RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 STXBP4Q6ZWJ1 553 aa18.64■□□□□ 0.57
SH3RF1-201ENST00000284637 FAM76AQ8TAV0 307 aa18.64■□□□□ 0.57
SH3RF1-201ENST00000284637 SELENOOQ9BVL4 669 aa18.64■□□□□ 0.57
SH3RF1-201ENST00000284637 SAMM50Q9Y512 469 aa18.64■□□□□ 0.57
SH3RF1-201ENST00000284637 RPGRQ92834 1020 aaKnown RBP18.64■□□□□ 0.57
SH3RF1-201ENST00000284637 PAIP2Q9BPZ3 127 aaKnown RBP18.64■□□□□ 0.57
SH3RF1-201ENST00000284637 BRAPQ7Z569 592 aa18.63■□□□□ 0.57
SH3RF1-201ENST00000284637 A0A1W2PRG0 241 aa18.63■□□□□ 0.57
SH3RF1-201ENST00000284637 TSPY3P0CV98 308 aa18.63■□□□□ 0.57
SH3RF1-201ENST00000284637 TSPY8P0CW00 308 aa18.63■□□□□ 0.57
SH3RF1-201ENST00000284637 IFT81Q8WYA0 676 aa18.63■□□□□ 0.57
SH3RF1-201ENST00000284637 HOMER2Q9NSB8 354 aa18.63■□□□□ 0.57
SH3RF1-201ENST00000284637 B4GALNT4Q76KP1 1039 aa18.63■□□□□ 0.57
SH3RF1-201ENST00000284637 ATP6V1AP38606 617 aa18.63■□□□□ 0.57
SH3RF1-201ENST00000284637 INPP5BP32019 993 aa18.62■□□□□ 0.57
SH3RF1-201ENST00000284637 TMEM63CQ9P1W3 806 aa18.62■□□□□ 0.57
SH3RF1-201ENST00000284637 LUC7L2Q9Y383 392 aaKnown RBP18.62■□□□□ 0.57
SH3RF1-201ENST00000284637 OAS2P29728 719 aaKnown RBP18.62■□□□□ 0.57
SH3RF1-201ENST00000284637 CC2D2AQ9P2K1 1620 aa18.62■□□□□ 0.57
SH3RF1-201ENST00000284637 EXOC5O00471 708 aa18.62■□□□□ 0.57
SH3RF1-201ENST00000284637 NUP160Q12769 1436 aa18.61■□□□□ 0.57
SH3RF1-201ENST00000284637 PPIP5K1Q6PFW1 1433 aa18.61■□□□□ 0.57
SH3RF1-201ENST00000284637 PLIN2Q99541 437 aa18.61■□□□□ 0.57
SH3RF1-201ENST00000284637 AFAP1L1Q8TED9 768 aa18.61■□□□□ 0.57
SH3RF1-201ENST00000284637 KRT13P13646 458 aa18.61■□□□□ 0.57
SH3RF1-201ENST00000284637 TBC1D5Q92609 795 aa18.61■□□□□ 0.57
SH3RF1-201ENST00000284637 SNX14Q9Y5W7 946 aa18.61■□□□□ 0.57
SH3RF1-201ENST00000284637 CBX8Q9HC52 389 aa18.61■□□□□ 0.57
SH3RF1-201ENST00000284637 ZNF219Q9P2Y4 722 aaPredicted RBP18.61■□□□□ 0.57
SH3RF1-201ENST00000284637 ADAMTS2O95450 1211 aa18.6■□□□□ 0.57
SH3RF1-201ENST00000284637 CCDC172P0C7W6 258 aa18.6■□□□□ 0.57
SH3RF1-201ENST00000284637 MCM7P33993 719 aa18.6■□□□□ 0.57
SH3RF1-201ENST00000284637 AKAP4Q5JQC9 854 aa18.6■□□□□ 0.57
SH3RF1-201ENST00000284637 ARFGAP2Q8N6H7 521 aa18.6■□□□□ 0.57
SH3RF1-201ENST00000284637 SERPINA10Q9UK55 444 aa18.6■□□□□ 0.57
SH3RF1-201ENST00000284637 CCT6AP40227 531 aaKnown RBP18.6■□□□□ 0.57
SH3RF1-201ENST00000284637 NAPAP54920 295 aa18.6■□□□□ 0.57
SH3RF1-201ENST00000284637 CCDC129Q6ZRS4 1044 aa18.6■□□□□ 0.57
SH3RF1-201ENST00000284637 EHMT1Q9H9B1 1298 aa18.6■□□□□ 0.57
SH3RF1-201ENST00000284637 STAMBPO95630 424 aa18.6■□□□□ 0.57
SH3RF1-201ENST00000284637 RGS22Q8NE09 1264 aa18.6■□□□□ 0.57
SH3RF1-201ENST00000284637 PHF23Q9BUL5 403 aaPredicted RBP18.6■□□□□ 0.57
SH3RF1-201ENST00000284637 RAD50Q92878 1312 aa18.6■□□□□ 0.57
SH3RF1-201ENST00000284637 GRIN2AQ12879 1464 aa18.6■□□□□ 0.57
SH3RF1-201ENST00000284637 AKR1B15C9JRZ8 316 aaPredicted RBP18.59■□□□□ 0.57
SH3RF1-201ENST00000284637 RPS6KB1P23443 525 aa18.59■□□□□ 0.57
SH3RF1-201ENST00000284637 CCDC152Q4G0S7 254 aa18.59■□□□□ 0.57
SH3RF1-201ENST00000284637 BICC1Q9H694 974 aaKnown RBP18.59■□□□□ 0.57
SH3RF1-201ENST00000284637 IKBKGQ9Y6K9 419 aa18.59■□□□□ 0.57
SH3RF1-201ENST00000284637 TTC21AQ8NDW8 1320 aa18.59■□□□□ 0.57
SH3RF1-201ENST00000284637 SMIM23A6NLE4 172 aa18.59■□□□□ 0.57
SH3RF1-201ENST00000284637 ZNF75DP51815 510 aa18.59■□□□□ 0.57
SH3RF1-201ENST00000284637 CCDC122Q5T0U0 273 aa18.59■□□□□ 0.57
SH3RF1-201ENST00000284637 MIGA1Q8NAN2 632 aa18.59■□□□□ 0.57
SH3RF1-201ENST00000284637 HELBQ8NG08 1087 aaPredicted RBP18.59■□□□□ 0.57
SH3RF1-201ENST00000284637 LRRC59Q96AG4 307 aaKnown RBP18.59■□□□□ 0.57
SH3RF1-201ENST00000284637 TLDC2A0PJX2 215 aa18.59■□□□□ 0.57
SH3RF1-201ENST00000284637 KIF4AO95239 1232 aa18.59■□□□□ 0.57
SH3RF1-201ENST00000284637 VAV2P52735 878 aa18.59■□□□□ 0.57
SH3RF1-201ENST00000284637 NAA16Q6N069 864 aaPredicted RBP18.59■□□□□ 0.57
SH3RF1-201ENST00000284637 CCDC174Q6PII3 467 aa18.59■□□□□ 0.57
SH3RF1-201ENST00000284637 SELENOSQ9BQE4 189 aa18.59■□□□□ 0.57
SH3RF1-201ENST00000284637 PLVAPQ9BX97 442 aa18.59■□□□□ 0.57
SH3RF1-201ENST00000284637 NSRP1Q9H0G5 558 aaKnown RBP18.59■□□□□ 0.57
SH3RF1-201ENST00000284637 CLSTN2Q9H4D0 955 aa18.59■□□□□ 0.57
SH3RF1-201ENST00000284637 CNGA4Q8IV77 575 aa18.58■□□□□ 0.57
SH3RF1-201ENST00000284637 ERMNQ8TAM6 284 aa18.58■□□□□ 0.57
SH3RF1-201ENST00000284637 CEP63Q96MT8 703 aa18.58■□□□□ 0.57
SH3RF1-201ENST00000284637 CARD6Q9BX69 1037 aa18.58■□□□□ 0.57
SH3RF1-201ENST00000284637 NCOA5Q9HCD5 579 aaKnown RBP18.58■□□□□ 0.57
SH3RF1-201ENST00000284637 ELP1O95163 1332 aa18.58■□□□□ 0.57
SH3RF1-201ENST00000284637 A6NNZ2 444 aa18.58■□□□□ 0.56
SH3RF1-201ENST00000284637 KRT2P35908 639 aa18.58■□□□□ 0.56
SH3RF1-201ENST00000284637 TUBB8Q3ZCM7 444 aa18.58■□□□□ 0.56
SH3RF1-201ENST00000284637 EFCC1Q9HA90 598 aa18.58■□□□□ 0.56
SH3RF1-201ENST00000284637 CLNS1AP54105 237 aaKnown RBP18.58■□□□□ 0.56
SH3RF1-201ENST00000284637 CCDC6Q16204 474 aa18.58■□□□□ 0.56
SH3RF1-201ENST00000284637 C6orf163Q5TEZ5 329 aa18.58■□□□□ 0.56
SH3RF1-201ENST00000284637 ANKS4BQ8N8V4 417 aa18.58■□□□□ 0.56
SH3RF1-201ENST00000284637 KDM5BQ9UGL1 1544 aa18.58■□□□□ 0.56
SH3RF1-201ENST00000284637 SLC27A2O14975 620 aa18.58■□□□□ 0.56
SH3RF1-201ENST00000284637 GNAQP50148 359 aa18.58■□□□□ 0.56
SH3RF1-201ENST00000284637 ZKSCAN3Q9BRR0 538 aa18.58■□□□□ 0.56
SH3RF1-201ENST00000284637 ACTN2P35609 894 aa18.57■□□□□ 0.56
SH3RF1-201ENST00000284637 CPLX4Q7Z7G2 160 aa18.57■□□□□ 0.56
SH3RF1-201ENST00000284637 IQUBQ8NA54 791 aa18.57■□□□□ 0.56
SH3RF1-201ENST00000284637 PPP1R14CQ8TAE6 165 aa18.57■□□□□ 0.56
SH3RF1-201ENST00000284637 CABP5Q9NP86 173 aa18.57■□□□□ 0.56
SH3RF1-201ENST00000284637 OTUD7BQ6GQQ9 843 aa18.57■□□□□ 0.56
SH3RF1-201ENST00000284637 NFATC2IPQ8NCF5 419 aa18.57■□□□□ 0.56
SH3RF1-201ENST00000284637 NEK11Q8NG66 645 aa18.57■□□□□ 0.56
SH3RF1-201ENST00000284637 FERMT2Q96AC1 680 aa18.57■□□□□ 0.56
SH3RF1-201ENST00000284637 RASAL2Q9UJF2 1139 aa18.57■□□□□ 0.56
SH3RF1-201ENST00000284637 FANCAO15360 1455 aa18.57■□□□□ 0.56
SH3RF1-201ENST00000284637 ATL3Q6DD88 541 aa18.57■□□□□ 0.56
SH3RF1-201ENST00000284637 IGSF22Q8N9C0 903 aa18.57■□□□□ 0.56
SH3RF1-201ENST00000284637 EYA1Q99502 592 aa18.57■□□□□ 0.56
SH3RF1-201ENST00000284637 GRIPAP1Q4V328 841 aa18.56■□□□□ 0.56
SH3RF1-201ENST00000284637 VWA3AA6NCI4 1184 aa18.56■□□□□ 0.56
SH3RF1-201ENST00000284637 HLA-DOAP06340 250 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms