RNA–Protein interactions for RNA: ENST00000262215.7

ARFGEF1-201, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGEF1, Length 7,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-201ENST00000262215 PYM1Q9BRP8 204 aaKnown RBP14.03□□□□□ -0.16
ARFGEF1-201ENST00000262215 C6orf50Q9HD87 102 aa14.03□□□□□ -0.16
ARFGEF1-201ENST00000262215 NKIRAS1Q9NYS0 192 aa14.03□□□□□ -0.16
ARFGEF1-201ENST00000262215 ALDH3A1P30838 453 aa14.03□□□□□ -0.16
ARFGEF1-201ENST00000262215 NCBP1Q09161 790 aaKnown RBP14.03□□□□□ -0.16
ARFGEF1-201ENST00000262215 CCDC14Q49A88 953 aa14.03□□□□□ -0.16
ARFGEF1-201ENST00000262215 MAEAQ7L5Y9 396 aa14.03□□□□□ -0.16
ARFGEF1-201ENST00000262215 CCDC110Q8TBZ0 833 aa14.03□□□□□ -0.16
ARFGEF1-201ENST00000262215 CPSF2Q9P2I0 782 aaKnown RBP14.03□□□□□ -0.16
ARFGEF1-201ENST00000262215 ZKSCAN5Q9Y2L8 839 aa14.03□□□□□ -0.16
ARFGEF1-201ENST00000262215 BACH1O14867 736 aa14.03□□□□□ -0.16
ARFGEF1-201ENST00000262215 PI4KAP2A4QPH2 592 aa14.02□□□□□ -0.16
ARFGEF1-201ENST00000262215 KRT83P78385 493 aa14.02□□□□□ -0.16
ARFGEF1-201ENST00000262215 PI4KAP1Q8N8J0 262 aa14.02□□□□□ -0.16
ARFGEF1-201ENST00000262215 ACSBG1Q96GR2 724 aa14.02□□□□□ -0.16
ARFGEF1-201ENST00000262215 BIN2Q9UBW5 565 aaPredicted RBP14.02□□□□□ -0.16
ARFGEF1-201ENST00000262215 BUB1BO60566 1050 aaPredicted RBP14.02□□□□□ -0.16
ARFGEF1-201ENST00000262215 VAV2P52735 878 aa14.02□□□□□ -0.16
ARFGEF1-201ENST00000262215 BIRC3Q13489 604 aa14.02□□□□□ -0.16
ARFGEF1-201ENST00000262215 CUL4BQ13620 913 aa14.02□□□□□ -0.16
ARFGEF1-201ENST00000262215 PSMB7Q99436 277 aa14.02□□□□□ -0.16
ARFGEF1-201ENST00000262215 FAM204AQ9H8W3 233 aa14.02□□□□□ -0.16
ARFGEF1-201ENST00000262215 FOXO3O43524 673 aa14.02□□□□□ -0.17
ARFGEF1-201ENST00000262215 CLUL1Q15846 466 aa14.02□□□□□ -0.17
ARFGEF1-201ENST00000262215 MIGA1Q8NAN2 632 aa14.02□□□□□ -0.17
ARFGEF1-201ENST00000262215 GSDMBQ8TAX9 411 aa14.02□□□□□ -0.17
ARFGEF1-201ENST00000262215 MAPK8IP1Q9UQF2 711 aa14.02□□□□□ -0.17
ARFGEF1-201ENST00000262215 SCAPERQ9BY12 1400 aa14.02□□□□□ -0.17
ARFGEF1-201ENST00000262215 IGHDP01880 384 aa14.02□□□□□ -0.17
ARFGEF1-201ENST00000262215 MAN1A1P33908 653 aa14.02□□□□□ -0.17
ARFGEF1-201ENST00000262215 BIRC2Q13490 618 aa14.02□□□□□ -0.17
ARFGEF1-201ENST00000262215 CCDC117Q8IWD4 279 aaPredicted RBP14.02□□□□□ -0.17
ARFGEF1-201ENST00000262215 RTL1A6NKG5 1358 aa14.02□□□□□ -0.17
ARFGEF1-201ENST00000262215 CHMP2AO43633 222 aa14.01□□□□□ -0.17
ARFGEF1-201ENST00000262215 CLNS1AP54105 237 aaKnown RBP14.01□□□□□ -0.17
ARFGEF1-201ENST00000262215 ANKLE2Q86XL3 938 aa14.01□□□□□ -0.17
ARFGEF1-201ENST00000262215 DAPK3O43293 454 aa14.01□□□□□ -0.17
ARFGEF1-201ENST00000262215 GAS8O95995 478 aa14.01□□□□□ -0.17
ARFGEF1-201ENST00000262215 TRIM27P14373 513 aa14.01□□□□□ -0.17
ARFGEF1-201ENST00000262215 UVSSAQ2YD98 709 aa14.01□□□□□ -0.17
ARFGEF1-201ENST00000262215 ZKSCAN3Q9BRR0 538 aa14.01□□□□□ -0.17
ARFGEF1-201ENST00000262215 ZSCAN16Q9H4T2 348 aaPredicted RBP14.01□□□□□ -0.17
ARFGEF1-201ENST00000262215 NBPF6Q5VWK0 638 aa14.01□□□□□ -0.17
ARFGEF1-201ENST00000262215 NBPF5PQ86XG9 351 aaPredicted RBP14.01□□□□□ -0.17
ARFGEF1-201ENST00000262215 NBPF4Q96M43 638 aa14.01□□□□□ -0.17
ARFGEF1-201ENST00000262215 SPDYE3A6NKU9 549 aa14.01□□□□□ -0.17
ARFGEF1-201ENST00000262215 SPOPO43791 374 aa14.01□□□□□ -0.17
ARFGEF1-201ENST00000262215 SEL1L2Q5TEA6 688 aa14.01□□□□□ -0.17
ARFGEF1-201ENST00000262215 SMAP1Q8IYB5 467 aaPredicted RBP14.01□□□□□ -0.17
ARFGEF1-201ENST00000262215 TACO1Q9BSH4 297 aaKnown RBP14□□□□□ -0.17
ARFGEF1-201ENST00000262215 WDR97A6NE52 1622 aa14□□□□□ -0.17
ARFGEF1-201ENST00000262215 RIMBP2O15034 1052 aa14□□□□□ -0.17
ARFGEF1-201ENST00000262215 PRIM1P49642 420 aaKnown RBP14□□□□□ -0.17
ARFGEF1-201ENST00000262215 TBC1D32Q96NH3 1257 aa14□□□□□ -0.17
ARFGEF1-201ENST00000262215 DBF4Q9UBU7 674 aaPredicted RBP14□□□□□ -0.17
ARFGEF1-201ENST00000262215 USTQ9Y2C2 406 aa14□□□□□ -0.17
ARFGEF1-201ENST00000262215 RABGAP1Q9Y3P9 1069 aa14□□□□□ -0.17
ARFGEF1-201ENST00000262215 VCX3BQ9H321 246 aa14□□□□□ -0.17
ARFGEF1-201ENST00000262215 SH2D4BQ5SQS7 431 aa14□□□□□ -0.17
ARFGEF1-201ENST00000262215 KCNG4Q8TDN1 519 aa14□□□□□ -0.17
ARFGEF1-201ENST00000262215 KRT79Q5XKE5 535 aa14□□□□□ -0.17
ARFGEF1-201ENST00000262215 RSPH3Q86UC2 560 aa13.99□□□□□ -0.17
ARFGEF1-201ENST00000262215 PNMA8AQ86V59 439 aaPredicted RBP13.99□□□□□ -0.17
ARFGEF1-201ENST00000262215 MGARPQ8TDB4 240 aa13.99□□□□□ -0.17
ARFGEF1-201ENST00000262215 EXOC5O00471 708 aa13.99□□□□□ -0.17
ARFGEF1-201ENST00000262215 FNBP4Q8N3X1 1017 aaPredicted RBP13.99□□□□□ -0.17
ARFGEF1-201ENST00000262215 RBM8AQ9Y5S9 174 aaKnown RBP13.99□□□□□ -0.17
ARFGEF1-201ENST00000262215 ESR2Q92731 530 aa13.99□□□□□ -0.17
ARFGEF1-201ENST00000262215 ERBINQ96RT1 1412 aa13.99□□□□□ -0.17
ARFGEF1-201ENST00000262215 ZNF853P0CG23 659 aa13.99□□□□□ -0.17
ARFGEF1-201ENST00000262215 BSPRYQ5W0U4 402 aa13.99□□□□□ -0.17
ARFGEF1-201ENST00000262215 CASC4Q6P4E1 433 aa13.99□□□□□ -0.17
ARFGEF1-201ENST00000262215 HS2ST1Q7LGA3 356 aa13.99□□□□□ -0.17
ARFGEF1-201ENST00000262215 MCUR1Q96AQ8 359 aa13.99□□□□□ -0.17
ARFGEF1-201ENST00000262215 TBC1D31Q96DN5 1066 aa13.99□□□□□ -0.17
ARFGEF1-201ENST00000262215 PPP2R3AQ06190 1150 aa13.99□□□□□ -0.17
ARFGEF1-201ENST00000262215 APOBRQ0VD83 1088 aa13.99□□□□□ -0.17
ARFGEF1-201ENST00000262215 CACNA2D3Q8IZS8 1091 aa13.99□□□□□ -0.17
ARFGEF1-201ENST00000262215 FAM200AQ8TCP9 573 aa13.99□□□□□ -0.17
ARFGEF1-201ENST00000262215 MTUS1Q9ULD2 1270 aa13.99□□□□□ -0.17
ARFGEF1-201ENST00000262215 ARHGAP5Q13017 1502 aa13.99□□□□□ -0.17
ARFGEF1-201ENST00000262215 ITIH3Q06033 890 aa13.99□□□□□ -0.17
ARFGEF1-201ENST00000262215 HELBQ8NG08 1087 aaPredicted RBP13.99□□□□□ -0.17
ARFGEF1-201ENST00000262215 ANKFY1Q9P2R3 1169 aa13.99□□□□□ -0.17
ARFGEF1-201ENST00000262215 CTNND2Q9UQB3 1225 aa13.99□□□□□ -0.17
ARFGEF1-201ENST00000262215 BANK1Q8NDB2 785 aa13.98□□□□□ -0.17
ARFGEF1-201ENST00000262215 STK38LQ9Y2H1 464 aa13.98□□□□□ -0.17
ARFGEF1-201ENST00000262215 LUC7L2Q9Y383 392 aaKnown RBP13.98□□□□□ -0.17
ARFGEF1-201ENST00000262215 DTNBO60941 627 aa13.98□□□□□ -0.17
ARFGEF1-201ENST00000262215 TYRO3Q06418 890 aa13.98□□□□□ -0.17
ARFGEF1-201ENST00000262215 SLC9C2Q5TAH2 1124 aa13.98□□□□□ -0.17
ARFGEF1-201ENST00000262215 FGD6Q6ZV73 1430 aa13.98□□□□□ -0.17
ARFGEF1-201ENST00000262215 STAC3Q96MF2 364 aa13.98□□□□□ -0.17
ARFGEF1-201ENST00000262215 KRT23Q9C075 422 aa13.98□□□□□ -0.17
ARFGEF1-201ENST00000262215 VPS16Q9H269 839 aa13.98□□□□□ -0.17
ARFGEF1-201ENST00000262215 FBLN1P23142 703 aa13.98□□□□□ -0.17
ARFGEF1-201ENST00000262215 TTC22Q5TAA0 569 aa13.98□□□□□ -0.17
ARFGEF1-201ENST00000262215 SPTLC2O15270 562 aa13.98□□□□□ -0.17
ARFGEF1-201ENST00000262215 TNNC1P63316 161 aa13.98□□□□□ -0.17
ARFGEF1-201ENST00000262215 PRR16Q569H4 304 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms