RNA–Protein interactions for RNA: ENST00000268673.11

PDPK1-201, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene PDPK1, Length 4,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-201ENST00000268673 CACNA2D4Q7Z3S7 1137 aa16.87■□□□□ 0.29
PDPK1-201ENST00000268673 ZCRB1Q8TBF4 217 aaKnown RBP16.87■□□□□ 0.29
PDPK1-201ENST00000268673 BMP2KQ9NSY1 1161 aaPredicted RBP16.87■□□□□ 0.29
PDPK1-201ENST00000268673 PAG1Q9NWQ8 432 aa16.87■□□□□ 0.29
PDPK1-201ENST00000268673 RMND1Q9NWS8 449 aa16.87■□□□□ 0.29
PDPK1-201ENST00000268673 NRBP1Q9UHY1 535 aa16.87■□□□□ 0.29
PDPK1-201ENST00000268673 FGFR1OPO95684 399 aaKnown RBP16.87■□□□□ 0.29
PDPK1-201ENST00000268673 CCDC144CPQ8IYA2 1237 aa16.87■□□□□ 0.29
PDPK1-201ENST00000268673 TMOD2Q9NZR1 351 aa16.87■□□□□ 0.29
PDPK1-201ENST00000268673 SSBP05455 408 aaKnown RBP eCLIP16.87■□□□□ 0.29
PDPK1-201ENST00000268673 HOXB7P09629 217 aa16.87■□□□□ 0.29
PDPK1-201ENST00000268673 ZNF853P0CG23 659 aa16.87■□□□□ 0.29
PDPK1-201ENST00000268673 ZFYVE27Q5T4F4 411 aa16.87■□□□□ 0.29
PDPK1-201ENST00000268673 COPS6Q7L5N1 327 aa16.87■□□□□ 0.29
PDPK1-201ENST00000268673 CACTINQ8WUQ7 758 aaKnown RBP16.87■□□□□ 0.29
PDPK1-201ENST00000268673 EFCAB8A8MWE9 144 aa16.87■□□□□ 0.29
PDPK1-201ENST00000268673 DZIP1Q86YF9 867 aaKnown RBP16.87■□□□□ 0.29
PDPK1-201ENST00000268673 LSG1Q9H089 658 aaKnown RBP16.87■□□□□ 0.29
PDPK1-201ENST00000268673 VGLL3A8MV65 326 aa16.86■□□□□ 0.29
PDPK1-201ENST00000268673 DTNBO60941 627 aa16.86■□□□□ 0.29
PDPK1-201ENST00000268673 WDHD1O75717 1129 aaPredicted RBP16.86■□□□□ 0.29
PDPK1-201ENST00000268673 JAK2O60674 1132 aa16.86■□□□□ 0.29
PDPK1-201ENST00000268673 ANO1Q5XXA6 986 aa16.86■□□□□ 0.29
PDPK1-201ENST00000268673 PLCD3Q8N3E9 789 aa16.86■□□□□ 0.29
PDPK1-201ENST00000268673 XAGE3Q8WTP9 111 aa16.86■□□□□ 0.29
PDPK1-201ENST00000268673 TPCN1Q9ULQ1 816 aa16.86■□□□□ 0.29
PDPK1-201ENST00000268673 MTIF2P46199 727 aaKnown RBP16.86■□□□□ 0.29
PDPK1-201ENST00000268673 KRT83P78385 493 aa16.86■□□□□ 0.29
PDPK1-201ENST00000268673 CWF19L2Q2TBE0 894 aaKnown RBP16.86■□□□□ 0.29
PDPK1-201ENST00000268673 FAM114A1Q8IWE2 563 aa16.86■□□□□ 0.29
PDPK1-201ENST00000268673 ZDHHC9Q9Y397 364 aa16.86■□□□□ 0.29
PDPK1-201ENST00000268673 ATP8B1O43520 1251 aa16.85■□□□□ 0.29
PDPK1-201ENST00000268673 KRT86O43790 486 aa16.85■□□□□ 0.29
PDPK1-201ENST00000268673 ZNF202O95125 648 aa16.85■□□□□ 0.29
PDPK1-201ENST00000268673 USP44Q9H0E7 712 aa16.85■□□□□ 0.29
PDPK1-201ENST00000268673 ATP7AQ04656 1500 aa16.85■□□□□ 0.29
PDPK1-201ENST00000268673 RASEFQ8IZ41 740 aa16.85■□□□□ 0.29
PDPK1-201ENST00000268673 MKRN1Q9UHC7 482 aaKnown RBP16.85■□□□□ 0.29
PDPK1-201ENST00000268673 RANBP6O60518 1105 aaKnown RBP16.85■□□□□ 0.29
PDPK1-201ENST00000268673 BRD3Q15059 726 aa16.85■□□□□ 0.29
PDPK1-201ENST00000268673 AKAP4Q5JQC9 854 aa16.85■□□□□ 0.29
PDPK1-201ENST00000268673 RRAGBQ5VZM2 374 aa16.85■□□□□ 0.29
PDPK1-201ENST00000268673 PPM1EQ8WY54 764 aa16.85■□□□□ 0.29
PDPK1-201ENST00000268673 HELLSQ9NRZ9 838 aa16.85■□□□□ 0.29
PDPK1-201ENST00000268673 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.85■□□□□ 0.297e-7■■□□□ 14.3
PDPK1-201ENST00000268673 IL15P40933 162 aaPredicted RBP16.85■□□□□ 0.29
PDPK1-201ENST00000268673 AFMP43652 599 aa16.85■□□□□ 0.29
PDPK1-201ENST00000268673 PTH1RQ03431 593 aa16.85■□□□□ 0.29
PDPK1-201ENST00000268673 IQCA1Q86XH1 822 aa16.85■□□□□ 0.29
PDPK1-201ENST00000268673 KIAA1468Q9P260 1216 aa16.85■□□□□ 0.29
PDPK1-201ENST00000268673 RNF113AO15541 343 aaKnown RBP16.84■□□□□ 0.29
PDPK1-201ENST00000268673 TMEM132AQ24JP5 1023 aa16.84■□□□□ 0.29
PDPK1-201ENST00000268673 FAM76AQ8TAV0 307 aa16.84■□□□□ 0.29
PDPK1-201ENST00000268673 TRIM21P19474 475 aaKnown RBP16.84■□□□□ 0.29
PDPK1-201ENST00000268673 ATP2B3Q16720 1220 aa16.84■□□□□ 0.29
PDPK1-201ENST00000268673 ADALQ6DHV7 355 aa16.84■□□□□ 0.29
PDPK1-201ENST00000268673 CHST3Q7LGC8 479 aa16.84■□□□□ 0.29
PDPK1-201ENST00000268673 TAX1BP1Q86VP1 789 aa16.84■□□□□ 0.29
PDPK1-201ENST00000268673 KRI1Q8N9T8 703 aaKnown RBP16.84■□□□□ 0.29
PDPK1-201ENST00000268673 LRRC59Q96AG4 307 aaKnown RBP16.84■□□□□ 0.29
PDPK1-201ENST00000268673 C19orf44Q9H6X5 657 aa16.84■□□□□ 0.29
PDPK1-201ENST00000268673 TTF2Q9UNY4 1162 aaKnown RBP16.84■□□□□ 0.29
PDPK1-201ENST00000268673 NBPF7P0C2Y1 421 aaPredicted RBP16.84■□□□□ 0.29
PDPK1-201ENST00000268673 NCBP1Q09161 790 aaKnown RBP16.84■□□□□ 0.29
PDPK1-201ENST00000268673 CDC5LQ99459 802 aaKnown RBP16.84■□□□□ 0.29
PDPK1-201ENST00000268673 DDIT3P35638 169 aa16.84■□□□□ 0.29
PDPK1-201ENST00000268673 HLTFQ14527 1009 aaKnown RBP eCLIP16.84■□□□□ 0.29
PDPK1-201ENST00000268673 CABLES1Q8TDN4 633 aa16.84■□□□□ 0.29
PDPK1-201ENST00000268673 AFAP1L1Q8TED9 768 aa16.84■□□□□ 0.29
PDPK1-201ENST00000268673 NCOA3Q9Y6Q9 1424 aa16.83■□□□□ 0.29
PDPK1-201ENST00000268673 KCNA6P17658 529 aa16.83■□□□□ 0.29
PDPK1-201ENST00000268673 BICC1Q9H694 974 aaKnown RBP16.83■□□□□ 0.29
PDPK1-201ENST00000268673 DDX41Q9UJV9 622 aaKnown RBP16.83■□□□□ 0.29
PDPK1-201ENST00000268673 MAP3K19Q56UN5 1328 aa16.83■□□□□ 0.28
PDPK1-201ENST00000268673 NCKAP5LQ9HCH0 1330 aa16.83■□□□□ 0.28
PDPK1-201ENST00000268673 CCDC91Q7Z6B0 441 aa16.83■□□□□ 0.28
PDPK1-201ENST00000268673 NAPGQ99747 312 aaPredicted RBP16.83■□□□□ 0.28
PDPK1-201ENST00000268673 MATR3P43243 847 aaKnown RBP eCLIP16.83■□□□□ 0.28
PDPK1-201ENST00000268673 TDRD12Q587J7 1177 aaKnown RBP16.83■□□□□ 0.28
PDPK1-201ENST00000268673 DNAJC21Q5F1R6 531 aaKnown RBP16.83■□□□□ 0.28
PDPK1-201ENST00000268673 TMTC2Q8N394 836 aa16.82■□□□□ 0.28
PDPK1-201ENST00000268673 OTUD6BQ8N6M0 293 aa16.82■□□□□ 0.28
PDPK1-201ENST00000268673 RPGRQ92834 1020 aaKnown RBP16.82■□□□□ 0.28
PDPK1-201ENST00000268673 IFFO1Q0D2I5 559 aa16.82■□□□□ 0.28
PDPK1-201ENST00000268673 TERF2Q15554 542 aa16.82■□□□□ 0.28
PDPK1-201ENST00000268673 MFSD6Q6ZSS7 791 aa16.82■□□□□ 0.28
PDPK1-201ENST00000268673 CATIPQ7Z7H3 387 aa16.82■□□□□ 0.28
PDPK1-201ENST00000268673 UNC5CLQ8IV45 518 aa16.82■□□□□ 0.28
PDPK1-201ENST00000268673 TRIM47Q96LD4 638 aa16.82■□□□□ 0.28
PDPK1-201ENST00000268673 GUCA1BQ9UMX6 200 aa16.82■□□□□ 0.28
PDPK1-201ENST00000268673 TACC1O75410 805 aa16.82■□□□□ 0.28
PDPK1-201ENST00000268673 GCP02774 474 aa16.82■□□□□ 0.28
PDPK1-201ENST00000268673 LMBR1LQ6UX01 489 aa16.82■□□□□ 0.28
PDPK1-201ENST00000268673 MAATS1Q7Z4T9 603 aa16.82■□□□□ 0.28
PDPK1-201ENST00000268673 MLKLQ8NB16 471 aa16.82■□□□□ 0.28
PDPK1-201ENST00000268673 MPHOSPH10O00566 681 aaKnown RBP16.82■□□□□ 0.28
PDPK1-201ENST00000268673 AKR1B10O60218 316 aa16.82■□□□□ 0.28
PDPK1-201ENST00000268673 NLRP5P59047 1200 aa16.82■□□□□ 0.28
PDPK1-201ENST00000268673 ZNF444Q8N0Y2 327 aaPredicted RBP16.82■□□□□ 0.28
PDPK1-201ENST00000268673 CRACR2BQ8N4Y2 399 aaPredicted RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms