RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 ADGRL3Q9HAR2 1447 aa23.22■■□□□ 1.31
PPP1R3F-201ENST00000055335 AKAP4Q5JQC9 854 aa23.21■■□□□ 1.31
PPP1R3F-201ENST00000055335 SPECC1Q5M775 1068 aa23.21■■□□□ 1.31
PPP1R3F-201ENST00000055335 GOLGA8BA8MQT2 603 aa23.21■■□□□ 1.31
PPP1R3F-201ENST00000055335 HMGB1P09429 215 aaKnown RBP23.21■■□□□ 1.31
PPP1R3F-201ENST00000055335 FDPSP14324 419 aaKnown RBP23.21■■□□□ 1.31
PPP1R3F-201ENST00000055335 CASQ1P31415 396 aa23.21■■□□□ 1.31
PPP1R3F-201ENST00000055335 NLRP12P59046 1061 aa23.21■■□□□ 1.31
PPP1R3F-201ENST00000055335 SMC1AQ14683 1233 aaKnown RBP23.21■■□□□ 1.31
PPP1R3F-201ENST00000055335 SASH3O75995 380 aa23.21■■□□□ 1.31
PPP1R3F-201ENST00000055335 ADKP55263 362 aaKnown RBP23.21■■□□□ 1.31
PPP1R3F-201ENST00000055335 GCKRQ14397 625 aa23.21■■□□□ 1.31
PPP1R3F-201ENST00000055335 NEURL1BA8MQ27 555 aa23.2■■□□□ 1.3
PPP1R3F-201ENST00000055335 FANCGO15287 622 aa23.2■■□□□ 1.3
PPP1R3F-201ENST00000055335 AIFM3Q96NN9 605 aa23.2■■□□□ 1.3
PPP1R3F-201ENST00000055335 SPATA31D1Q6ZQQ2 1576 aa23.2■■□□□ 1.3
PPP1R3F-201ENST00000055335 KLF18A0A0U1RQI7 1052 aa23.2■■□□□ 1.3
PPP1R3F-201ENST00000055335 WDR24Q96S15 920 aa23.2■■□□□ 1.3
PPP1R3F-201ENST00000055335 SYKP43405 635 aa23.2■■□□□ 1.3
PPP1R3F-201ENST00000055335 GPS2Q13227 327 aa23.2■■□□□ 1.3
PPP1R3F-201ENST00000055335 MCM6Q14566 821 aa23.2■■□□□ 1.3
PPP1R3F-201ENST00000055335 CCDC191Q8NCU4 936 aa23.2■■□□□ 1.3
PPP1R3F-201ENST00000055335 FANCLQ9NW38 375 aa23.2■■□□□ 1.3
PPP1R3F-201ENST00000055335 RTEL1Q9NZ71 1219 aa23.19■■□□□ 1.3
PPP1R3F-201ENST00000055335 TMEM2Q9UHN6 1383 aa23.19■■□□□ 1.3
PPP1R3F-201ENST00000055335 A0A087WZG4 1122 aa23.19■■□□□ 1.3
PPP1R3F-201ENST00000055335 NCAPHQ15003 741 aa23.19■■□□□ 1.3
PPP1R3F-201ENST00000055335 KCNG4Q8TDN1 519 aa23.19■■□□□ 1.3
PPP1R3F-201ENST00000055335 AKAP12Q02952 1782 aa23.19■■□□□ 1.3
PPP1R3F-201ENST00000055335 PTPN12Q05209 780 aaKnown RBP23.18■■□□□ 1.3
PPP1R3F-201ENST00000055335 MYSM1Q5VVJ2 828 aa23.18■■□□□ 1.3
PPP1R3F-201ENST00000055335 DDX21Q9NR30 783 aaKnown RBP eCLIP23.18■■□□□ 1.3
PPP1R3F-201ENST00000055335 RGPD1P0DJD0 1748 aa23.18■■□□□ 1.3
PPP1R3F-201ENST00000055335 TADA3O75528 432 aa23.18■■□□□ 1.3
PPP1R3F-201ENST00000055335 HSPD1P10809 573 aaKnown RBP23.18■■□□□ 1.3
PPP1R3F-201ENST00000055335 CLIC6Q96NY7 704 aa23.18■■□□□ 1.3
PPP1R3F-201ENST00000055335 ARFGAP3Q9NP61 516 aa23.18■■□□□ 1.3
PPP1R3F-201ENST00000055335 CEMIPQ8WUJ3 1361 aa23.18■■□□□ 1.3
PPP1R3F-201ENST00000055335 TRIM65Q6PJ69 517 aa23.18■■□□□ 1.3
PPP1R3F-201ENST00000055335 KBTBD3Q8NAB2 608 aa23.18■■□□□ 1.3
PPP1R3F-201ENST00000055335 IRX2Q9BZI1 471 aaPredicted RBP23.18■■□□□ 1.3
PPP1R3F-201ENST00000055335 PAG1Q9NWQ8 432 aa23.18■■□□□ 1.3
PPP1R3F-201ENST00000055335 PUF60Q9UHX1 559 aaKnown RBP23.18■■□□□ 1.3
PPP1R3F-201ENST00000055335 LRRFIP1Q32MZ4 808 aaKnown RBP23.17■■□□□ 1.3
PPP1R3F-201ENST00000055335 LMBR1LQ6UX01 489 aa23.17■■□□□ 1.3
PPP1R3F-201ENST00000055335 CPLX3Q8WVH0 158 aa23.17■■□□□ 1.3
PPP1R3F-201ENST00000055335 KIF28PB7ZC32 967 aa23.17■■□□□ 1.3
PPP1R3F-201ENST00000055335 PPP2R3AQ06190 1150 aa23.17■■□□□ 1.3
PPP1R3F-201ENST00000055335 OLFM4Q6UX06 510 aa23.17■■□□□ 1.3
PPP1R3F-201ENST00000055335 PPP2R2CQ9Y2T4 447 aa23.17■■□□□ 1.3
PPP1R3F-201ENST00000055335 TRIM66O15016 1216 aa23.17■■□□□ 1.3
PPP1R3F-201ENST00000055335 ZRANB2O95218 330 aaKnown RBP eCLIP23.17■■□□□ 1.3
PPP1R3F-201ENST00000055335 CCDC85AQ96PX6 553 aaPredicted RBP23.17■■□□□ 1.3
PPP1R3F-201ENST00000055335 PARP3Q9Y6F1 533 aa23.17■■□□□ 1.3
PPP1R3F-201ENST00000055335 CCP110O43303 1012 aa23.16■■□□□ 1.3
PPP1R3F-201ENST00000055335 ATP2B1P20020 1258 aa23.16■■□□□ 1.3
PPP1R3F-201ENST00000055335 ZSCAN26Q16670 478 aa23.16■■□□□ 1.3
PPP1R3F-201ENST00000055335 CCDC12Q8WUD4 166 aaPredicted RBP23.16■■□□□ 1.3
PPP1R3F-201ENST00000055335 IP6K1Q92551 441 aa23.16■■□□□ 1.3
PPP1R3F-201ENST00000055335 WDHD1O75717 1129 aaPredicted RBP23.16■■□□□ 1.3
PPP1R3F-201ENST00000055335 PSME1Q06323 249 aa23.16■■□□□ 1.3
PPP1R3F-201ENST00000055335 ANO1Q5XXA6 986 aa23.16■■□□□ 1.3
PPP1R3F-201ENST00000055335 LZTFL1Q9NQ48 299 aa23.16■■□□□ 1.3
PPP1R3F-201ENST00000055335 ZSCAN12O43309 604 aa23.15■■□□□ 1.3
PPP1R3F-201ENST00000055335 HAUS7Q99871 368 aa23.15■■□□□ 1.3
PPP1R3F-201ENST00000055335 TECPR2O15040 1411 aa23.15■■□□□ 1.3
PPP1R3F-201ENST00000055335 TNRQ92752 1358 aa23.15■■□□□ 1.3
PPP1R3F-201ENST00000055335 EFCAB8A8MWE9 144 aa23.15■■□□□ 1.3
PPP1R3F-201ENST00000055335 TBC1D8O95759 1140 aa23.15■■□□□ 1.3
PPP1R3F-201ENST00000055335 PARD6BQ9BYG5 372 aa23.15■■□□□ 1.3
PPP1R3F-201ENST00000055335 MYL5Q02045 173 aa23.15■■□□□ 1.3
PPP1R3F-201ENST00000055335 CC2D1AQ6P1N0 951 aaPredicted RBP23.15■■□□□ 1.3
PPP1R3F-201ENST00000055335 ANKRD13DQ6ZTN6 518 aa23.15■■□□□ 1.3
PPP1R3F-201ENST00000055335 TRMT44Q8IYL2 757 aaKnown RBP23.15■■□□□ 1.3
PPP1R3F-201ENST00000055335 TXLNBQ8N3L3 684 aa23.15■■□□□ 1.3
PPP1R3F-201ENST00000055335 FEZ2Q9UHY8 353 aaPredicted RBP23.15■■□□□ 1.3
PPP1R3F-201ENST00000055335 PHACTR2O75167 634 aa23.14■■□□□ 1.3
PPP1R3F-201ENST00000055335 EXOSC10Q01780 885 aaKnown RBP23.14■■□□□ 1.3
PPP1R3F-201ENST00000055335 REXO1L1PQ8IX06 675 aa23.14■■□□□ 1.3
PPP1R3F-201ENST00000055335 NRXN3Q9Y4C0 1643 aa23.14■■□□□ 1.3
PPP1R3F-201ENST00000055335 ZNF827Q17R98 1081 aa23.14■■□□□ 1.29
PPP1R3F-201ENST00000055335 CREBRFQ8IUR6 639 aa23.14■■□□□ 1.29
PPP1R3F-201ENST00000055335 BAG1Q99933 345 aaPredicted RBP23.14■■□□□ 1.29
PPP1R3F-201ENST00000055335 PHLPP2Q6ZVD8 1323 aa23.14■■□□□ 1.29
PPP1R3F-201ENST00000055335 A0A1W2PQ27 194 aa23.14■■□□□ 1.29
PPP1R3F-201ENST00000055335 A0A1W2PQ64 194 aa23.14■■□□□ 1.29
PPP1R3F-201ENST00000055335 A0A1W2PQD8 194 aa23.14■■□□□ 1.29
PPP1R3F-201ENST00000055335 ATL3Q6DD88 541 aa23.14■■□□□ 1.29
PPP1R3F-201ENST00000055335 TOGARAM2Q6ZUX3 1019 aa23.14■■□□□ 1.29
PPP1R3F-201ENST00000055335 ZNF594Q96JF6 807 aaPredicted RBP23.14■■□□□ 1.29
PPP1R3F-201ENST00000055335 IFIT1P09914 478 aaKnown RBP23.13■■□□□ 1.29
PPP1R3F-201ENST00000055335 FBXO18Q8NFZ0 1043 aa23.13■■□□□ 1.29
PPP1R3F-201ENST00000055335 MROH7-TTC4A0A0A0MT08 1334 aa23.13■■□□□ 1.29
PPP1R3F-201ENST00000055335 CBFA2T2O43439 604 aa23.13■■□□□ 1.29
PPP1R3F-201ENST00000055335 PRC1O43663 620 aa23.13■■□□□ 1.29
PPP1R3F-201ENST00000055335 RALYLQ86SE5 291 aaKnown RBP23.13■■□□□ 1.29
PPP1R3F-201ENST00000055335 VWA3AA6NCI4 1184 aa23.13■■□□□ 1.29
PPP1R3F-201ENST00000055335 DHX58Q96C10 678 aa23.13■■□□□ 1.29
PPP1R3F-201ENST00000055335 LCMT1Q9UIC8 334 aa23.13■■□□□ 1.29
PPP1R3F-201ENST00000055335 RICTORQ6R327 1708 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms