RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 EZH2Q15910 746 aaKnown RBP16.23■□□□□ 0.19
CDC42-202ENST00000344548 RNF20Q5VTR2 975 aa16.23■□□□□ 0.19
CDC42-202ENST00000344548 GPR101Q96P66 508 aaPredicted RBP16.23■□□□□ 0.19
CDC42-202ENST00000344548 PNPLA7Q6ZV29 1317 aa16.23■□□□□ 0.19
CDC42-202ENST00000344548 GRAPQ13588 217 aa16.22■□□□□ 0.19
CDC42-202ENST00000344548 MAGEB6Q8N7X4 407 aa16.22■□□□□ 0.19
CDC42-202ENST00000344548 GRAPLQ8TC17 118 aaPredicted RBP16.22■□□□□ 0.19
CDC42-202ENST00000344548 CIZ1Q9ULV3 898 aaPredicted RBP16.22■□□□□ 0.19
CDC42-202ENST00000344548 ZDHHC9Q9Y397 364 aa16.22■□□□□ 0.19
CDC42-202ENST00000344548 IRS2Q9Y4H2 1338 aa16.22■□□□□ 0.19
CDC42-202ENST00000344548 FGAP02671 866 aa16.22■□□□□ 0.19
CDC42-202ENST00000344548 RPS6KB1P23443 525 aa16.22■□□□□ 0.19
CDC42-202ENST00000344548 UBE3CQ15386 1083 aa16.22■□□□□ 0.19
CDC42-202ENST00000344548 MSL1Q68DK7 614 aa16.22■□□□□ 0.19
CDC42-202ENST00000344548 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.22■□□□□ 0.19
CDC42-202ENST00000344548 TPCN1Q9ULQ1 816 aa16.22■□□□□ 0.19
CDC42-202ENST00000344548 DOCK2Q92608 1830 aa16.21■□□□□ 0.19
CDC42-202ENST00000344548 HAND2P61296 217 aa16.21■□□□□ 0.19
CDC42-202ENST00000344548 TOB2Q14106 344 aaPredicted RBP16.21■□□□□ 0.19
CDC42-202ENST00000344548 BLOC1S2Q6QNY1 142 aa16.21■□□□□ 0.19
CDC42-202ENST00000344548 FBXO33Q7Z6M2 555 aa16.21■□□□□ 0.19
CDC42-202ENST00000344548 ADGRA1Q86SQ6 560 aa16.21■□□□□ 0.19
CDC42-202ENST00000344548 NKX2-3Q8TAU0 364 aa16.21■□□□□ 0.19
CDC42-202ENST00000344548 FBXO41Q8TF61 875 aa16.21■□□□□ 0.19
CDC42-202ENST00000344548 ME3Q16798 604 aa16.21■□□□□ 0.19
CDC42-202ENST00000344548 CHAMP1Q96JM3 812 aa16.21■□□□□ 0.19
CDC42-202ENST00000344548 NEK1Q96PY6 1258 aa16.21■□□□□ 0.19
CDC42-202ENST00000344548 LRRC2Q9BYS8 371 aa16.21■□□□□ 0.19
CDC42-202ENST00000344548 LIMCH1Q9UPQ0 1083 aa16.21■□□□□ 0.19
CDC42-202ENST00000344548 ZNF384Q8TF68 577 aa16.2■□□□□ 0.18
CDC42-202ENST00000344548 ABCF2Q9UG63 623 aa16.2■□□□□ 0.18
CDC42-202ENST00000344548 JAG2Q9Y219 1238 aa16.2■□□□□ 0.18
CDC42-202ENST00000344548 ST5P78524 1137 aa16.2■□□□□ 0.18
CDC42-202ENST00000344548 LRRFIP1Q32MZ4 808 aaKnown RBP16.2■□□□□ 0.18
CDC42-202ENST00000344548 NECAB1Q8N987 351 aa16.2■□□□□ 0.18
CDC42-202ENST00000344548 DENND2AQ9ULE3 1009 aa16.2■□□□□ 0.18
CDC42-202ENST00000344548 E7EWF7 191 aa16.19■□□□□ 0.18
CDC42-202ENST00000344548 PSMA5P28066 241 aa16.19■□□□□ 0.18
CDC42-202ENST00000344548 CAVIN4Q5BKX8 364 aa16.19■□□□□ 0.18
CDC42-202ENST00000344548 RPGRQ92834 1020 aaKnown RBP16.19■□□□□ 0.18
CDC42-202ENST00000344548 CAMKK2Q96RR4 588 aa16.19■□□□□ 0.18
CDC42-202ENST00000344548 STRBPQ96SI9 672 aaKnown RBP16.19■□□□□ 0.18
CDC42-202ENST00000344548 ANKRD2Q9GZV1 360 aa16.19■□□□□ 0.18
CDC42-202ENST00000344548 LAMA4Q16363 1823 aa16.19■□□□□ 0.18
CDC42-202ENST00000344548 MCM4P33991 863 aa16.19■□□□□ 0.18
CDC42-202ENST00000344548 ZSCAN25Q6NSZ9 544 aa16.19■□□□□ 0.18
CDC42-202ENST00000344548 CHST3Q7LGC8 479 aa16.19■□□□□ 0.18
CDC42-202ENST00000344548 VPS37DQ86XT2 251 aa16.19■□□□□ 0.18
CDC42-202ENST00000344548 PDGFDQ9GZP0 370 aaPredicted RBP16.19■□□□□ 0.18
CDC42-202ENST00000344548 NBPF3Q9H094 633 aa16.19■□□□□ 0.18
CDC42-202ENST00000344548 ARMT1Q9H993 441 aa16.19■□□□□ 0.18
CDC42-202ENST00000344548 ANKRD31Q8N7Z5 1873 aa16.19■□□□□ 0.18
CDC42-202ENST00000344548 PRKAB2O43741 272 aa16.18■□□□□ 0.18
CDC42-202ENST00000344548 MMP10P09238 476 aa16.18■□□□□ 0.18
CDC42-202ENST00000344548 GPSM2P81274 684 aa16.18■□□□□ 0.18
CDC42-202ENST00000344548 MAP3K12Q12852 859 aa16.18■□□□□ 0.18
CDC42-202ENST00000344548 FOXD4L5Q5VV16 416 aaPredicted RBP16.18■□□□□ 0.18
CDC42-202ENST00000344548 CCDC83Q8IWF9 413 aa16.18■□□□□ 0.18
CDC42-202ENST00000344548 MIGA1Q8NAN2 632 aa16.18■□□□□ 0.18
CDC42-202ENST00000344548 FOXD4L4Q8WXT5 416 aaPredicted RBP16.18■□□□□ 0.18
CDC42-202ENST00000344548 INTS4Q96HW7 963 aaKnown RBP16.18■□□□□ 0.18
CDC42-202ENST00000344548 ANKIB1Q9P2G1 1089 aa16.18■□□□□ 0.18
CDC42-202ENST00000344548 LRP2BPQ9P2M1 347 aa16.18■□□□□ 0.18
CDC42-202ENST00000344548 KLRG2A4D1S0 409 aaPredicted RBP16.17■□□□□ 0.18
CDC42-202ENST00000344548 MBD4O95243 580 aa16.17■□□□□ 0.18
CDC42-202ENST00000344548 OLFM4Q6UX06 510 aa16.17■□□□□ 0.18
CDC42-202ENST00000344548 NLGN1Q8N2Q7 840 aa16.17■□□□□ 0.18
CDC42-202ENST00000344548 CWC22Q9HCG8 908 aaKnown RBP16.17■□□□□ 0.18
CDC42-202ENST00000344548 EPB41L4AQ9HCS5 686 aaPredicted RBP16.17■□□□□ 0.18
CDC42-202ENST00000344548 HIBADHP31937 336 aaKnown RBP16.17■□□□□ 0.18
CDC42-202ENST00000344548 LCORLQ8N3X6 602 aa16.17■□□□□ 0.18
CDC42-202ENST00000344548 KRT32Q14532 448 aa16.16■□□□□ 0.18
CDC42-202ENST00000344548 DEFB132Q7Z7B7 95 aa16.16■□□□□ 0.18
CDC42-202ENST00000344548 NSFL1CQ9UNZ2 370 aaKnown RBP16.16■□□□□ 0.18
CDC42-202ENST00000344548 HOXA10P31260 410 aaPredicted RBP16.16■□□□□ 0.18
CDC42-202ENST00000344548 Q6ZUG5 572 aa16.16■□□□□ 0.18
CDC42-202ENST00000344548 AIDAQ96BJ3 306 aa16.16■□□□□ 0.18
CDC42-202ENST00000344548 INCENPQ9NQS7 918 aa16.16■□□□□ 0.18
CDC42-202ENST00000344548 GPHNQ9NQX3 736 aaPredicted RBP16.16■□□□□ 0.18
CDC42-202ENST00000344548 EXOSC10Q01780 885 aaKnown RBP16.15■□□□□ 0.18
CDC42-202ENST00000344548 GNL3LQ9NVN8 582 aaKnown RBP16.15■□□□□ 0.18
CDC42-202ENST00000344548 RAI14Q9P0K7 980 aa16.15■□□□□ 0.18
CDC42-202ENST00000344548 TACC3Q9Y6A5 838 aa16.15■□□□□ 0.18
CDC42-202ENST00000344548 CACNA1SQ13698 1873 aa16.15■□□□□ 0.18
CDC42-202ENST00000344548 SMIM22K7EJ46 135 aa16.15■□□□□ 0.18
CDC42-202ENST00000344548 APPP05067 770 aa16.15■□□□□ 0.18
CDC42-202ENST00000344548 PRDX5P30044 214 aa16.15■□□□□ 0.18
CDC42-202ENST00000344548 CHAF1AQ13111 956 aaPredicted RBP16.15■□□□□ 0.18
CDC42-202ENST00000344548 STK3Q13188 491 aa16.15■□□□□ 0.18
CDC42-202ENST00000344548 ALDH8A1Q9H2A2 487 aaPredicted RBP16.15■□□□□ 0.18
CDC42-202ENST00000344548 NRXN2Q9P2S2 1712 aa16.14■□□□□ 0.17
CDC42-202ENST00000344548 XDHP47989 1333 aa16.14■□□□□ 0.17
CDC42-202ENST00000344548 GSG1L2A8MUP6 293 aa16.14■□□□□ 0.17
CDC42-202ENST00000344548 CYP7A1P22680 504 aa16.14■□□□□ 0.17
CDC42-202ENST00000344548 GRIK5Q16478 980 aa16.14■□□□□ 0.17
CDC42-202ENST00000344548 RBM17Q96I25 401 aaKnown RBP16.14■□□□□ 0.17
CDC42-202ENST00000344548 SLC15A2Q16348 729 aa16.14■□□□□ 0.17
CDC42-202ENST00000344548 DHX32Q7L7V1 743 aaKnown RBP16.14■□□□□ 0.17
CDC42-202ENST00000344548 TBC1D10CQ8IV04 446 aa16.14■□□□□ 0.17
CDC42-202ENST00000344548 BRF1Q92994 677 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms