RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 TRMT1Q9NXH9 659 aaKnown RBP17.99■□□□□ 0.47
SHANK3-201ENST00000262795 KIF4AO95239 1232 aa17.99■□□□□ 0.47
SHANK3-201ENST00000262795 ITGA6P23229 1130 aa17.99■□□□□ 0.47
SHANK3-201ENST00000262795 SNX16P57768 344 aa17.99■□□□□ 0.47
SHANK3-201ENST00000262795 CCDC65Q8IXS2 484 aa17.99■□□□□ 0.47
SHANK3-201ENST00000262795 ZNF594Q96JF6 807 aaPredicted RBP17.99■□□□□ 0.47
SHANK3-201ENST00000262795 FSD2A1L4K1 749 aa17.99■□□□□ 0.47
SHANK3-201ENST00000262795 ALDH1B1P30837 517 aa17.99■□□□□ 0.47
SHANK3-201ENST00000262795 GOLGA1Q92805 767 aa17.99■□□□□ 0.47
SHANK3-201ENST00000262795 PDE6BP35913 854 aa17.98■□□□□ 0.47
SHANK3-201ENST00000262795 FNBP1Q96RU3 617 aa17.98■□□□□ 0.47
SHANK3-201ENST00000262795 CFAP58Q5T655 872 aa17.98■□□□□ 0.47
SHANK3-201ENST00000262795 KIF5CO60282 957 aa17.98■□□□□ 0.47
SHANK3-201ENST00000262795 PTGS1P23219 599 aa17.98■□□□□ 0.47
SHANK3-201ENST00000262795 UTP14CQ5TAP6 766 aaKnown RBP17.98■□□□□ 0.47
SHANK3-201ENST00000262795 TTC30BQ8N4P2 665 aa17.98■□□□□ 0.47
SHANK3-201ENST00000262795 PSMC4P43686 418 aa17.98■□□□□ 0.47
SHANK3-201ENST00000262795 CEP135Q66GS9 1140 aa17.98■□□□□ 0.47
SHANK3-201ENST00000262795 ERLIN1O75477 346 aa17.97■□□□□ 0.47
SHANK3-201ENST00000262795 C4orf50Q6ZRC1 276 aa17.97■□□□□ 0.47
SHANK3-201ENST00000262795 DNMBPQ6XZF7 1577 aa17.97■□□□□ 0.47
SHANK3-201ENST00000262795 USP48Q86UV5 1035 aa17.97■□□□□ 0.47
SHANK3-201ENST00000262795 PTPRCP08575 1304 aa17.97■□□□□ 0.47
SHANK3-201ENST00000262795 TTC6Q86TZ1 520 aa17.97■□□□□ 0.47
SHANK3-201ENST00000262795 A1BGP04217 495 aa17.97■□□□□ 0.47
SHANK3-201ENST00000262795 OTUD7BQ6GQQ9 843 aa17.97■□□□□ 0.47
SHANK3-201ENST00000262795 SPAG5Q96R06 1193 aa17.97■□□□□ 0.47
SHANK3-201ENST00000262795 TRPC6Q9Y210 931 aa17.97■□□□□ 0.47
SHANK3-201ENST00000262795 GCOM1H8Y6P7 765 aaPredicted RBP17.96■□□□□ 0.47
SHANK3-201ENST00000262795 ATP2C2O75185 946 aa17.96■□□□□ 0.47
SHANK3-201ENST00000262795 MYZAPP0CAP1 466 aa17.96■□□□□ 0.47
SHANK3-201ENST00000262795 KIAA0825Q8IV33 1275 aa17.96■□□□□ 0.47
SHANK3-201ENST00000262795 MICAL1Q8TDZ2 1067 aa17.96■□□□□ 0.47
SHANK3-201ENST00000262795 MED10Q9BTT4 135 aa17.96■□□□□ 0.47
SHANK3-201ENST00000262795 SLC5A4Q9NY91 659 aa17.96■□□□□ 0.47
SHANK3-201ENST00000262795 CLRN2A0PK11 232 aa17.96■□□□□ 0.47
SHANK3-201ENST00000262795 STRN3Q13033 797 aa17.96■□□□□ 0.47
SHANK3-201ENST00000262795 MTHFSDQ2M296 383 aaKnown RBP17.96■□□□□ 0.47
SHANK3-201ENST00000262795 FAM114A1Q8IWE2 563 aa17.96■□□□□ 0.47
SHANK3-201ENST00000262795 ARMT1Q9H993 441 aa17.96■□□□□ 0.47
SHANK3-201ENST00000262795 MAPKAPK5Q8IW41 473 aa17.96■□□□□ 0.47
SHANK3-201ENST00000262795 TGFBRAP1Q8WUH2 860 aa17.96■□□□□ 0.47
SHANK3-201ENST00000262795 DHX58Q96C10 678 aa17.96■□□□□ 0.47
SHANK3-201ENST00000262795 JADE2Q9NQC1 790 aa17.96■□□□□ 0.47
SHANK3-201ENST00000262795 PSDA5PKW4 1024 aaPredicted RBP17.96■□□□□ 0.47
SHANK3-201ENST00000262795 EIF3JO75822 258 aaKnown RBP17.96■□□□□ 0.47
SHANK3-201ENST00000262795 CFBP00751 764 aa17.96■□□□□ 0.47
SHANK3-201ENST00000262795 DPP9Q86TI2 863 aa17.96■□□□□ 0.47
SHANK3-201ENST00000262795 GLG1Q92896 1179 aa17.96■□□□□ 0.47
SHANK3-201ENST00000262795 BRF1Q92994 677 aa17.96■□□□□ 0.47
SHANK3-201ENST00000262795 LRRC27Q9C0I9 530 aa17.96■□□□□ 0.47
SHANK3-201ENST00000262795 A0A1W2PRG0 241 aa17.95■□□□□ 0.46
SHANK3-201ENST00000262795 TAOK3Q9H2K8 898 aa17.95■□□□□ 0.46
SHANK3-201ENST00000262795 MBD4O95243 580 aa17.95■□□□□ 0.46
SHANK3-201ENST00000262795 SLU7O95391 586 aaKnown RBP17.95■□□□□ 0.46
SHANK3-201ENST00000262795 TRPC3Q13507 836 aa17.95■□□□□ 0.46
SHANK3-201ENST00000262795 LETM2Q2VYF4 491 aa17.95■□□□□ 0.46
SHANK3-201ENST00000262795 ANO10Q9NW15 660 aa17.95■□□□□ 0.46
SHANK3-201ENST00000262795 ARAP1Q96P48 1450 aa17.95■□□□□ 0.46
SHANK3-201ENST00000262795 Q6ZUG5 572 aa17.95■□□□□ 0.46
SHANK3-201ENST00000262795 APOL6Q9BWW8 343 aa17.95■□□□□ 0.46
SHANK3-201ENST00000262795 CNNM2Q9H8M5 875 aa17.95■□□□□ 0.46
SHANK3-201ENST00000262795 SLC8A3P57103 927 aa17.95■□□□□ 0.46
SHANK3-201ENST00000262795 IRX5P78411 483 aaPredicted RBP17.95■□□□□ 0.46
SHANK3-201ENST00000262795 BICC1Q9H694 974 aaKnown RBP17.95■□□□□ 0.46
SHANK3-201ENST00000262795 PPP1R21Q6ZMI0 780 aa17.94■□□□□ 0.46
SHANK3-201ENST00000262795 EIF4A2Q14240 407 aaKnown RBP17.94■□□□□ 0.46
SHANK3-201ENST00000262795 NCAPH2Q6IBW4 605 aa17.94■□□□□ 0.46
SHANK3-201ENST00000262795 MLXIPQ9HAP2 919 aa17.94■□□□□ 0.46
SHANK3-201ENST00000262795 ZSCAN30Q86W11 494 aa17.94■□□□□ 0.46
SHANK3-201ENST00000262795 HOOK2Q96ED9 719 aa17.94■□□□□ 0.46
SHANK3-201ENST00000262795 DENND2AQ9ULE3 1009 aa17.94■□□□□ 0.46
SHANK3-201ENST00000262795 TSPOAP1O95153 1857 aa17.94■□□□□ 0.46
SHANK3-201ENST00000262795 PAFAH1B1P43034 410 aa17.94■□□□□ 0.46
SHANK3-201ENST00000262795 TMC6Q7Z403 805 aa17.94■□□□□ 0.46
SHANK3-201ENST00000262795 CCNT1O60563 726 aaKnown RBP17.94■□□□□ 0.46
SHANK3-201ENST00000262795 TTF2Q9UNY4 1162 aaKnown RBP17.94■□□□□ 0.46
SHANK3-201ENST00000262795 SPDYE16A6NNV3 312 aaPredicted RBP17.93■□□□□ 0.46
SHANK3-201ENST00000262795 CCDC175P0C221 793 aa17.93■□□□□ 0.46
SHANK3-201ENST00000262795 GEN1Q17RS7 908 aa17.93■□□□□ 0.46
SHANK3-201ENST00000262795 SPDYE2Q495Y8 402 aa17.93■□□□□ 0.46
SHANK3-201ENST00000262795 IRAK4Q9NWZ3 460 aa17.93■□□□□ 0.46
SHANK3-201ENST00000262795 SLFN5Q08AF3 891 aa17.93■□□□□ 0.46
SHANK3-201ENST00000262795 CLGNO14967 610 aa17.93■□□□□ 0.46
SHANK3-201ENST00000262795 USP40Q9NVE5 1235 aa17.93■□□□□ 0.46
SHANK3-201ENST00000262795 TESPA1A2RU30 521 aaPredicted RBP17.93■□□□□ 0.46
SHANK3-201ENST00000262795 URI1O94763 535 aaPredicted RBP17.93■□□□□ 0.46
SHANK3-201ENST00000262795 KRT2P35908 639 aa17.93■□□□□ 0.46
SHANK3-201ENST00000262795 IL15P40933 162 aaPredicted RBP17.93■□□□□ 0.46
SHANK3-201ENST00000262795 GNAQP50148 359 aa17.93■□□□□ 0.46
SHANK3-201ENST00000262795 KRT79Q5XKE5 535 aa17.93■□□□□ 0.46
SHANK3-201ENST00000262795 DCAF5Q96JK2 942 aa17.93■□□□□ 0.46
SHANK3-201ENST00000262795 CRACR2AQ9BSW2 395 aa17.93■□□□□ 0.46
SHANK3-201ENST00000262795 IFT74Q96LB3 600 aa17.93■□□□□ 0.46
SHANK3-201ENST00000262795 TRPC5Q9UL62 973 aaPredicted RBP17.93■□□□□ 0.46
SHANK3-201ENST00000262795 GTF2F1P35269 517 aaKnown RBP eCLIP17.93■□□□□ 0.461e-6■■■■□ 23.3
SHANK3-201ENST00000262795 JAKMIP2Q96AA8 810 aa17.93■□□□□ 0.46
SHANK3-201ENST00000262795 ZBED2Q9BTP6 218 aa17.93■□□□□ 0.46
SHANK3-201ENST00000262795 RNF216Q9NWF9 866 aaPredicted RBP17.93■□□□□ 0.46
SHANK3-201ENST00000262795 KIAA0586Q9BVV6 1533 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms