□ 1.44
CHRNA3-202ENST00000348639 GTF2E1P29083 439 aaPredicted RBP24.06■■□□□ 1.44
CHRNA3-202ENST00000348639 NASPP49321 788 aaPredicted RBP24.06■■□□□ 1.44
CHRNA3-202ENST00000348639 RC3H1Q5TC82 1133 aaKnown RBP24.06■■□□□ 1.44
CHRNA3-202ENST00000348639 SYCE3A1L190 88 aa24.06■■□□□ 1.44
CHRNA3-202ENST00000348639 JAK2O60674 1132 aa24.06■■□□□ 1.44
CHRNA3-202ENST00000348639 APOBRQ0VD83 1088 aa24.06■■□□□ 1.44
CHRNA3-202ENST00000348639 TBC1D9BQ66K14 1250 aa24.06■■□□□ 1.44
CHRNA3-202ENST00000348639 CDC5LQ99459 802 aaKnown RBP24.06■■□□□ 1.44
CHRNA3-202ENST00000348639 FIBPO43427 364 aa24.05■■□□□ 1.44
CHRNA3-202ENST00000348639 PDE6AP16499 860 aa24.05■■□□□ 1.44
CHRNA3-202ENST00000348639 SMARCC2Q8TAQ2 1214 aa24.05■■□□□ 1.44
CHRNA3-202ENST00000348639 ZNF532Q9HCE3 1301 aa24.05■■□□□ 1.44
CHRNA3-202ENST00000348639 TCRBV5S4A2TA0A5A2 114 aa24.05■■□□□ 1.44
CHRNA3-202ENST00000348639 RPS6KA4O75676 772 aa24.05■■□□□ 1.44
CHRNA3-202ENST00000348639 RASGRF1Q13972 1273 aa24.05■■□□□ 1.44
CHRNA3-202ENST00000348639 ZNF274Q96GC6 653 aaPredicted RBP24.05■■□□□ 1.44
CHRNA3-202ENST00000348639 SRP68Q9UHB9 627 aaKnown RBP24.05■■□□□ 1.44
CHRNA3-202ENST00000348639 ZNF213O14771 459 aa24.04■■□□□ 1.44
CHRNA3-202ENST00000348639 HAND2P61296 217 aa24.04■■□□□ 1.44
CHRNA3-202ENST00000348639 SF3B3Q15393 1217 aaKnown RBP24.04■■□□□ 1.44
CHRNA3-202ENST00000348639 NHSQ6T4R5 1651 aa24.04■■□□□ 1.44
CHRNA3-202ENST00000348639 ZPR1O75312 459 aa24.03■■□□□ 1.44
CHRNA3-202ENST00000348639 CHRNDQ07001 517 aa24.03■■□□□ 1.44
CHRNA3-202ENST00000348639 BCL2L12Q9HB09 334 aa24.03■■□□□ 1.44
CHRNA3-202ENST00000348639 NARFQ9UHQ1 456 aa24.03■■□□□ 1.44
CHRNA3-202ENST00000348639 WWC3Q9ULE0 1092 aa24.03■■□□□ 1.44
CHRNA3-202ENST00000348639 PHF14O94880 888 aa24.03■■□□□ 1.44
CHRNA3-202ENST00000348639 EVCP57679 992 aa24.03■■□□□ 1.44
CHRNA3-202ENST00000348639 C3orf67Q6ZVT6 689 aa24.03■■□□□ 1.44
CHRNA3-202ENST00000348639 CHMP4CQ96CF2 233 aa24.03■■□□□ 1.44
CHRNA3-202ENST00000348639 KRT85P78386 507 aa24.02■■□□□ 1.44
CHRNA3-202ENST00000348639 CHST3Q7LGC8 479 aa24.02■■□□□ 1.44
CHRNA3-202ENST00000348639 FERMT3Q86UX7 667 aa24.02■■□□□ 1.44
CHRNA3-202ENST00000348639 RBSNQ9H1K0 784 aa24.02■■□□□ 1.44
CHRNA3-202ENST00000348639 RTCBQ9Y3I0 505 aaKnown RBP24.02■■□□□ 1.44
CHRNA3-202ENST00000348639 MYO5AQ9Y4I1 1855 aaKnown RBP24.01■■□□□ 1.43
CHRNA3-202ENST00000348639 PDIA3P30101 505 aaKnown RBP24.01■■□□□ 1.43
CHRNA3-202ENST00000348639 MAP3K12Q12852 859 aa24.01■■□□□ 1.43
CHRNA3-202ENST00000348639 MB21D2Q8IYB1 491 aaPredicted RBP24.01■■□□□ 1.43
CHRNA3-202ENST00000348639 NSUN7Q8NE18 718 aaKnown RBP24.01■■□□□ 1.43
CHRNA3-202ENST00000348639 NCOA7Q8NI08 942 aa24.01■■□□□ 1.43
CHRNA3-202ENST00000348639 SCN7AQ01118 1682 aa24.01■■□□□ 1.43
CHRNA3-202ENST00000348639 MCM5P33992 734 aa24.01■■□□□ 1.43
CHRNA3-202ENST00000348639 HMGN5P82970 282 aaKnown RBP24.01■■□□□ 1.43
CHRNA3-202ENST00000348639 SLC10A5Q5PT55 438 aa24.01■■□□□ 1.43
CHRNA3-202ENST00000348639 SEPT12Q8IYM1 358 aa24.01■■□□□ 1.43
CHRNA3-202ENST00000348639 SETDB2Q96T68 719 aa24.01■■□□□ 1.43
CHRNA3-202ENST00000348639 BCAMP50895 628 aa24■■□□□ 1.43
CHRNA3-202ENST00000348639 ANKRD18AQ8IVF6 992 aa24■■□□□ 1.43
CHRNA3-202ENST00000348639 FAM184AQ8NB25 1140 aa24■■□□□ 1.43
CHRNA3-202ENST00000348639 WDR19Q8NEZ3 1342 aa24■■□□□ 1.43
CHRNA3-202ENST00000348639 CTDNEP1O95476 244 aa24■■□□□ 1.43
CHRNA3-202ENST00000348639 DDX11Q96FC9 970 aa24■■□□□ 1.43
CHRNA3-202ENST00000348639 STRBPQ96SI9 672 aaKnown RBP24■■□□□ 1.43
CHRNA3-202ENST00000348639 TRPC5Q9UL62 973 aaPredicted RBP24■■□□□ 1.43
CHRNA3-202ENST00000348639 CCDC183Q5T5S1 534 aa23.99■■□□□ 1.43
CHRNA3-202ENST00000348639 RALYLQ86SE5 291 aaKnown RBP23.99■■□□□ 1.43
CHRNA3-202ENST00000348639 AMIGO3Q86WK7 504 aa23.99■■□□□ 1.43
CHRNA3-202ENST00000348639 FAM43AQ8N2R8 423 aa23.99■■□□□ 1.43
CHRNA3-202ENST00000348639 ANP32BQ92688 251 aaKnown RBP23.99■■□□□ 1.43
CHRNA3-202ENST00000348639 AIDAQ96BJ3 306 aa23.99■■□□□ 1.43
CHRNA3-202ENST00000348639 KIF3AQ9Y496 699 aa23.99■■□□□ 1.43
CHRNA3-202ENST00000348639 DOCK2Q92608 1830 aa23.99■■□□□ 1.43
CHRNA3-202ENST00000348639 ELP1O95163 1332 aa23.99■■□□□ 1.43
CHRNA3-202ENST00000348639 COL4A1P02462 1669 aa23.98■■□□□ 1.43
CHRNA3-202ENST00000348639 PRC1O43663 620 aa23.98■■□□□ 1.43
CHRNA3-202ENST00000348639 NBPF5PQ86XG9 351 aaPredicted RBP23.98■■□□□ 1.43
CHRNA3-202ENST00000348639 BSDC1Q9NW68 430 aaPredicted RBP23.98■■□□□ 1.43
CHRNA3-202ENST00000348639 PTPDC1A2A3K4 754 aa23.98■■□□□ 1.43
CHRNA3-202ENST00000348639 CCT2P78371 535 aaKnown RBP23.98■■□□□ 1.43
CHRNA3-202ENST00000348639 ALX1Q15699 326 aa23.98■■□□□ 1.43
CHRNA3-202ENST00000348639 MAGEB6Q8N7X4 407 aa23.98■■□□□ 1.43
CHRNA3-202ENST00000348639 ARHGEF1Q92888 912 aaKnown RBP23.98■■□□□ 1.43
CHRNA3-202ENST00000348639 NYXQ9GZU5 481 aa23.98■■□□□ 1.43
CHRNA3-202ENST00000348639 SALL1Q9NSC2 1324 aa23.97■■□□□ 1.43
CHRNA3-202ENST00000348639 H3BQV1 296 aa23.97■■□□□ 1.43
CHRNA3-202ENST00000348639 CCDC173Q0VFZ6 552 aa23.97■■□□□ 1.43
CHRNA3-202ENST00000348639 IFFO2Q5TF58 517 aa23.97■■□□□ 1.43
CHRNA3-202ENST00000348639 NBPF3Q9H094 633 aa23.97■■□□□ 1.43
CHRNA3-202ENST00000348639 RTN4Q9NQC3 1192 aaKnown RBP23.97■■□□□ 1.43
CHRNA3-202ENST00000348639 ZMYM6O95789 1325 aa23.97■■□□□ 1.43
CHRNA3-202ENST00000348639 LETM1O95202 739 aaPredicted RBP23.96■■□□□ 1.43
CHRNA3-202ENST00000348639 APPP05067 770 aa23.96■■□□□ 1.43
CHRNA3-202ENST00000348639 FAM173BQ6P4H8 233 aa23.96■■□□□ 1.43
CHRNA3-202ENST00000348639 CCDC24Q8N4L8 307 aa23.96■■□□□ 1.43
CHRNA3-202ENST00000348639 PPP1R9BQ96SB3 815 aa23.96■■□□□ 1.43
CHRNA3-202ENST00000348639 SCAND2PQ9GZW5 306 aaPredicted RBP23.96■■□□□ 1.43
CHRNA3-202ENST00000348639 ZSCAN16Q9H4T2 348 aaPredicted RBP23.96■■□□□ 1.43
CHRNA3-202ENST00000348639 NCOA5Q9HCD5 579 aaKnown RBP23.96■■□□□ 1.43
CHRNA3-202ENST00000348639 NAP1L2Q9ULW6 460 aaPredicted RBP23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms