RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 WWC3Q9ULE0 1092 aa13.76□□□□□ -0.21
SYNGAP1-201ENST00000293748 SUSD4Q5VX71 490 aa13.76□□□□□ -0.21
SYNGAP1-201ENST00000293748 G2E3Q7L622 706 aa13.76□□□□□ -0.21
SYNGAP1-201ENST00000293748 CCDC24Q8N4L8 307 aa13.76□□□□□ -0.21
SYNGAP1-201ENST00000293748 TNPO1Q92973 898 aaKnown RBP13.76□□□□□ -0.21
SYNGAP1-201ENST00000293748 GRM8O00222 908 aa13.76□□□□□ -0.21
SYNGAP1-201ENST00000293748 ERFEQ4G0M1 354 aa13.76□□□□□ -0.21
SYNGAP1-201ENST00000293748 PDGFDQ9GZP0 370 aaPredicted RBP13.76□□□□□ -0.21
SYNGAP1-201ENST00000293748 CNNM1Q9NRU3 951 aa13.76□□□□□ -0.21
SYNGAP1-201ENST00000293748 EPB41L2O43491 1005 aaKnown RBP13.76□□□□□ -0.21
SYNGAP1-201ENST00000293748 PDIA6Q15084 440 aa13.76□□□□□ -0.21
SYNGAP1-201ENST00000293748 STYK1Q6J9G0 422 aa13.76□□□□□ -0.21
SYNGAP1-201ENST00000293748 TMEM57Q8N5G2 664 aa13.76□□□□□ -0.21
SYNGAP1-201ENST00000293748 CRACR2AQ9BSW2 395 aa13.76□□□□□ -0.21
SYNGAP1-201ENST00000293748 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.76□□□□□ -0.218e-7■■■■□ 22
SYNGAP1-201ENST00000293748 IBTKQ9P2D0 1353 aaPredicted RBP13.76□□□□□ -0.21
SYNGAP1-201ENST00000293748 HCLS1P14317 486 aaPredicted RBP13.75□□□□□ -0.21
SYNGAP1-201ENST00000293748 ANO10Q9NW15 660 aa13.75□□□□□ -0.21
SYNGAP1-201ENST00000293748 ATP10DQ9P241 1426 aa13.75□□□□□ -0.21
SYNGAP1-201ENST00000293748 DPEP1P16444 411 aa13.75□□□□□ -0.21
SYNGAP1-201ENST00000293748 CLCN1P35523 988 aa13.75□□□□□ -0.21
SYNGAP1-201ENST00000293748 CCDC158Q5M9N0 1113 aa13.75□□□□□ -0.21
SYNGAP1-201ENST00000293748 ISCA1Q9BUE6 129 aa13.75□□□□□ -0.21
SYNGAP1-201ENST00000293748 SLC3A2P08195 630 aaKnown RBP13.75□□□□□ -0.21
SYNGAP1-201ENST00000293748 DDR1Q08345 913 aa13.75□□□□□ -0.21
SYNGAP1-201ENST00000293748 CCDC93Q567U6 631 aa13.75□□□□□ -0.21
SYNGAP1-201ENST00000293748 PRIMPOLQ96LW4 560 aa13.75□□□□□ -0.21
SYNGAP1-201ENST00000293748 EYA3Q99504 573 aa13.75□□□□□ -0.21
SYNGAP1-201ENST00000293748 CFAP100Q494V2 611 aa13.74□□□□□ -0.21
SYNGAP1-201ENST00000293748 JDP2Q8WYK2 163 aa13.74□□□□□ -0.21
SYNGAP1-201ENST00000293748 CTNNA3Q9UI47 895 aa13.74□□□□□ -0.21
SYNGAP1-201ENST00000293748 NOL7Q9UMY1 257 aaKnown RBP13.74□□□□□ -0.21
SYNGAP1-201ENST00000293748 ADAMTS7Q9UKP4 1686 aa13.74□□□□□ -0.21
SYNGAP1-201ENST00000293748 A0A0G2JLW4 131 aa13.74□□□□□ -0.21
SYNGAP1-201ENST00000293748 NEURL1BA8MQ27 555 aa13.74□□□□□ -0.21
SYNGAP1-201ENST00000293748 BBOX1O75936 387 aa13.74□□□□□ -0.21
SYNGAP1-201ENST00000293748 GCKRQ14397 625 aa13.74□□□□□ -0.21
SYNGAP1-201ENST00000293748 SYCP1Q15431 976 aa13.74□□□□□ -0.21
SYNGAP1-201ENST00000293748 LY75O60449 1722 aa13.74□□□□□ -0.21
SYNGAP1-201ENST00000293748 CWF19L2Q2TBE0 894 aaKnown RBP13.74□□□□□ -0.21
SYNGAP1-201ENST00000293748 RTKN2Q8IZC4 609 aa13.74□□□□□ -0.21
SYNGAP1-201ENST00000293748 SH2B1Q9NRF2 756 aaPredicted RBP13.74□□□□□ -0.21
SYNGAP1-201ENST00000293748 ANKIB1Q9P2G1 1089 aa13.74□□□□□ -0.21
SYNGAP1-201ENST00000293748 DLG5Q8TDM6 1919 aa13.74□□□□□ -0.21
SYNGAP1-201ENST00000293748 MAP9Q49MG5 647 aa13.73□□□□□ -0.21
SYNGAP1-201ENST00000293748 CCDC148Q8NFR7 591 aa13.73□□□□□ -0.21
SYNGAP1-201ENST00000293748 PLCD4Q9BRC7 762 aa13.73□□□□□ -0.21
SYNGAP1-201ENST00000293748 FAM107BQ9H098 131 aa13.73□□□□□ -0.21
SYNGAP1-201ENST00000293748 INCENPQ9NQS7 918 aa13.73□□□□□ -0.21
SYNGAP1-201ENST00000293748 PRDM10Q9NQV6 1147 aa13.73□□□□□ -0.21
SYNGAP1-201ENST00000293748 KLHL40Q2TBA0 621 aa13.73□□□□□ -0.21
SYNGAP1-201ENST00000293748 NACAP1Q9BZK3 213 aa13.73□□□□□ -0.21
SYNGAP1-201ENST00000293748 BCL2L12Q9HB09 334 aa13.73□□□□□ -0.21
SYNGAP1-201ENST00000293748 LRRFIP2Q9Y608 721 aaKnown RBP13.73□□□□□ -0.21
SYNGAP1-201ENST00000293748 RREB1Q92766 1687 aa13.73□□□□□ -0.21
SYNGAP1-201ENST00000293748 NUP188Q5SRE5 1749 aa13.73□□□□□ -0.21
SYNGAP1-201ENST00000293748 SHTN1A0MZ66 631 aa13.73□□□□□ -0.21
SYNGAP1-201ENST00000293748 CTAGE5O15320 804 aa13.73□□□□□ -0.21
SYNGAP1-201ENST00000293748 TRMT2AQ8IZ69 625 aaKnown RBP13.73□□□□□ -0.21
SYNGAP1-201ENST00000293748 SRGAP3O43295 1099 aa13.72□□□□□ -0.21
SYNGAP1-201ENST00000293748 KDM4AO75164 1064 aa13.72□□□□□ -0.21
SYNGAP1-201ENST00000293748 NEFHP12036 1026 aa13.72□□□□□ -0.21
SYNGAP1-201ENST00000293748 TNNT1P13805 278 aa13.72□□□□□ -0.21
SYNGAP1-201ENST00000293748 MCM3P25205 808 aa13.72□□□□□ -0.21
SYNGAP1-201ENST00000293748 CCDC85AQ96PX6 553 aaPredicted RBP13.72□□□□□ -0.21
SYNGAP1-201ENST00000293748 UVSSAQ2YD98 709 aa13.72□□□□□ -0.21
SYNGAP1-201ENST00000293748 C6orf229H3BNL8 230 aa13.72□□□□□ -0.21
SYNGAP1-201ENST00000293748 PTGER2P43116 358 aa13.72□□□□□ -0.21
SYNGAP1-201ENST00000293748 CWC27Q6UX04 472 aaKnown RBP13.72□□□□□ -0.21
SYNGAP1-201ENST00000293748 USP25Q9UHP3 1055 aa13.72□□□□□ -0.21
SYNGAP1-201ENST00000293748 CHRNA5P30532 468 aa13.71□□□□□ -0.21
SYNGAP1-201ENST00000293748 PPEF1O14829 653 aaPredicted RBP13.71□□□□□ -0.21
SYNGAP1-201ENST00000293748 C20orf194Q5TEA3 1177 aa13.71□□□□□ -0.21
SYNGAP1-201ENST00000293748 ZSCAN25Q6NSZ9 544 aa13.71□□□□□ -0.21
SYNGAP1-201ENST00000293748 CRAMP1Q96RY5 1269 aa13.71□□□□□ -0.21
SYNGAP1-201ENST00000293748 ANKRD2Q9GZV1 360 aa13.71□□□□□ -0.21
SYNGAP1-201ENST00000293748 CDHR2Q9BYE9 1310 aa13.71□□□□□ -0.21
SYNGAP1-201ENST00000293748 URI1O94763 535 aaPredicted RBP13.71□□□□□ -0.21
SYNGAP1-201ENST00000293748 KRT18P05783 430 aaKnown RBP13.71□□□□□ -0.21
SYNGAP1-201ENST00000293748 CASTP20810 708 aaKnown RBP13.71□□□□□ -0.21
SYNGAP1-201ENST00000293748 FAM193AP78312 1265 aa13.71□□□□□ -0.21
SYNGAP1-201ENST00000293748 CENPHQ9H3R5 247 aa13.71□□□□□ -0.21
SYNGAP1-201ENST00000293748 NTSR2O95665 410 aa13.71□□□□□ -0.22
SYNGAP1-201ENST00000293748 DDX19AQ9NUU7 478 aaKnown RBP13.71□□□□□ -0.22
SYNGAP1-201ENST00000293748 CAVIN2O95810 425 aa13.7□□□□□ -0.22
SYNGAP1-201ENST00000293748 GSDMDP57764 484 aa13.7□□□□□ -0.22
SYNGAP1-201ENST00000293748 TTC39AQ5SRH9 613 aa13.7□□□□□ -0.22
SYNGAP1-201ENST00000293748 AACSQ86V21 672 aa13.7□□□□□ -0.22
SYNGAP1-201ENST00000293748 WASF1Q92558 559 aa13.7□□□□□ -0.22
SYNGAP1-201ENST00000293748 CLIP2Q9UDT6 1046 aa13.7□□□□□ -0.22
SYNGAP1-201ENST00000293748 GLRX3O76003 335 aaKnown RBP13.7□□□□□ -0.22
SYNGAP1-201ENST00000293748 CTSWP56202 376 aa13.7□□□□□ -0.22
SYNGAP1-201ENST00000293748 JAKMIP3Q5VZ66 844 aa13.7□□□□□ -0.22
SYNGAP1-201ENST00000293748 DPP8Q6V1X1 898 aaPredicted RBP13.7□□□□□ -0.22
SYNGAP1-201ENST00000293748 CCDC69A6NI79 296 aa13.7□□□□□ -0.22
SYNGAP1-201ENST00000293748 RPS8P62241 208 aaKnown RBP13.7□□□□□ -0.22
SYNGAP1-201ENST00000293748 FERMT3Q86UX7 667 aa13.7□□□□□ -0.22
SYNGAP1-201ENST00000293748 TBC1D32Q96NH3 1257 aa13.7□□□□□ -0.22
SYNGAP1-201ENST00000293748 KIF5CO60282 957 aa13.69□□□□□ -0.22
SYNGAP1-201ENST00000293748 MX1P20591 662 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms