RNA–Protein interactions for RNA: ENST00000341547.8

LMO7-202, Transcript of LIM domain 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LMO7, Length 7,237 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-202ENST00000341547 TTF1Q15361 905 aaPredicted RBP8.41□□□□□ -1.06
LMO7-202ENST00000341547 PPP1R42Q7Z4L9 355 aa8.41□□□□□ -1.06
LMO7-202ENST00000341547 PPFIBP2Q8ND30 876 aa8.41□□□□□ -1.06
LMO7-202ENST00000341547 CCDC77Q9BR77 488 aa8.41□□□□□ -1.06
LMO7-202ENST00000341547 DNAI2Q9GZS0 605 aa8.41□□□□□ -1.06
LMO7-202ENST00000341547 ERCC3P19447 782 aa8.41□□□□□ -1.06
LMO7-202ENST00000341547 CCT6AP40227 531 aaKnown RBP8.41□□□□□ -1.06
LMO7-202ENST00000341547 PPFIA1Q13136 1202 aa8.41□□□□□ -1.06
LMO7-202ENST00000341547 NCOA7Q8NI08 942 aa8.41□□□□□ -1.06
LMO7-202ENST00000341547 KIF3CO14782 793 aa8.41□□□□□ -1.06
LMO7-202ENST00000341547 ZC3H6P61129 1189 aaKnown RBP8.41□□□□□ -1.06
LMO7-202ENST00000341547 TNNC1P63316 161 aa8.41□□□□□ -1.06
LMO7-202ENST00000341547 IRX5P78411 483 aaPredicted RBP8.41□□□□□ -1.06
LMO7-202ENST00000341547 SETDB1Q15047 1291 aa8.41□□□□□ -1.06
LMO7-202ENST00000341547 INTS8Q75QN2 995 aaKnown RBP8.41□□□□□ -1.06
LMO7-202ENST00000341547 FAM71BQ8TC56 605 aa8.41□□□□□ -1.06
LMO7-202ENST00000341547 RBM8AQ9Y5S9 174 aaKnown RBP8.41□□□□□ -1.06
LMO7-202ENST00000341547 GOLGA8KD6RF30 607 aa8.4□□□□□ -1.06
LMO7-202ENST00000341547 SH3BGRP55822 239 aaPredicted RBP8.4□□□□□ -1.06
LMO7-202ENST00000341547 VCXQ9H320 206 aa8.4□□□□□ -1.06
LMO7-202ENST00000341547 CCDC174Q6PII3 467 aa8.4□□□□□ -1.06
LMO7-202ENST00000341547 MAP3K2Q9Y2U5 619 aa8.4□□□□□ -1.06
LMO7-202ENST00000341547 ARHGEF12Q9NZN5 1544 aa8.4□□□□□ -1.06
LMO7-202ENST00000341547 GOLGA6BA6NDN3 693 aa8.4□□□□□ -1.06
LMO7-202ENST00000341547 ARHGAP6O43182 974 aa8.4□□□□□ -1.06
LMO7-202ENST00000341547 BRD1O95696 1058 aa8.4□□□□□ -1.06
LMO7-202ENST00000341547 EEF2P13639 858 aaKnown RBP8.4□□□□□ -1.06
LMO7-202ENST00000341547 MAP3K9P80192 1104 aa8.4□□□□□ -1.06
LMO7-202ENST00000341547 BRAPQ7Z569 592 aa8.4□□□□□ -1.06
LMO7-202ENST00000341547 FERMT1Q9BQL6 677 aa8.4□□□□□ -1.06
LMO7-202ENST00000341547 PHF23Q9BUL5 403 aaPredicted RBP8.4□□□□□ -1.06
LMO7-202ENST00000341547 FAM114A2Q9NRY5 505 aa8.4□□□□□ -1.06
LMO7-202ENST00000341547 ANAPC4Q9UJX5 808 aa8.4□□□□□ -1.06
LMO7-202ENST00000341547 STARD3NLO95772 234 aa8.4□□□□□ -1.07
LMO7-202ENST00000341547 TSNAXIP1Q2TAA8 658 aa8.4□□□□□ -1.07
LMO7-202ENST00000341547 LMBR1Q8WVP7 490 aa8.4□□□□□ -1.07
LMO7-202ENST00000341547 MRVI1Q9Y6F6 885 aa8.4□□□□□ -1.07
LMO7-202ENST00000341547 PIK3R4Q99570 1358 aa8.4□□□□□ -1.07
LMO7-202ENST00000341547 RFC1P35251 1148 aaPredicted RBP8.4□□□□□ -1.07
LMO7-202ENST00000341547 PRPHP41219 470 aa8.4□□□□□ -1.07
LMO7-202ENST00000341547 CCDC38Q502W7 563 aa8.4□□□□□ -1.07
LMO7-202ENST00000341547 WDR78Q5VTH9 848 aa8.4□□□□□ -1.07
LMO7-202ENST00000341547 CACNA2D3Q8IZS8 1091 aa8.4□□□□□ -1.07
LMO7-202ENST00000341547 ARHGEF2Q92974 986 aaKnown RBP8.4□□□□□ -1.07
LMO7-202ENST00000341547 LRRC27Q9C0I9 530 aa8.4□□□□□ -1.07
LMO7-202ENST00000341547 GRIN2BQ13224 1484 aa8.4□□□□□ -1.07
LMO7-202ENST00000341547 PSMA7O14818 248 aa8.39□□□□□ -1.07
LMO7-202ENST00000341547 GADD45BO75293 160 aaPredicted RBP8.39□□□□□ -1.07
LMO7-202ENST00000341547 GCKP35557 465 aa8.39□□□□□ -1.07
LMO7-202ENST00000341547 CEP85LQ5SZL2 805 aa8.39□□□□□ -1.07
LMO7-202ENST00000341547 GBP7Q8N8V2 638 aaPredicted RBP8.39□□□□□ -1.07
LMO7-202ENST00000341547 BICD1Q96G01 975 aa8.39□□□□□ -1.07
LMO7-202ENST00000341547 MED4Q9NPJ6 270 aa8.39□□□□□ -1.07
LMO7-202ENST00000341547 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.39□□□□□ -1.074e-6■□□□□ 9.6
LMO7-202ENST00000341547 LUC7L2Q9Y383 392 aaKnown RBP8.39□□□□□ -1.07
LMO7-202ENST00000341547 TTC41PQ6P2S7 1318 aa8.39□□□□□ -1.07
LMO7-202ENST00000341547 ZBTB43O43298 467 aa8.39□□□□□ -1.07
LMO7-202ENST00000341547 GIGYF1O75420 1035 aaPredicted RBP8.39□□□□□ -1.07
LMO7-202ENST00000341547 MYCNP04198 464 aaPredicted RBP8.39□□□□□ -1.07
LMO7-202ENST00000341547 UAP1Q16222 522 aaPredicted RBP8.39□□□□□ -1.07
LMO7-202ENST00000341547 CYP26C1Q6V0L0 522 aa8.39□□□□□ -1.07
LMO7-202ENST00000341547 MPRIPQ6WCQ1 1025 aa8.39□□□□□ -1.07
LMO7-202ENST00000341547 RPUSD2Q8IZ73 545 aaKnown RBP8.39□□□□□ -1.07
LMO7-202ENST00000341547 RHPN1Q8TCX5 695 aa8.39□□□□□ -1.07
LMO7-202ENST00000341547 KAT14Q9H8E8 782 aa8.39□□□□□ -1.07
LMO7-202ENST00000341547 STX8Q9UNK0 236 aa8.39□□□□□ -1.07
LMO7-202ENST00000341547 NESP48681 1621 aa8.39□□□□□ -1.07
LMO7-202ENST00000341547 ATP5J2-PTCD1G3V325 749 aa8.39□□□□□ -1.07
LMO7-202ENST00000341547 SLC5A1P13866 664 aa8.39□□□□□ -1.07
LMO7-202ENST00000341547 CHMLP26374 656 aa8.39□□□□□ -1.07
LMO7-202ENST00000341547 PPP1R7Q15435 360 aa8.39□□□□□ -1.07
LMO7-202ENST00000341547 DIXDC1Q155Q3 683 aa8.39□□□□□ -1.07
LMO7-202ENST00000341547 MRRFQ96E11 262 aaKnown RBP8.39□□□□□ -1.07
LMO7-202ENST00000341547 CAPN7Q9Y6W3 813 aa8.39□□□□□ -1.07
LMO7-202ENST00000341547 TTC36A6NLP5 189 aa8.39□□□□□ -1.07
LMO7-202ENST00000341547 GPTP24298 496 aa8.39□□□□□ -1.07
LMO7-202ENST00000341547 WHAMMP3Q1A5X7 153 aa8.39□□□□□ -1.07
LMO7-202ENST00000341547 STXBP4Q6ZWJ1 553 aa8.39□□□□□ -1.07
LMO7-202ENST00000341547 GPT2Q8TD30 523 aa8.39□□□□□ -1.07
LMO7-202ENST00000341547 PPFIA4O75335 1185 aa8.39□□□□□ -1.07
LMO7-202ENST00000341547 ASIC1P78348 528 aa8.39□□□□□ -1.07
LMO7-202ENST00000341547 ATP8B2P98198 1209 aa8.39□□□□□ -1.07
LMO7-202ENST00000341547 FANCCQ00597 558 aa8.39□□□□□ -1.07
LMO7-202ENST00000341547 CCDC122Q5T0U0 273 aa8.39□□□□□ -1.07
LMO7-202ENST00000341547 ZNF354CQ86Y25 554 aa8.39□□□□□ -1.07
LMO7-202ENST00000341547 CCDC170Q8IYT3 715 aa8.39□□□□□ -1.07
LMO7-202ENST00000341547 SMC1BQ8NDV3 1235 aa8.39□□□□□ -1.07
LMO7-202ENST00000341547 ANTXR1Q9H6X2 564 aa8.39□□□□□ -1.07
LMO7-202ENST00000341547 NLRP12P59046 1061 aa8.38□□□□□ -1.07
LMO7-202ENST00000341547 WTAPQ15007 396 aa8.38□□□□□ -1.07
LMO7-202ENST00000341547 CEP120Q8N960 986 aa8.38□□□□□ -1.07
LMO7-202ENST00000341547 ZNF215Q9UL58 517 aaPredicted RBP8.38□□□□□ -1.07
LMO7-202ENST00000341547 TNNQ9UQP3 1299 aa8.38□□□□□ -1.07
LMO7-202ENST00000341547 AOX1Q06278 1338 aa8.38□□□□□ -1.07
LMO7-202ENST00000341547 UGGT2Q9NYU1 1516 aa8.38□□□□□ -1.07
LMO7-202ENST00000341547 A0A1B0GVL5 298 aa8.38□□□□□ -1.07
LMO7-202ENST00000341547 LUC7L3O95232 432 aaKnown RBP8.38□□□□□ -1.07
LMO7-202ENST00000341547 PSMD6Q15008 389 aa8.38□□□□□ -1.07
LMO7-202ENST00000341547 NUTM2AQ8IVF1 878 aaPredicted RBP8.38□□□□□ -1.07
LMO7-202ENST00000341547 BIVM-ERCC5R4GMW8 1640 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms