RNA–Protein interactions for RNA: ENST00000331728.8

LIMK2-201, Transcript of LIM domain kinase 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIMK2, Length 3,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-201ENST00000331728 ZNF609O15014 1411 aa10.1□□□□□ -0.79
LIMK2-201ENST00000331728 ZNF213O14771 459 aa10.1□□□□□ -0.79
LIMK2-201ENST00000331728 CDKL5O76039 1030 aa10.1□□□□□ -0.79
LIMK2-201ENST00000331728 HSPD1P10809 573 aaKnown RBP10.1□□□□□ -0.79
LIMK2-201ENST00000331728 MARCKSP29966 332 aaPredicted RBP10.1□□□□□ -0.79
LIMK2-201ENST00000331728 PDIA3P30101 505 aaKnown RBP10.1□□□□□ -0.79
LIMK2-201ENST00000331728 STOX1Q6ZVD7 989 aa10.1□□□□□ -0.79
LIMK2-201ENST00000331728 CREBRFQ8IUR6 639 aa10.1□□□□□ -0.79
LIMK2-201ENST00000331728 NCOA7Q8NI08 942 aa10.1□□□□□ -0.79
LIMK2-201ENST00000331728 TIGD1Q96MW7 591 aa10.1□□□□□ -0.79
LIMK2-201ENST00000331728 SH3TC1Q8TE82 1336 aa10.1□□□□□ -0.79
LIMK2-201ENST00000331728 SYKP43405 635 aa10.1□□□□□ -0.79
LIMK2-201ENST00000331728 FAM193AP78312 1265 aa10.1□□□□□ -0.79
LIMK2-201ENST00000331728 ADALQ6DHV7 355 aa10.1□□□□□ -0.79
LIMK2-201ENST00000331728 TTLL5Q6EMB2 1281 aa10.1□□□□□ -0.79
LIMK2-201ENST00000331728 BRAPQ7Z569 592 aa10.1□□□□□ -0.79
LIMK2-201ENST00000331728 PLBD2Q8NHP8 589 aa10.1□□□□□ -0.79
LIMK2-201ENST00000331728 ZNF274Q96GC6 653 aaPredicted RBP10.1□□□□□ -0.79
LIMK2-201ENST00000331728 XPO4Q9C0E2 1151 aaKnown RBP10.1□□□□□ -0.79
LIMK2-201ENST00000331728 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.1□□□□□ -0.79
LIMK2-201ENST00000331728 CALCOCO1Q9P1Z2 691 aa10.1□□□□□ -0.79
LIMK2-201ENST00000331728 IMPACTQ9P2X3 320 aa10.1□□□□□ -0.79
LIMK2-201ENST00000331728 A0A1B0GUL7 405 aa10.09□□□□□ -0.79
LIMK2-201ENST00000331728 URI1O94763 535 aaPredicted RBP10.09□□□□□ -0.79
LIMK2-201ENST00000331728 SAFBQ15424 915 aaKnown RBP eCLIP10.09□□□□□ -0.79
LIMK2-201ENST00000331728 HSP90AB3PQ58FF7 597 aa10.09□□□□□ -0.79
LIMK2-201ENST00000331728 CCDC34Q96HJ3 373 aa10.09□□□□□ -0.79
LIMK2-201ENST00000331728 KIAA1468Q9P260 1216 aa10.09□□□□□ -0.79
LIMK2-201ENST00000331728 RFX7Q2KHR2 1363 aa10.09□□□□□ -0.79
LIMK2-201ENST00000331728 TOP1P11387 765 aaKnown RBP10.09□□□□□ -0.79
LIMK2-201ENST00000331728 NDUFA8P51970 172 aa10.09□□□□□ -0.79
LIMK2-201ENST00000331728 ZNF594Q96JF6 807 aaPredicted RBP10.09□□□□□ -0.79
LIMK2-201ENST00000331728 DNAI1Q9UI46 699 aa10.09□□□□□ -0.79
LIMK2-201ENST00000331728 AKAP2Q9Y2D5 859 aa10.09□□□□□ -0.79
LIMK2-201ENST00000331728 CARMIL3Q8ND23 1372 aa10.09□□□□□ -0.79
LIMK2-201ENST00000331728 EYA2O00167 538 aa10.09□□□□□ -0.79
LIMK2-201ENST00000331728 ZMYM1Q5SVZ6 1142 aa10.09□□□□□ -0.79
LIMK2-201ENST00000331728 TEX35Q5T0J7 233 aa10.09□□□□□ -0.79
LIMK2-201ENST00000331728 DHX40Q8IX18 779 aaKnown RBP10.09□□□□□ -0.79
LIMK2-201ENST00000331728 SYTL4Q96C24 671 aaPredicted RBP10.09□□□□□ -0.79
LIMK2-201ENST00000331728 NOL10Q9BSC4 688 aaKnown RBP10.09□□□□□ -0.79
LIMK2-201ENST00000331728 SLIT1O75093 1534 aa10.08□□□□□ -0.8
LIMK2-201ENST00000331728 YEATS4O95619 227 aa10.08□□□□□ -0.8
LIMK2-201ENST00000331728 ZFYP08048 801 aaPredicted RBP10.08□□□□□ -0.8
LIMK2-201ENST00000331728 PHKG2P15735 406 aa10.08□□□□□ -0.8
LIMK2-201ENST00000331728 UBASH3AP57075 661 aa10.08□□□□□ -0.8
LIMK2-201ENST00000331728 DPCR1Q3MIW9 517 aa10.08□□□□□ -0.8
LIMK2-201ENST00000331728 TMCO3Q6UWJ1 677 aa10.08□□□□□ -0.8
LIMK2-201ENST00000331728 DCAF5Q96JK2 942 aa10.08□□□□□ -0.8
LIMK2-201ENST00000331728 PXDNQ92626 1479 aa10.08□□□□□ -0.8
LIMK2-201ENST00000331728 MAST3O60307 1309 aa10.08□□□□□ -0.8
LIMK2-201ENST00000331728 ZNF202O95125 648 aa10.08□□□□□ -0.8
LIMK2-201ENST00000331728 PDIA6Q15084 440 aa10.08□□□□□ -0.8
LIMK2-201ENST00000331728 MYSM1Q5VVJ2 828 aa10.08□□□□□ -0.8
LIMK2-201ENST00000331728 ANO1Q5XXA6 986 aa10.08□□□□□ -0.8
LIMK2-201ENST00000331728 ALG1Q9BT22 464 aa10.08□□□□□ -0.8
LIMK2-201ENST00000331728 KCND1Q9NSA2 647 aa10.08□□□□□ -0.8
LIMK2-201ENST00000331728 RTEL1Q9NZ71 1219 aa10.08□□□□□ -0.8
LIMK2-201ENST00000331728 A0A1W2PQ27 194 aa10.08□□□□□ -0.8
LIMK2-201ENST00000331728 A0A1W2PQ64 194 aa10.08□□□□□ -0.8
LIMK2-201ENST00000331728 A0A1W2PQD8 194 aa10.08□□□□□ -0.8
LIMK2-201ENST00000331728 ATP2B1P20020 1258 aa10.08□□□□□ -0.8
LIMK2-201ENST00000331728 METAP2P50579 478 aaKnown RBP eCLIP10.08□□□□□ -0.8
LIMK2-201ENST00000331728 CHRNA2Q15822 529 aa10.08□□□□□ -0.8
LIMK2-201ENST00000331728 CLIC4Q9Y696 253 aa10.08□□□□□ -0.8
LIMK2-201ENST00000331728 ZSCAN12O43309 604 aa10.07□□□□□ -0.8
LIMK2-201ENST00000331728 IDH1O75874 414 aaKnown RBP10.07□□□□□ -0.8
LIMK2-201ENST00000331728 ATF3P18847 181 aa10.07□□□□□ -0.8
LIMK2-201ENST00000331728 NLRP12P59046 1061 aa10.07□□□□□ -0.8
LIMK2-201ENST00000331728 ERCC6LQ2NKX8 1250 aa10.07□□□□□ -0.8
LIMK2-201ENST00000331728 MICU3Q86XE3 530 aa10.07□□□□□ -0.8
LIMK2-201ENST00000331728 OSBPL5Q9H0X9 879 aaPredicted RBP10.07□□□□□ -0.8
LIMK2-201ENST00000331728 FAM53CQ9NYF3 392 aa10.07□□□□□ -0.8
LIMK2-201ENST00000331728 TBC1D2BQ9UPU7 963 aa10.07□□□□□ -0.8
LIMK2-201ENST00000331728 NWD1Q149M9 1564 aa10.07□□□□□ -0.8
LIMK2-201ENST00000331728 A0A0G2JS52 829 aa10.07□□□□□ -0.8
LIMK2-201ENST00000331728 TUBB4AP04350 444 aa10.07□□□□□ -0.8
LIMK2-201ENST00000331728 TRHP20396 242 aaPredicted RBP10.07□□□□□ -0.8
LIMK2-201ENST00000331728 FANCCQ00597 558 aa10.07□□□□□ -0.8
LIMK2-201ENST00000331728 ARHGAP29Q52LW3 1261 aa10.07□□□□□ -0.8
LIMK2-201ENST00000331728 CNNM3Q8NE01 707 aa10.07□□□□□ -0.8
LIMK2-201ENST00000331728 AXIN2Q9Y2T1 843 aa10.07□□□□□ -0.8
LIMK2-201ENST00000331728 METTL24Q5JXM2 366 aa10.06□□□□□ -0.8
LIMK2-201ENST00000331728 STK11IPQ8N1F8 1099 aa10.06□□□□□ -0.8
LIMK2-201ENST00000331728 LINC00301Q8NCQ3 95 aa10.06□□□□□ -0.8
LIMK2-201ENST00000331728 PPP1R13BQ96KQ4 1090 aa10.06□□□□□ -0.8
LIMK2-201ENST00000331728 GPHNQ9NQX3 736 aaPredicted RBP10.06□□□□□ -0.8
LIMK2-201ENST00000331728 ERBB3P21860 1342 aa10.06□□□□□ -0.8
LIMK2-201ENST00000331728 PSDA5PKW4 1024 aaPredicted RBP10.06□□□□□ -0.8
LIMK2-201ENST00000331728 LRRC24Q50LG9 513 aa10.06□□□□□ -0.8
LIMK2-201ENST00000331728 FMR1NBQ8N0W7 255 aaPredicted RBP10.06□□□□□ -0.8
LIMK2-201ENST00000331728 L2HGDHQ9H9P8 463 aa10.06□□□□□ -0.8
LIMK2-201ENST00000331728 ST7Q9NRC1 585 aa10.06□□□□□ -0.8
LIMK2-201ENST00000331728 CNNM1Q9NRU3 951 aa10.06□□□□□ -0.8
LIMK2-201ENST00000331728 CTDNEP1O95476 244 aa10.06□□□□□ -0.8
LIMK2-201ENST00000331728 PFKFB1P16118 471 aa10.06□□□□□ -0.8
LIMK2-201ENST00000331728 RFX5P48382 616 aaPredicted RBP10.06□□□□□ -0.8
LIMK2-201ENST00000331728 MYL5Q02045 173 aa10.06□□□□□ -0.8
LIMK2-201ENST00000331728 FBXO18Q8NFZ0 1043 aa10.06□□□□□ -0.8
LIMK2-201ENST00000331728 ZNF446Q9NWS9 450 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms