RNA–Protein interactions for RNA: ENST00000340473.7

GTF2F2-201, Transcript of general transcription factor IIF subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F2, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F2-201ENST00000340473 IL1R1P14778 569 aa16.17■□□□□ 0.18
GTF2F2-201ENST00000340473 SOGA3Q5TF21 947 aa16.17■□□□□ 0.18
GTF2F2-201ENST00000340473 ZBTB22O15209 634 aa16.16■□□□□ 0.18
GTF2F2-201ENST00000340473 TTF1Q15361 905 aaPredicted RBP16.16■□□□□ 0.18
GTF2F2-201ENST00000340473 CASC1Q6TDU7 716 aa16.16■□□□□ 0.18
GTF2F2-201ENST00000340473 PSMD1Q99460 953 aa16.16■□□□□ 0.18
GTF2F2-201ENST00000340473 SYT17Q9BSW7 474 aa16.16■□□□□ 0.18
GTF2F2-201ENST00000340473 JAG2Q9Y219 1238 aa16.16■□□□□ 0.18
GTF2F2-201ENST00000340473 PDS5AQ29RF7 1337 aaKnown RBP16.16■□□□□ 0.18
GTF2F2-201ENST00000340473 CHAF1AQ13111 956 aaPredicted RBP16.15■□□□□ 0.18
GTF2F2-201ENST00000340473 DOK7Q18PE1 504 aa16.15■□□□□ 0.18
GTF2F2-201ENST00000340473 SUPT20HQ8NEM7 779 aa16.15■□□□□ 0.18
GTF2F2-201ENST00000340473 COA1Q9GZY4 146 aa16.15■□□□□ 0.18
GTF2F2-201ENST00000340473 IL25Q9H293 177 aa16.15■□□□□ 0.18
GTF2F2-201ENST00000340473 DIAPH3Q9NSV4 1193 aa16.15■□□□□ 0.18
GTF2F2-201ENST00000340473 RFX7Q2KHR2 1363 aa16.15■□□□□ 0.18
GTF2F2-201ENST00000340473 DOCK2Q92608 1830 aa16.15■□□□□ 0.18
GTF2F2-201ENST00000340473 AOC3Q16853 763 aa16.15■□□□□ 0.18
GTF2F2-201ENST00000340473 SLFNL1Q499Z3 407 aa16.15■□□□□ 0.18
GTF2F2-201ENST00000340473 CWC27Q6UX04 472 aaKnown RBP16.15■□□□□ 0.18
GTF2F2-201ENST00000340473 FAM227BQ96M60 508 aa16.15■□□□□ 0.18
GTF2F2-201ENST00000340473 CHD4Q14839 1912 aa16.15■□□□□ 0.18
GTF2F2-201ENST00000340473 FER1L6Q2WGJ9 1857 aa16.14■□□□□ 0.17
GTF2F2-201ENST00000340473 KIAA2012Q0VF49 1180 aa16.14■□□□□ 0.17
GTF2F2-201ENST00000340473 NMIQ13287 307 aaPredicted RBP16.14■□□□□ 0.17
GTF2F2-201ENST00000340473 ESYT1Q9BSJ8 1104 aa16.14■□□□□ 0.17
GTF2F2-201ENST00000340473 ARFGEF1Q9Y6D6 1849 aa16.14■□□□□ 0.17
GTF2F2-201ENST00000340473 IDH1O75874 414 aaKnown RBP16.14■□□□□ 0.17
GTF2F2-201ENST00000340473 DBNDD1Q9H9R9 158 aa16.14■□□□□ 0.17
GTF2F2-201ENST00000340473 MYH7P12883 1935 aa16.13■□□□□ 0.17
GTF2F2-201ENST00000340473 A0A0D9SFI3 127 aa16.13■□□□□ 0.17
GTF2F2-201ENST00000340473 HIP1O00291 1037 aa16.13■□□□□ 0.17
GTF2F2-201ENST00000340473 MFAP1P55081 439 aaKnown RBP16.13■□□□□ 0.17
GTF2F2-201ENST00000340473 ZNF277Q9NRM2 450 aaPredicted RBP16.13■□□□□ 0.17
GTF2F2-201ENST00000340473 RNF113AO15541 343 aaKnown RBP16.13■□□□□ 0.17
GTF2F2-201ENST00000340473 PPIP5K2O43314 1243 aa16.13■□□□□ 0.17
GTF2F2-201ENST00000340473 ABCF2Q9UG63 623 aa16.13■□□□□ 0.17
GTF2F2-201ENST00000340473 RBM19Q9Y4C8 960 aaKnown RBP16.13■□□□□ 0.17
GTF2F2-201ENST00000340473 NFKBIEO00221 500 aa16.12■□□□□ 0.17
GTF2F2-201ENST00000340473 LRP2BPQ9P2M1 347 aa16.12■□□□□ 0.17
GTF2F2-201ENST00000340473 COL4A5P29400 1685 aa16.12■□□□□ 0.17
GTF2F2-201ENST00000340473 G3V3G9 751 aa16.11■□□□□ 0.17
GTF2F2-201ENST00000340473 SGSM2O43147 1006 aa16.11■□□□□ 0.17
GTF2F2-201ENST00000340473 ECE2O60344 883 aa16.11■□□□□ 0.17
GTF2F2-201ENST00000340473 SLC9C2Q5TAH2 1124 aa16.11■□□□□ 0.17
GTF2F2-201ENST00000340473 DCAF8Q5TAQ9 597 aa16.11■□□□□ 0.17
GTF2F2-201ENST00000340473 TICAM2Q86XR7 235 aa16.11■□□□□ 0.17
GTF2F2-201ENST00000340473 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.11■□□□□ 0.17
GTF2F2-201ENST00000340473 TAOK3Q9H2K8 898 aa16.11■□□□□ 0.17
GTF2F2-201ENST00000340473 PDE6AP16499 860 aa16.11■□□□□ 0.17
GTF2F2-201ENST00000340473 MAP3K12Q12852 859 aa16.11■□□□□ 0.17
GTF2F2-201ENST00000340473 WDR66Q8TBY9 1149 aa16.11■□□□□ 0.17
GTF2F2-201ENST00000340473 SEC62Q99442 399 aaKnown RBP16.11■□□□□ 0.17
GTF2F2-201ENST00000340473 KCNQ5Q9NR82 932 aa16.11■□□□□ 0.17
GTF2F2-201ENST00000340473 SALL1Q9NSC2 1324 aa16.11■□□□□ 0.17
GTF2F2-201ENST00000340473 ZFYP08048 801 aaPredicted RBP16.1■□□□□ 0.17
GTF2F2-201ENST00000340473 ADD2P35612 726 aa16.1■□□□□ 0.17
GTF2F2-201ENST00000340473 LRRFIP1Q32MZ4 808 aaKnown RBP16.1■□□□□ 0.17
GTF2F2-201ENST00000340473 ZMYM1Q5SVZ6 1142 aa16.1■□□□□ 0.17
GTF2F2-201ENST00000340473 PODNQ7Z5L7 613 aa16.1■□□□□ 0.17
GTF2F2-201ENST00000340473 RUFY2Q8WXA3 655 aa16.1■□□□□ 0.17
GTF2F2-201ENST00000340473 FAM205AQ6ZU69 1335 aa16.1■□□□□ 0.17
GTF2F2-201ENST00000340473 SCN9AQ15858 1988 aa16.1■□□□□ 0.17
GTF2F2-201ENST00000340473 PRDX5P30044 214 aa16.1■□□□□ 0.17
GTF2F2-201ENST00000340473 GTF2IP78347 998 aa16.1■□□□□ 0.17
GTF2F2-201ENST00000340473 MAGEB6Q8N7X4 407 aa16.1■□□□□ 0.17
GTF2F2-201ENST00000340473 RAI14Q9P0K7 980 aa16.1■□□□□ 0.17
GTF2F2-201ENST00000340473 TCRBV5S4A2TA0A5A2 114 aa16.09■□□□□ 0.17
GTF2F2-201ENST00000340473 GRIK5Q16478 980 aa16.09■□□□□ 0.17
GTF2F2-201ENST00000340473 ZSCAN25Q6NSZ9 544 aa16.09■□□□□ 0.17
GTF2F2-201ENST00000340473 ZNF589Q86UQ0 364 aaPredicted RBP16.09■□□□□ 0.17
GTF2F2-201ENST00000340473 LARGE2Q8N3Y3 721 aa16.09■□□□□ 0.17
GTF2F2-201ENST00000340473 FBXW7Q969H0 707 aa16.09■□□□□ 0.17
GTF2F2-201ENST00000340473 OSBP2Q969R2 916 aa16.09■□□□□ 0.17
GTF2F2-201ENST00000340473 VPS33BQ9H267 617 aa16.09■□□□□ 0.17
GTF2F2-201ENST00000340473 ZNF532Q9HCE3 1301 aa16.09■□□□□ 0.17
GTF2F2-201ENST00000340473 YDJCA8MPS7 323 aa16.09■□□□□ 0.17
GTF2F2-201ENST00000340473 IARSP41252 1262 aaKnown RBP16.09■□□□□ 0.17
GTF2F2-201ENST00000340473 RASSF7Q02833 373 aa16.09■□□□□ 0.17
GTF2F2-201ENST00000340473 UBE3CQ15386 1083 aa16.09■□□□□ 0.17
GTF2F2-201ENST00000340473 TTLL5Q6EMB2 1281 aa16.09■□□□□ 0.17
GTF2F2-201ENST00000340473 CCDC129Q6ZRS4 1044 aa16.09■□□□□ 0.17
GTF2F2-201ENST00000340473 ERICH6Q7L0X2 663 aa16.09■□□□□ 0.17
GTF2F2-201ENST00000340473 ZNF384Q8TF68 577 aa16.09■□□□□ 0.17
GTF2F2-201ENST00000340473 RAD50Q92878 1312 aa16.08■□□□□ 0.17
GTF2F2-201ENST00000340473 M0R2C6 588 aa16.08■□□□□ 0.16
GTF2F2-201ENST00000340473 MCMDC2Q4G0Z9 681 aa16.08■□□□□ 0.16
GTF2F2-201ENST00000340473 MFSD14BQ5SR56 506 aa16.08■□□□□ 0.16
GTF2F2-201ENST00000340473 ZGPATQ8N5A5 531 aaKnown RBP16.08■□□□□ 0.16
GTF2F2-201ENST00000340473 HELLSQ9NRZ9 838 aa16.08■□□□□ 0.16
GTF2F2-201ENST00000340473 MAST3O60307 1309 aa16.08■□□□□ 0.16
GTF2F2-201ENST00000340473 ZNF646O15015 1829 aaPredicted RBP16.08■□□□□ 0.16
GTF2F2-201ENST00000340473 MECOMQ03112 1051 aa16.07■□□□□ 0.16
GTF2F2-201ENST00000340473 APPBP2Q92624 585 aa16.07■□□□□ 0.16
GTF2F2-201ENST00000340473 NSUN4Q96CB9 384 aaKnown RBP16.07■□□□□ 0.16
GTF2F2-201ENST00000340473 MXD3Q9BW11 206 aa16.07■□□□□ 0.16
GTF2F2-201ENST00000340473 PUS7LQ9H0K6 701 aaKnown RBP16.07■□□□□ 0.16
GTF2F2-201ENST00000340473 LTBP3Q9NS15 1303 aa16.07■□□□□ 0.16
GTF2F2-201ENST00000340473 MAST2Q6P0Q8 1798 aa16.07■□□□□ 0.16
GTF2F2-201ENST00000340473 UTRNP46939 3433 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms