RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 TSPY8P0CW00 308 aa19.58■□□□□ 0.72
SLC1A4-201ENST00000234256 USP8P40818 1118 aa19.58■□□□□ 0.72
SLC1A4-201ENST00000234256 ME3Q16798 604 aa19.58■□□□□ 0.72
SLC1A4-201ENST00000234256 MAP9Q49MG5 647 aa19.58■□□□□ 0.72
SLC1A4-201ENST00000234256 UTP14AQ9BVJ6 771 aaKnown RBP19.58■□□□□ 0.72
SLC1A4-201ENST00000234256 FAM160A1Q05DH4 1040 aa19.57■□□□□ 0.72
SLC1A4-201ENST00000234256 LTKP29376 864 aa19.57■□□□□ 0.72
SLC1A4-201ENST00000234256 CNKSR2Q8WXI2 1034 aa19.57■□□□□ 0.72
SLC1A4-201ENST00000234256 SMARCC1Q92922 1105 aaPredicted RBP19.57■□□□□ 0.72
SLC1A4-201ENST00000234256 BCCIPQ9P287 314 aaKnown RBP eCLIP19.57■□□□□ 0.72
SLC1A4-201ENST00000234256 PRPF4BQ13523 1007 aaKnown RBP19.57■□□□□ 0.72
SLC1A4-201ENST00000234256 KBTBD3Q8NAB2 608 aa19.57■□□□□ 0.72
SLC1A4-201ENST00000234256 SSH3Q8TE77 659 aa19.57■□□□□ 0.72
SLC1A4-201ENST00000234256 MCM9Q9NXL9 1143 aa19.57■□□□□ 0.72
SLC1A4-201ENST00000234256 ANKRD62A6NC57 917 aa19.56■□□□□ 0.72
SLC1A4-201ENST00000234256 RFC4P35249 363 aa19.56■□□□□ 0.72
SLC1A4-201ENST00000234256 AMPD3Q01432 767 aa19.56■□□□□ 0.72
SLC1A4-201ENST00000234256 CABP5Q9NP86 173 aa19.56■□□□□ 0.72
SLC1A4-201ENST00000234256 FGFR1OPO95684 399 aaKnown RBP19.56■□□□□ 0.72
SLC1A4-201ENST00000234256 KRT222Q8N1A0 295 aa19.56■□□□□ 0.72
SLC1A4-201ENST00000234256 CBX8Q9HC52 389 aa19.56■□□□□ 0.72
SLC1A4-201ENST00000234256 ARFGAP3Q9NP61 516 aa19.56■□□□□ 0.72
SLC1A4-201ENST00000234256 VPS36Q86VN1 386 aa19.56■□□□□ 0.72
SLC1A4-201ENST00000234256 MAGEB6P1A0A0J9YX57 407 aa19.55■□□□□ 0.72
SLC1A4-201ENST00000234256 GPAA1O43292 621 aa19.55■□□□□ 0.72
SLC1A4-201ENST00000234256 ASIC1P78348 528 aa19.55■□□□□ 0.72
SLC1A4-201ENST00000234256 PLBD2Q8NHP8 589 aa19.55■□□□□ 0.72
SLC1A4-201ENST00000234256 PHKBQ93100 1093 aa19.55■□□□□ 0.72
SLC1A4-201ENST00000234256 SETDB2Q96T68 719 aa19.55■□□□□ 0.72
SLC1A4-201ENST00000234256 MCM7P33993 719 aa19.55■□□□□ 0.72
SLC1A4-201ENST00000234256 XAGE2Q96GT9 111 aa19.55■□□□□ 0.72
SLC1A4-201ENST00000234256 EXOC1Q9NV70 894 aa19.55■□□□□ 0.72
SLC1A4-201ENST00000234256 NSFL1CQ9UNZ2 370 aaKnown RBP19.55■□□□□ 0.72
SLC1A4-201ENST00000234256 A0A0D9SFI3 127 aa19.55■□□□□ 0.72
SLC1A4-201ENST00000234256 RASEFQ8IZ41 740 aa19.55■□□□□ 0.72
SLC1A4-201ENST00000234256 MMRN2Q9H8L6 949 aa19.55■□□□□ 0.72
SLC1A4-201ENST00000234256 HOXB7P09629 217 aa19.54■□□□□ 0.72
SLC1A4-201ENST00000234256 SEPT7Q16181 437 aaKnown RBP19.54■□□□□ 0.72
SLC1A4-201ENST00000234256 DDB1Q16531 1140 aa19.54■□□□□ 0.72
SLC1A4-201ENST00000234256 PLEKHG3A1L390 1219 aa19.54■□□□□ 0.72
SLC1A4-201ENST00000234256 ITGA6P23229 1130 aa19.54■□□□□ 0.72
SLC1A4-201ENST00000234256 BRAPQ7Z569 592 aa19.54■□□□□ 0.72
SLC1A4-201ENST00000234256 AEBP2Q6ZN18 517 aaPredicted RBP19.54■□□□□ 0.72
SLC1A4-201ENST00000234256 ATP7AQ04656 1500 aa19.54■□□□□ 0.72
SLC1A4-201ENST00000234256 ARID5AQ03989 594 aa19.54■□□□□ 0.72
SLC1A4-201ENST00000234256 PICALMQ13492 652 aa19.54■□□□□ 0.72
SLC1A4-201ENST00000234256 SIRT2Q8IXJ6 389 aa19.54■□□□□ 0.72
SLC1A4-201ENST00000234256 MAPK8IP1Q9UQF2 711 aa19.54■□□□□ 0.72
SLC1A4-201ENST00000234256 TAF5LO75529 589 aa19.53■□□□□ 0.72
SLC1A4-201ENST00000234256 PUF60Q9UHX1 559 aaKnown RBP19.53■□□□□ 0.72
SLC1A4-201ENST00000234256 PLCD4Q9BRC7 762 aa19.53■□□□□ 0.72
SLC1A4-201ENST00000234256 FAM107BQ9H098 131 aa19.53■□□□□ 0.72
SLC1A4-201ENST00000234256 VWA3AA6NCI4 1184 aa19.53■□□□□ 0.72
SLC1A4-201ENST00000234256 PSMA7O14818 248 aa19.53■□□□□ 0.72
SLC1A4-201ENST00000234256 PHACTR2O75167 634 aa19.53■□□□□ 0.72
SLC1A4-201ENST00000234256 GIGYF1O75420 1035 aaPredicted RBP19.53■□□□□ 0.72
SLC1A4-201ENST00000234256 ZNF174Q15697 407 aa19.53■□□□□ 0.72
SLC1A4-201ENST00000234256 ARMT1Q9H993 441 aa19.53■□□□□ 0.72
SLC1A4-201ENST00000234256 HELLSQ9NRZ9 838 aa19.53■□□□□ 0.72
SLC1A4-201ENST00000234256 NAPAP54920 295 aa19.52■□□□□ 0.72
SLC1A4-201ENST00000234256 GOPCQ9HD26 462 aa19.52■□□□□ 0.72
SLC1A4-201ENST00000234256 hCG_1642624A0A1W2PR95 340 aa19.52■□□□□ 0.72
SLC1A4-201ENST00000234256 DNAJC10Q8IXB1 793 aa19.52■□□□□ 0.72
SLC1A4-201ENST00000234256 KRI1Q8N9T8 703 aaKnown RBP19.52■□□□□ 0.72
SLC1A4-201ENST00000234256 MYL5Q02045 173 aa19.52■□□□□ 0.72
SLC1A4-201ENST00000234256 SPAG5Q96R06 1193 aa19.52■□□□□ 0.72
SLC1A4-201ENST00000234256 ANO1Q5XXA6 986 aa19.52■□□□□ 0.71
SLC1A4-201ENST00000234256 IFFO1Q0D2I5 559 aa19.51■□□□□ 0.71
SLC1A4-201ENST00000234256 GPT2Q8TD30 523 aa19.51■□□□□ 0.71
SLC1A4-201ENST00000234256 APPBP2Q92624 585 aa19.51■□□□□ 0.71
SLC1A4-201ENST00000234256 SLC52A2Q9HAB3 445 aa19.51■□□□□ 0.71
SLC1A4-201ENST00000234256 TRPM2O94759 1503 aa19.51■□□□□ 0.71
SLC1A4-201ENST00000234256 BMP15O95972 392 aa19.51■□□□□ 0.71
SLC1A4-201ENST00000234256 CCDC175P0C221 793 aa19.51■□□□□ 0.71
SLC1A4-201ENST00000234256 ZAP70P43403 619 aa19.51■□□□□ 0.71
SLC1A4-201ENST00000234256 CTR9Q6PD62 1173 aa19.51■□□□□ 0.71
SLC1A4-201ENST00000234256 SLF2Q8IX21 1173 aa19.51■□□□□ 0.71
SLC1A4-201ENST00000234256 CCDC24Q8N4L8 307 aa19.51■□□□□ 0.71
SLC1A4-201ENST00000234256 BABAM1Q9NWV8 329 aa19.51■□□□□ 0.71
SLC1A4-201ENST00000234256 GUCA1BQ9UMX6 200 aa19.51■□□□□ 0.71
SLC1A4-201ENST00000234256 RIOK3O14730 519 aaKnown RBP19.51■□□□□ 0.71
SLC1A4-201ENST00000234256 SPAG1Q07617 926 aa19.51■□□□□ 0.71
SLC1A4-201ENST00000234256 ANGEL1Q9UNK9 670 aaKnown RBP19.51■□□□□ 0.71
SLC1A4-201ENST00000234256 CHMP4BP1P59074 171 aa19.51■□□□□ 0.71
SLC1A4-201ENST00000234256 CLSTN2Q9H4D0 955 aa19.51■□□□□ 0.71
SLC1A4-201ENST00000234256 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.5■□□□□ 0.71
SLC1A4-201ENST00000234256 KIAA0232Q92628 1395 aa19.5■□□□□ 0.71
SLC1A4-201ENST00000234256 CTAGE15A4D2H0 777 aa19.5■□□□□ 0.71
SLC1A4-201ENST00000234256 CTAGE8P0CG41 777 aa19.5■□□□□ 0.71
SLC1A4-201ENST00000234256 U2AF2P26368 475 aaKnown RBP eCLIP19.5■□□□□ 0.71
SLC1A4-201ENST00000234256 CCT6AP40227 531 aaKnown RBP19.5■□□□□ 0.71
SLC1A4-201ENST00000234256 ADCK5Q3MIX3 580 aa19.5■□□□□ 0.71
SLC1A4-201ENST00000234256 CTAGE6Q86UF2 777 aa19.5■□□□□ 0.71
SLC1A4-201ENST00000234256 CTAGE4Q8IX94 777 aa19.5■□□□□ 0.71
SLC1A4-201ENST00000234256 ALS2CR12Q96Q35 445 aa19.5■□□□□ 0.71
SLC1A4-201ENST00000234256 ERVK-7P63135 1459 aa19.5■□□□□ 0.71
SLC1A4-201ENST00000234256 KIF20AO95235 890 aa19.5■□□□□ 0.71
SLC1A4-201ENST00000234256 DIS3L2Q8IYB7 885 aaKnown RBP19.5■□□□□ 0.71
SLC1A4-201ENST00000234256 CUL5Q93034 780 aa19.5■□□□□ 0.71
SLC1A4-201ENST00000234256 ZNF622Q969S3 477 aaKnown RBP eCLIP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms