RNA–Protein interactions for RNA: ENST00000340612.4

CCDC30-201, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC30, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-201ENST00000340612 MARK1Q9P0L2 795 aa3.18□□□□□ -1.9
CCDC30-201ENST00000340612 PITPNM2Q9BZ72 1349 aa3.18□□□□□ -1.9
CCDC30-201ENST00000340612 A0A1W2PP55 124 aa3.17□□□□□ -1.9
CCDC30-201ENST00000340612 METTL12A8MUP2 240 aa3.17□□□□□ -1.9
CCDC30-201ENST00000340612 ZNF76P36508 570 aa3.17□□□□□ -1.9
CCDC30-201ENST00000340612 TNNI2P48788 182 aa3.17□□□□□ -1.9
CCDC30-201ENST00000340612 LCE4AQ5TA78 99 aa3.17□□□□□ -1.9
CCDC30-201ENST00000340612 FIGNL1Q6PIW4 674 aa3.17□□□□□ -1.9
CCDC30-201ENST00000340612 CRELD1Q96HD1 420 aa3.17□□□□□ -1.9
CCDC30-201ENST00000340612 KRTAP4-5Q9BYR2 181 aa3.17□□□□□ -1.9
CCDC30-201ENST00000340612 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.17□□□□□ -1.9
CCDC30-201ENST00000340612 J3QW42 95 aa3.17□□□□□ -1.9
CCDC30-201ENST00000340612 KCNQ4P56696 695 aa3.17□□□□□ -1.9
CCDC30-201ENST00000340612 NAALADL2Q58DX5 795 aa3.17□□□□□ -1.9
CCDC30-201ENST00000340612 GLIS3Q8NEA6 775 aa3.17□□□□□ -1.9
CCDC30-201ENST00000340612 OR13H1Q8NG92 308 aa3.17□□□□□ -1.9
CCDC30-201ENST00000340612 RNF34Q969K3 372 aa3.17□□□□□ -1.9
CCDC30-201ENST00000340612 ACBD3Q9H3P7 528 aa3.17□□□□□ -1.9
CCDC30-201ENST00000340612 PPP1R1BQ9UD71 204 aaPredicted RBP3.17□□□□□ -1.9
CCDC30-201ENST00000340612 KLF15Q9UIH9 416 aa3.17□□□□□ -1.9
CCDC30-201ENST00000340612 FGFR3P22607 806 aa3.16□□□□□ -1.9
CCDC30-201ENST00000340612 FCGRTP55899 365 aa3.16□□□□□ -1.9
CCDC30-201ENST00000340612 NCAPG2Q86XI2 1143 aa3.16□□□□□ -1.9
CCDC30-201ENST00000340612 ZKSCAN3Q9BRR0 538 aa3.16□□□□□ -1.9
CCDC30-201ENST00000340612 TRIM56Q9BRZ2 755 aaKnown RBP3.16□□□□□ -1.9
CCDC30-201ENST00000340612 EHD4Q9H223 541 aa3.16□□□□□ -1.9
CCDC30-201ENST00000340612 SALL4Q9UJQ4 1053 aa3.16□□□□□ -1.9
CCDC30-201ENST00000340612 PCBP4P57723 403 aaKnown RBP3.16□□□□□ -1.9
CCDC30-201ENST00000340612 DHX32Q7L7V1 743 aaKnown RBP3.16□□□□□ -1.9
CCDC30-201ENST00000340612 POLR3GLQ9BT43 218 aa3.16□□□□□ -1.9
CCDC30-201ENST00000340612 COPRSQ9NQ92 184 aa3.16□□□□□ -1.9
CCDC30-201ENST00000340612 SHROOM4Q9ULL8 1493 aa3.16□□□□□ -1.9
CCDC30-201ENST00000340612 PHF24Q9UPV7 400 aa3.16□□□□□ -1.9
CCDC30-201ENST00000340612 ZBTB42B2RXF5 422 aa3.16□□□□□ -1.9
CCDC30-201ENST00000340612 PSAPP07602 524 aa3.16□□□□□ -1.9
CCDC30-201ENST00000340612 ZC3H6P61129 1189 aaKnown RBP3.16□□□□□ -1.9
CCDC30-201ENST00000340612 RACK1P63244 317 aaKnown RBP3.16□□□□□ -1.9
CCDC30-201ENST00000340612 ATP11AP98196 1134 aa3.16□□□□□ -1.9
CCDC30-201ENST00000340612 LBRQ14739 615 aaKnown RBP3.16□□□□□ -1.9
CCDC30-201ENST00000340612 OSMRQ99650 979 aa3.16□□□□□ -1.9
CCDC30-201ENST00000340612 TLR7Q9NYK1 1049 aaKnown RBP3.16□□□□□ -1.9
CCDC30-201ENST00000340612 FAM8A1Q9UBU6 413 aa3.16□□□□□ -1.9
CCDC30-201ENST00000340612 GGT7Q9UJ14 662 aa3.16□□□□□ -1.9
CCDC30-201ENST00000340612 NAP1L2Q9ULW6 460 aaPredicted RBP3.16□□□□□ -1.9
CCDC30-201ENST00000340612 TTF2Q9UNY4 1162 aaKnown RBP3.16□□□□□ -1.9
CCDC30-201ENST00000340612 AKAP2Q9Y2D5 859 aa3.16□□□□□ -1.9
CCDC30-201ENST00000340612 EDN3P14138 238 aa3.15□□□□□ -1.91
CCDC30-201ENST00000340612 GRIA4P48058 902 aa3.15□□□□□ -1.91
CCDC30-201ENST00000340612 GRIK4Q16099 956 aa3.15□□□□□ -1.91
CCDC30-201ENST00000340612 MAP3K11Q16584 847 aa3.15□□□□□ -1.91
CCDC30-201ENST00000340612 SPRED3Q2MJR0 410 aa3.15□□□□□ -1.91
CCDC30-201ENST00000340612 ADAMTSL4Q6UY14 1074 aa3.15□□□□□ -1.91
CCDC30-201ENST00000340612 FCHSD1Q86WN1 690 aa3.15□□□□□ -1.91
CCDC30-201ENST00000340612 C3orf58Q8NDZ4 430 aa3.15□□□□□ -1.91
CCDC30-201ENST00000340612 LIN7BQ9HAP6 207 aa3.15□□□□□ -1.91
CCDC30-201ENST00000340612 CAPN10Q9HC96 672 aa3.15□□□□□ -1.91
CCDC30-201ENST00000340612 ABCB6Q9NP58 842 aa3.15□□□□□ -1.91
CCDC30-201ENST00000340612 ATXN7L1Q9ULK2 861 aaPredicted RBP3.15□□□□□ -1.91
CCDC30-201ENST00000340612 KIAA0319Q5VV43 1072 aa3.15□□□□□ -1.91
CCDC30-201ENST00000340612 SYT9Q86SS6 491 aa3.15□□□□□ -1.91
CCDC30-201ENST00000340612 ASAP3Q8TDY4 903 aa3.15□□□□□ -1.91
CCDC30-201ENST00000340612 TCF12Q99081 682 aa3.15□□□□□ -1.91
CCDC30-201ENST00000340612 PCGF6Q9BYE7 350 aa3.15□□□□□ -1.91
CCDC30-201ENST00000340612 RASSF4Q9H2L5 321 aa3.15□□□□□ -1.91
CCDC30-201ENST00000340612 CCSER2Q9H7U1 834 aa3.15□□□□□ -1.91
CCDC30-201ENST00000340612 METTL5Q9NRN9 209 aaKnown RBP3.15□□□□□ -1.91
CCDC30-201ENST00000340612 PRR12Q9ULL5 1215 aa3.15□□□□□ -1.91
CCDC30-201ENST00000340612 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.15□□□□□ -1.91
CCDC30-201ENST00000340612 ARAFP10398 606 aa3.14□□□□□ -1.91
CCDC30-201ENST00000340612 ZNF157P51786 506 aaPredicted RBP3.14□□□□□ -1.91
CCDC30-201ENST00000340612 PLAURQ03405 335 aa3.14□□□□□ -1.91
CCDC30-201ENST00000340612 HYAL2Q12891 473 aa3.14□□□□□ -1.91
CCDC30-201ENST00000340612 TAF1CQ15572 869 aaPredicted RBP3.14□□□□□ -1.91
CCDC30-201ENST00000340612 TPTE2Q6XPS3 522 aa3.14□□□□□ -1.91
CCDC30-201ENST00000340612 USP48Q86UV5 1035 aa3.14□□□□□ -1.91
CCDC30-201ENST00000340612 CEP120Q8N960 986 aa3.14□□□□□ -1.91
CCDC30-201ENST00000340612 PMEPA1Q969W9 287 aa3.14□□□□□ -1.91
CCDC30-201ENST00000340612 FRMD6Q96NE9 622 aa3.14□□□□□ -1.91
CCDC30-201ENST00000340612 TINF2Q9BSI4 451 aa3.14□□□□□ -1.91
CCDC30-201ENST00000340612 UBE2OQ9C0C9 1292 aaKnown RBP3.14□□□□□ -1.91
CCDC30-201ENST00000340612 DZANK1Q9NVP4 752 aa3.14□□□□□ -1.91
CCDC30-201ENST00000340612 DNAJB12Q9NXW2 375 aaKnown RBP3.14□□□□□ -1.91
CCDC30-201ENST00000340612 USP31Q70CQ4 1352 aa3.14□□□□□ -1.91
CCDC30-201ENST00000340612 NFKBIEO00221 500 aa3.14□□□□□ -1.91
CCDC30-201ENST00000340612 KIF4AO95239 1232 aa3.14□□□□□ -1.91
CCDC30-201ENST00000340612 APBA3O96018 575 aa3.14□□□□□ -1.91
CCDC30-201ENST00000340612 CPB1P15086 417 aa3.14□□□□□ -1.91
CCDC30-201ENST00000340612 ELNP15502 786 aa3.14□□□□□ -1.91
CCDC30-201ENST00000340612 EIF2AK2P19525 551 aaKnown RBP3.14□□□□□ -1.91
CCDC30-201ENST00000340612 DTHD1Q6ZMT9 781 aa3.14□□□□□ -1.91
CCDC30-201ENST00000340612 C8orf37Q96NL8 207 aa3.14□□□□□ -1.91
CCDC30-201ENST00000340612 KBTBD4Q9NVX7 518 aa3.14□□□□□ -1.91
CCDC30-201ENST00000340612 TMEM238LA0A1B0GVL6 79 aa3.13□□□□□ -1.91
CCDC30-201ENST00000340612 MINDY4BA8MYZ0 360 aa3.13□□□□□ -1.91
CCDC30-201ENST00000340612 CELA3AP09093 270 aa3.13□□□□□ -1.91
CCDC30-201ENST00000340612 H2AFB1P0C5Y9 115 aa3.13□□□□□ -1.91
CCDC30-201ENST00000340612 H2AFB2P0C5Z0 115 aa3.13□□□□□ -1.91
CCDC30-201ENST00000340612 GSTT1P30711 240 aa3.13□□□□□ -1.91
CCDC30-201ENST00000340612 CCDC85BQ15834 202 aaPredicted RBP3.13□□□□□ -1.91
CCDC30-201ENST00000340612 HS2ST1Q7LGA3 356 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms