RNA–Protein interactions for RNA: ENST00000246868.6

SBDS-201, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SBDS, Length 1,631 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-201ENST00000246868 BCS1LQ9Y276 419 aa23.22■■□□□ 1.31
SBDS-201ENST00000246868 CYP2E1P05181 493 aaPredicted RBP23.22■■□□□ 1.31
SBDS-201ENST00000246868 TDRD7Q8NHU6 1098 aaKnown RBP23.22■■□□□ 1.31
SBDS-201ENST00000246868 PSMD1Q99460 953 aa23.22■■□□□ 1.31
SBDS-201ENST00000246868 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.22■■□□□ 1.31
SBDS-201ENST00000246868 COA1Q9GZY4 146 aa23.22■■□□□ 1.31
SBDS-201ENST00000246868 ANTXR1Q9H6X2 564 aa23.22■■□□□ 1.31
SBDS-201ENST00000246868 CD209Q9NNX6 404 aa23.22■■□□□ 1.31
SBDS-201ENST00000246868 SNED1Q8TER0 1413 aa23.21■■□□□ 1.31
SBDS-201ENST00000246868 RUFY2Q8WXA3 655 aa23.21■■□□□ 1.31
SBDS-201ENST00000246868 IL1R1P14778 569 aa23.2■■□□□ 1.3
SBDS-201ENST00000246868 CHAF1AQ13111 956 aaPredicted RBP23.19■■□□□ 1.3
SBDS-201ENST00000246868 ZSCAN25Q6NSZ9 544 aa23.19■■□□□ 1.3
SBDS-201ENST00000246868 IDH1O75874 414 aaKnown RBP23.19■■□□□ 1.3
SBDS-201ENST00000246868 ZFYP08048 801 aaPredicted RBP23.19■■□□□ 1.3
SBDS-201ENST00000246868 UPF2Q9HAU5 1272 aaKnown RBP23.19■■□□□ 1.3
SBDS-201ENST00000246868 MAP3K12Q12852 859 aa23.18■■□□□ 1.3
SBDS-201ENST00000246868 ZGPATQ8N5A5 531 aaKnown RBP23.18■■□□□ 1.3
SBDS-201ENST00000246868 WDR66Q8TBY9 1149 aa23.18■■□□□ 1.3
SBDS-201ENST00000246868 PIH1D3Q9NQM4 214 aaKnown RBP23.18■■□□□ 1.3
SBDS-201ENST00000246868 LRP2BPQ9P2M1 347 aa23.18■■□□□ 1.3
SBDS-201ENST00000246868 COL1A1P02452 1464 aaPredicted RBP23.18■■□□□ 1.3
SBDS-201ENST00000246868 KIAA2012Q0VF49 1180 aa23.17■■□□□ 1.3
SBDS-201ENST00000246868 CWC27Q6UX04 472 aaKnown RBP23.17■■□□□ 1.3
SBDS-201ENST00000246868 ESYT1Q9BSJ8 1104 aa23.17■■□□□ 1.3
SBDS-201ENST00000246868 VPS33BQ9H267 617 aa23.17■■□□□ 1.3
SBDS-201ENST00000246868 ABCF2Q9UG63 623 aa23.17■■□□□ 1.3
SBDS-201ENST00000246868 MYH7P12883 1935 aa23.17■■□□□ 1.3
SBDS-201ENST00000246868 RNF113AO15541 343 aaKnown RBP23.16■■□□□ 1.3
SBDS-201ENST00000246868 PPIP5K2O43314 1243 aa23.16■■□□□ 1.3
SBDS-201ENST00000246868 DOK7Q18PE1 504 aa23.16■■□□□ 1.3
SBDS-201ENST00000246868 SYT17Q9BSW7 474 aa23.16■■□□□ 1.3
SBDS-201ENST00000246868 ARFGEF1Q9Y6D6 1849 aa23.16■■□□□ 1.3
SBDS-201ENST00000246868 REC8O95072 547 aa23.15■■□□□ 1.3
SBDS-201ENST00000246868 MFAP1P55081 439 aaKnown RBP23.15■■□□□ 1.3
SBDS-201ENST00000246868 AOC3Q16853 763 aa23.15■■□□□ 1.3
SBDS-201ENST00000246868 SPTY2D1Q68D10 685 aaPredicted RBP23.15■■□□□ 1.3
SBDS-201ENST00000246868 PODNQ7Z5L7 613 aa23.15■■□□□ 1.3
SBDS-201ENST00000246868 TAOK3Q9H2K8 898 aa23.15■■□□□ 1.3
SBDS-201ENST00000246868 NMIQ13287 307 aaPredicted RBP23.15■■□□□ 1.3
SBDS-201ENST00000246868 SLC9C2Q5TAH2 1124 aa23.15■■□□□ 1.3
SBDS-201ENST00000246868 GOLGB1Q14789 3259 aaKnown RBP23.14■■□□□ 1.3
SBDS-201ENST00000246868 DOCK2Q92608 1830 aa23.14■■□□□ 1.3
SBDS-201ENST00000246868 RAD50Q92878 1312 aa23.14■■□□□ 1.3
SBDS-201ENST00000246868 SALL1Q9NSC2 1324 aa23.14■■□□□ 1.3
SBDS-201ENST00000246868 TBC1D22AQ8WUA7 517 aa23.14■■□□□ 1.29
SBDS-201ENST00000246868 FER1L6Q2WGJ9 1857 aa23.13■■□□□ 1.29
SBDS-201ENST00000246868 IGSF3O75054 1194 aa23.13■■□□□ 1.29
SBDS-201ENST00000246868 SEC24BO95487 1268 aa23.13■■□□□ 1.29
SBDS-201ENST00000246868 ERICH6Q7L0X2 663 aa23.13■■□□□ 1.29
SBDS-201ENST00000246868 FAM227BQ96M60 508 aa23.13■■□□□ 1.29
SBDS-201ENST00000246868 DBNDD1Q9H9R9 158 aa23.13■■□□□ 1.29
SBDS-201ENST00000246868 ZNF277Q9NRM2 450 aaPredicted RBP23.13■■□□□ 1.29
SBDS-201ENST00000246868 RAI14Q9P0K7 980 aa23.13■■□□□ 1.29
SBDS-201ENST00000246868 MYO5AQ9Y4I1 1855 aaKnown RBP23.13■■□□□ 1.29
SBDS-201ENST00000246868 SGSM2O43147 1006 aa23.12■■□□□ 1.29
SBDS-201ENST00000246868 ECE2O60344 883 aa23.12■■□□□ 1.29
SBDS-201ENST00000246868 LARGE2Q8N3Y3 721 aa23.12■■□□□ 1.29
SBDS-201ENST00000246868 HELLSQ9NRZ9 838 aa23.12■■□□□ 1.29
SBDS-201ENST00000246868 JAG2Q9Y219 1238 aa23.12■■□□□ 1.29
SBDS-201ENST00000246868 FAM205AQ6ZU69 1335 aa23.12■■□□□ 1.29
SBDS-201ENST00000246868 A0A0D9SFI3 127 aa23.11■■□□□ 1.29
SBDS-201ENST00000246868 PDE6AP16499 860 aa23.11■■□□□ 1.29
SBDS-201ENST00000246868 ADD2P35612 726 aa23.11■■□□□ 1.29
SBDS-201ENST00000246868 UBE3CQ15386 1083 aa23.11■■□□□ 1.29
SBDS-201ENST00000246868 KIAA1211Q6ZU35 1233 aa23.11■■□□□ 1.29
SBDS-201ENST00000246868 FBXW7Q969H0 707 aa23.11■■□□□ 1.29
SBDS-201ENST00000246868 GTF2IP78347 998 aa23.11■■□□□ 1.29
SBDS-201ENST00000246868 MCMDC2Q4G0Z9 681 aa23.11■■□□□ 1.29
SBDS-201ENST00000246868 ZMYM1Q5SVZ6 1142 aa23.11■■□□□ 1.29
SBDS-201ENST00000246868 TMED8Q6PL24 325 aaPredicted RBP23.11■■□□□ 1.29
SBDS-201ENST00000246868 APPBP2Q92624 585 aa23.11■■□□□ 1.29
SBDS-201ENST00000246868 CHD4Q14839 1912 aa23.1■■□□□ 1.29
SBDS-201ENST00000246868 LDHBP07195 334 aaKnown RBP23.1■■□□□ 1.29
SBDS-201ENST00000246868 IARSP41252 1262 aaKnown RBP23.1■■□□□ 1.29
SBDS-201ENST00000246868 TTLL5Q6EMB2 1281 aa23.1■■□□□ 1.29
SBDS-201ENST00000246868 MAGEB6Q8N7X4 407 aa23.1■■□□□ 1.29
SBDS-201ENST00000246868 LTBP3Q9NS15 1303 aa23.1■■□□□ 1.29
SBDS-201ENST00000246868 CCDC88AQ3V6T2 1871 aa23.09■■□□□ 1.29
SBDS-201ENST00000246868 MFSD14BQ5SR56 506 aa23.09■■□□□ 1.29
SBDS-201ENST00000246868 ANO2Q9NQ90 1003 aa23.09■■□□□ 1.29
SBDS-201ENST00000246868 ZNF532Q9HCE3 1301 aa23.09■■□□□ 1.29
SBDS-201ENST00000246868 NFKBIEO00221 500 aa23.08■■□□□ 1.29
SBDS-201ENST00000246868 DZIP1Q86YF9 867 aaKnown RBP23.08■■□□□ 1.29
SBDS-201ENST00000246868 NIM1KQ8IY84 436 aa23.08■■□□□ 1.29
SBDS-201ENST00000246868 CHGBP05060 677 aa23.08■■□□□ 1.28
SBDS-201ENST00000246868 PRDX5P30044 214 aa23.08■■□□□ 1.28
SBDS-201ENST00000246868 STRIP1Q5VSL9 837 aa23.07■■□□□ 1.28
SBDS-201ENST00000246868 NAA16Q6N069 864 aaPredicted RBP23.07■■□□□ 1.28
SBDS-201ENST00000246868 JDP2Q8WYK2 163 aa23.07■■□□□ 1.28
SBDS-201ENST00000246868 SUGT1Q9Y2Z0 365 aa23.07■■□□□ 1.28
SBDS-201ENST00000246868 TCRBV5S4A2TA0A5A2 114 aa23.06■■□□□ 1.28
SBDS-201ENST00000246868 USP17L3A6NCW0 530 aa23.06■■□□□ 1.28
SBDS-201ENST00000246868 USP17L4A6NCW7 530 aa23.06■■□□□ 1.28
SBDS-201ENST00000246868 CYP7A1P22680 504 aa23.06■■□□□ 1.28
SBDS-201ENST00000246868 SLFNL1Q499Z3 407 aa23.06■■□□□ 1.28
SBDS-201ENST00000246868 USP17L1Q7RTZ2 530 aa23.06■■□□□ 1.28
SBDS-201ENST00000246868 OSBP2Q969R2 916 aa23.06■■□□□ 1.28
SBDS-201ENST00000246868 IL25Q9H293 177 aa23.06■■□□□ 1.28
SBDS-201ENST00000246868 TSHZ2Q9NRE2 1034 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms