RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 ZNF215Q9UL58 517 aaPredicted RBP18.84■□□□□ 0.61
SFXN1-201ENST00000321442 SSRP1Q08945 709 aaKnown RBP18.84■□□□□ 0.61
SFXN1-201ENST00000321442 DBNDD2Q9BQY9 259 aa18.84■□□□□ 0.61
SFXN1-201ENST00000321442 PUF60Q9UHX1 559 aaKnown RBP18.84■□□□□ 0.61
SFXN1-201ENST00000321442 A0A087WWV3 80 aa18.83■□□□□ 0.61
SFXN1-201ENST00000321442 GNPATO15228 680 aa18.83■□□□□ 0.61
SFXN1-201ENST00000321442 FAM160A1Q05DH4 1040 aa18.83■□□□□ 0.61
SFXN1-201ENST00000321442 ERO1AQ96HE7 468 aa18.83■□□□□ 0.61
SFXN1-201ENST00000321442 STX17P56962 302 aa18.83■□□□□ 0.61
SFXN1-201ENST00000321442 ENOX2Q16206 610 aaKnown RBP18.83■□□□□ 0.61
SFXN1-201ENST00000321442 CEP131Q9UPN4 1083 aa18.83■□□□□ 0.61
SFXN1-201ENST00000321442 INO80Q9ULG1 1556 aaPredicted RBP18.83■□□□□ 0.6
SFXN1-201ENST00000321442 ADGRB3O60242 1522 aa18.83■□□□□ 0.6
SFXN1-201ENST00000321442 N4BP3O15049 544 aa18.83■□□□□ 0.6
SFXN1-201ENST00000321442 ATP2B3Q16720 1220 aa18.83■□□□□ 0.6
SFXN1-201ENST00000321442 TPCN1Q9ULQ1 816 aa18.83■□□□□ 0.6
SFXN1-201ENST00000321442 CLTCQ00610 1675 aaKnown RBP18.83■□□□□ 0.6
SFXN1-201ENST00000321442 ARHGEF10O15013 1369 aa18.83■□□□□ 0.6
SFXN1-201ENST00000321442 PRC1O43663 620 aa18.82■□□□□ 0.6
SFXN1-201ENST00000321442 RANBP6O60518 1105 aaKnown RBP18.82■□□□□ 0.6
SFXN1-201ENST00000321442 CDR1P51861 262 aa18.82■□□□□ 0.6
SFXN1-201ENST00000321442 ZSCAN29Q8IWY8 852 aaPredicted RBP18.82■□□□□ 0.6
SFXN1-201ENST00000321442 IBTKQ9P2D0 1353 aaPredicted RBP18.82■□□□□ 0.6
SFXN1-201ENST00000321442 SMARCC1Q92922 1105 aaPredicted RBP18.82■□□□□ 0.6
SFXN1-201ENST00000321442 MATR3P43243 847 aaKnown RBP eCLIP18.82■□□□□ 0.6
SFXN1-201ENST00000321442 ATP7BP35670 1465 aa18.81■□□□□ 0.6
SFXN1-201ENST00000321442 AATKQ6ZMQ8 1374 aa18.81■□□□□ 0.6
SFXN1-201ENST00000321442 TAF5LO75529 589 aa18.81■□□□□ 0.6
SFXN1-201ENST00000321442 CARD6Q9BX69 1037 aa18.81■□□□□ 0.6
SFXN1-201ENST00000321442 PAG1Q9NWQ8 432 aa18.81■□□□□ 0.6
SFXN1-201ENST00000321442 EVCP57679 992 aa18.81■□□□□ 0.6
SFXN1-201ENST00000321442 CUL4AQ13619 759 aa18.81■□□□□ 0.6
SFXN1-201ENST00000321442 ODF2Q5BJF6 829 aa18.81■□□□□ 0.6
SFXN1-201ENST00000321442 CAVIN4Q5BKX8 364 aa18.81■□□□□ 0.6
SFXN1-201ENST00000321442 GOLGA6L9A6NEM1 432 aa18.8■□□□□ 0.6
SFXN1-201ENST00000321442 GCKRQ14397 625 aa18.8■□□□□ 0.6
SFXN1-201ENST00000321442 SETDB2Q96T68 719 aa18.8■□□□□ 0.6
SFXN1-201ENST00000321442 METTL22Q9BUU2 404 aaPredicted RBP18.8■□□□□ 0.6
SFXN1-201ENST00000321442 TULP4Q9NRJ4 1543 aa18.8■□□□□ 0.6
SFXN1-201ENST00000321442 ZDHHC9Q9Y397 364 aa18.8■□□□□ 0.6
SFXN1-201ENST00000321442 F8W031 263 aaPredicted RBP18.8■□□□□ 0.6
SFXN1-201ENST00000321442 ERCC6LQ2NKX8 1250 aa18.8■□□□□ 0.6
SFXN1-201ENST00000321442 RSPH14Q9UHP6 348 aa18.8■□□□□ 0.6
SFXN1-201ENST00000321442 CCDC196A0A1B0GTZ2 297 aa18.79■□□□□ 0.6
SFXN1-201ENST00000321442 ZBTB43O43298 467 aa18.79■□□□□ 0.6
SFXN1-201ENST00000321442 CAPN2P17655 700 aa18.79■□□□□ 0.6
SFXN1-201ENST00000321442 GOLGA6L10A6NI86 522 aa18.79■□□□□ 0.6
SFXN1-201ENST00000321442 CYP27B1O15528 508 aa18.79■□□□□ 0.6
SFXN1-201ENST00000321442 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.79■□□□□ 0.6
SFXN1-201ENST00000321442 C10orf67Q8IYJ2 551 aa18.79■□□□□ 0.6
SFXN1-201ENST00000321442 SSH3Q8TE77 659 aa18.79■□□□□ 0.6
SFXN1-201ENST00000321442 RHOXF2BP0C7M4 288 aa18.79■□□□□ 0.6
SFXN1-201ENST00000321442 RHOXF2Q9BQY4 288 aa18.79■□□□□ 0.6
SFXN1-201ENST00000321442 KIAA1524Q8TCG1 905 aa18.79■□□□□ 0.6
SFXN1-201ENST00000321442 RPGRQ92834 1020 aaKnown RBP18.79■□□□□ 0.6
SFXN1-201ENST00000321442 ZNF622Q969S3 477 aaKnown RBP eCLIP18.79■□□□□ 0.61e-6■□□□□ 10
SFXN1-201ENST00000321442 KRT18P05783 430 aaKnown RBP18.78■□□□□ 0.6
SFXN1-201ENST00000321442 SLC5A1P13866 664 aa18.78■□□□□ 0.6
SFXN1-201ENST00000321442 MIGA1Q8NAN2 632 aa18.78■□□□□ 0.6
SFXN1-201ENST00000321442 VGLL3A8MV65 326 aa18.78■□□□□ 0.6
SFXN1-201ENST00000321442 SLC9C2Q5TAH2 1124 aa18.78■□□□□ 0.6
SFXN1-201ENST00000321442 USP21Q9UK80 565 aa18.78■□□□□ 0.6
SFXN1-201ENST00000321442 A0A0D9SFI3 127 aa18.77■□□□□ 0.6
SFXN1-201ENST00000321442 ZNF853P0CG23 659 aa18.77■□□□□ 0.6
SFXN1-201ENST00000321442 LARGE1O95461 756 aa18.77■□□□□ 0.6
SFXN1-201ENST00000321442 YEATS4O95619 227 aa18.77■□□□□ 0.6
SFXN1-201ENST00000321442 MAP3K12Q12852 859 aa18.77■□□□□ 0.6
SFXN1-201ENST00000321442 SPA17Q15506 151 aa18.77■□□□□ 0.6
SFXN1-201ENST00000321442 CCDC191Q8NCU4 936 aa18.77■□□□□ 0.6
SFXN1-201ENST00000321442 PLCD3Q8N3E9 789 aa18.77■□□□□ 0.59
SFXN1-201ENST00000321442 PLBD2Q8NHP8 589 aa18.77■□□□□ 0.59
SFXN1-201ENST00000321442 EAF2Q96CJ1 260 aaPredicted RBP18.77■□□□□ 0.59
SFXN1-201ENST00000321442 MAP9Q49MG5 647 aa18.76■□□□□ 0.59
SFXN1-201ENST00000321442 SPECC1Q5M775 1068 aa18.76■□□□□ 0.59
SFXN1-201ENST00000321442 TXLNBQ8N3L3 684 aa18.76■□□□□ 0.59
SFXN1-201ENST00000321442 SEC62Q99442 399 aaKnown RBP18.76■□□□□ 0.59
SFXN1-201ENST00000321442 JADE2Q9NQC1 790 aa18.76■□□□□ 0.59
SFXN1-201ENST00000321442 VPS18Q9P253 973 aa18.76■□□□□ 0.59
SFXN1-201ENST00000321442 DZIP1Q86YF9 867 aaKnown RBP18.76■□□□□ 0.59
SFXN1-201ENST00000321442 CTR9Q6PD62 1173 aa18.76■□□□□ 0.59
SFXN1-201ENST00000321442 SMIM5Q71RC9 77 aa18.76■□□□□ 0.59
SFXN1-201ENST00000321442 DHX58Q96C10 678 aa18.76■□□□□ 0.59
SFXN1-201ENST00000321442 XPO4Q9C0E2 1151 aaKnown RBP18.76■□□□□ 0.59
SFXN1-201ENST00000321442 OSBPL3Q9H4L5 887 aa18.76■□□□□ 0.59
SFXN1-201ENST00000321442 TFCP2L1Q9NZI6 479 aa18.76■□□□□ 0.59
SFXN1-201ENST00000321442 CAMSAP1Q5T5Y3 1602 aa18.76■□□□□ 0.59
SFXN1-201ENST00000321442 CACTINQ8WUQ7 758 aaKnown RBP18.76■□□□□ 0.59
SFXN1-201ENST00000321442 NEURL1BA8MQ27 555 aa18.75■□□□□ 0.59
SFXN1-201ENST00000321442 MYL5Q02045 173 aa18.75■□□□□ 0.59
SFXN1-201ENST00000321442 CT47A1Q5JQC4 288 aaPredicted RBP18.75■□□□□ 0.59
SFXN1-201ENST00000321442 USP28Q96RU2 1077 aa18.75■□□□□ 0.59
SFXN1-201ENST00000321442 AOX1Q06278 1338 aa18.75■□□□□ 0.59
SFXN1-201ENST00000321442 RGS12O14924 1447 aa18.75■□□□□ 0.59
SFXN1-201ENST00000321442 A0A1B0GUL7 405 aa18.75■□□□□ 0.59
SFXN1-201ENST00000321442 FANCCQ00597 558 aa18.75■□□□□ 0.59
SFXN1-201ENST00000321442 PDLIM2Q96JY6 352 aa18.75■□□□□ 0.59
SFXN1-201ENST00000321442 DRC1Q96MC2 740 aa18.75■□□□□ 0.59
SFXN1-201ENST00000321442 SRRTQ9BXP5 876 aaKnown RBP18.75■□□□□ 0.59
SFXN1-201ENST00000321442 TM6SF1Q9BZW5 370 aa18.75■□□□□ 0.59
SFXN1-201ENST00000321442 CCNL1Q9UK58 526 aaPredicted RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms