RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 DYNC1I2Q13409 638 aaKnown RBP13.58□□□□□ -0.24
USB1-211ENST00000565662 RSU1Q15404 277 aa13.58□□□□□ -0.24
USB1-211ENST00000565662 NHLRC3Q5JS37 347 aa13.58□□□□□ -0.24
USB1-211ENST00000565662 CCDC144NLQ6NUI1 221 aa13.58□□□□□ -0.24
USB1-211ENST00000565662 Q6ZTK2 550 aa13.58□□□□□ -0.24
USB1-211ENST00000565662 ZNF565Q8N9K5 539 aa13.58□□□□□ -0.24
USB1-211ENST00000565662 OR51T1Q8NGJ9 327 aa13.58□□□□□ -0.24
USB1-211ENST00000565662 RFT1Q96AA3 541 aa13.58□□□□□ -0.24
USB1-211ENST00000565662 BARHL1Q9BZE3 327 aa13.58□□□□□ -0.24
USB1-211ENST00000565662 CHST6Q9GZX3 395 aa13.58□□□□□ -0.24
USB1-211ENST00000565662 RAB9BQ9NP90 201 aa13.58□□□□□ -0.24
USB1-211ENST00000565662 ODAMA1E959 279 aa13.57□□□□□ -0.24
USB1-211ENST00000565662 OOSP1A8MZH6 123 aa13.57□□□□□ -0.24
USB1-211ENST00000565662 SIRPB1O00241 398 aa13.57□□□□□ -0.24
USB1-211ENST00000565662 MYL12BO14950 172 aa13.57□□□□□ -0.24
USB1-211ENST00000565662 OGG1O15527 345 aa13.57□□□□□ -0.24
USB1-211ENST00000565662 CSTBP04080 98 aaKnown RBP13.57□□□□□ -0.24
USB1-211ENST00000565662 HTR1DP28221 377 aa13.57□□□□□ -0.24
USB1-211ENST00000565662 CD34P28906 385 aa13.57□□□□□ -0.24
USB1-211ENST00000565662 BRS3P32247 399 aa13.57□□□□□ -0.24
USB1-211ENST00000565662 KRBOX4Q5JUW0 171 aa13.57□□□□□ -0.24
USB1-211ENST00000565662 CDH26Q8IXH8 852 aa13.57□□□□□ -0.24
USB1-211ENST00000565662 Q8NFD4 153 aa13.57□□□□□ -0.24
USB1-211ENST00000565662 OR4S1Q8NGB4 309 aa13.57□□□□□ -0.24
USB1-211ENST00000565662 OR52N4Q8NGI2 321 aa13.57□□□□□ -0.24
USB1-211ENST00000565662 OR51A2Q8NGJ7 313 aa13.57□□□□□ -0.24
USB1-211ENST00000565662 OR5D18Q8NGL1 313 aa13.57□□□□□ -0.24
USB1-211ENST00000565662 NDNFQ8TB73 568 aa13.57□□□□□ -0.24
USB1-211ENST00000565662 TNFAIP8L1Q8WVP5 186 aa13.57□□□□□ -0.24
USB1-211ENST00000565662 METTL9Q9H1A3 318 aa13.57□□□□□ -0.24
USB1-211ENST00000565662 IFT22Q9H7X7 185 aa13.57□□□□□ -0.24
USB1-211ENST00000565662 DCLRE1BQ9H816 532 aa13.57□□□□□ -0.24
USB1-211ENST00000565662 AASSQ9UDR5 926 aa13.57□□□□□ -0.24
USB1-211ENST00000565662 TCF19Q9Y242 345 aa13.57□□□□□ -0.24
USB1-211ENST00000565662 AMMECR1Q9Y4X0 333 aaPredicted RBP13.57□□□□□ -0.24
USB1-211ENST00000565662 IGKV1-12A0A0C4DH73 117 aa13.56□□□□□ -0.24
USB1-211ENST00000565662 F2RL2O00254 374 aa13.56□□□□□ -0.24
USB1-211ENST00000565662 IGKV1D-12P01611 117 aa13.56□□□□□ -0.24
USB1-211ENST00000565662 CD1AP06126 327 aa13.56□□□□□ -0.24
USB1-211ENST00000565662 FSTP19883 344 aa13.56□□□□□ -0.24
USB1-211ENST00000565662 C21orf33P30042 268 aaPredicted RBP13.56□□□□□ -0.24
USB1-211ENST00000565662 BDKRB2P30411 391 aa13.56□□□□□ -0.24
USB1-211ENST00000565662 ETV1P50549 477 aa13.56□□□□□ -0.24
USB1-211ENST00000565662 DLX1P56177 255 aa13.56□□□□□ -0.24
USB1-211ENST00000565662 ADARB1P78563 741 aaKnown RBP13.56□□□□□ -0.24
USB1-211ENST00000565662 BDH1Q02338 343 aa13.56□□□□□ -0.24
USB1-211ENST00000565662 RIPK1Q13546 671 aa13.56□□□□□ -0.24
USB1-211ENST00000565662 FAM189A2Q15884 450 aa13.56□□□□□ -0.24
USB1-211ENST00000565662 LRRC36Q1X8D7 754 aa13.56□□□□□ -0.24
USB1-211ENST00000565662 Q499Y3 187 aa13.56□□□□□ -0.24
USB1-211ENST00000565662 OGFRL1Q5TC84 451 aaPredicted RBP13.56□□□□□ -0.24
USB1-211ENST00000565662 OR10A7Q8NGE5 316 aa13.56□□□□□ -0.24
USB1-211ENST00000565662 CNIH3Q8TBE1 160 aa13.56□□□□□ -0.24
USB1-211ENST00000565662 CAPSLQ8WWF8 208 aa13.56□□□□□ -0.24
USB1-211ENST00000565662 MRPS24Q96EL2 167 aaKnown RBP13.56□□□□□ -0.24
USB1-211ENST00000565662 SPACA5Q96QH8 159 aa13.56□□□□□ -0.24
USB1-211ENST00000565662 FAM192AQ9GZU8 254 aa13.56□□□□□ -0.24
USB1-211ENST00000565662 SPACA1Q9HBV2 294 aa13.56□□□□□ -0.24
USB1-211ENST00000565662 PLCXD1Q9NUJ7 323 aa13.56□□□□□ -0.24
USB1-211ENST00000565662 IL36RNQ9UBH0 155 aa13.56□□□□□ -0.24
USB1-211ENST00000565662 MGAM2Q2M2H8 2515 aa13.55□□□□□ -0.24
USB1-211ENST00000565662 A0A0G2JK05 382 aa13.55□□□□□ -0.24
USB1-211ENST00000565662 E9PI62 339 aa13.55□□□□□ -0.24
USB1-211ENST00000565662 SLC33A1O00400 549 aaPredicted RBP13.55□□□□□ -0.24
USB1-211ENST00000565662 GPX5O75715 221 aa13.55□□□□□ -0.24
USB1-211ENST00000565662 DUSP1P28562 367 aa13.55□□□□□ -0.24
USB1-211ENST00000565662 ZNF93P35789 620 aaPredicted RBP13.55□□□□□ -0.24
USB1-211ENST00000565662 RANBP1P43487 201 aa13.55□□□□□ -0.24
USB1-211ENST00000565662 PRRX1P54821 245 aa13.55□□□□□ -0.24
USB1-211ENST00000565662 SNU13P55769 128 aaKnown RBP13.55□□□□□ -0.24
USB1-211ENST00000565662 PRB3Q04118 309 aaPredicted RBP13.55□□□□□ -0.24
USB1-211ENST00000565662 SLC34A1Q06495 639 aa13.55□□□□□ -0.24
USB1-211ENST00000565662 HERPUD1Q15011 391 aa13.55□□□□□ -0.24
USB1-211ENST00000565662 SMN1Q16637 294 aaKnown RBP13.55□□□□□ -0.24
USB1-211ENST00000565662 MPV17LQ2QL34 196 aa13.55□□□□□ -0.24
USB1-211ENST00000565662 PAN3Q58A45 887 aaKnown RBP13.55□□□□□ -0.24
USB1-211ENST00000565662 DDI2Q5TDH0 399 aa13.55□□□□□ -0.24
USB1-211ENST00000565662 CRIP3Q6Q6R5 217 aa13.55□□□□□ -0.24
USB1-211ENST00000565662 ASCL4Q6XD76 172 aa13.55□□□□□ -0.24
USB1-211ENST00000565662 SLC16A12Q6ZSM3 486 aa13.55□□□□□ -0.24
USB1-211ENST00000565662 TCF23Q7RTU1 214 aa13.55□□□□□ -0.24
USB1-211ENST00000565662 STX19Q8N4C7 294 aa13.55□□□□□ -0.24
USB1-211ENST00000565662 DPM3Q9P2X0 92 aa13.55□□□□□ -0.24
USB1-211ENST00000565662 A0A087X0M5 115 aa13.54□□□□□ -0.24
USB1-211ENST00000565662 A0A1B0GX30 115 aa13.54□□□□□ -0.24
USB1-211ENST00000565662 LEUTXA8MZ59 168 aa13.54□□□□□ -0.24
USB1-211ENST00000565662 H0YJX3 145 aa13.54□□□□□ -0.24
USB1-211ENST00000565662 GABRPO00591 440 aa13.54□□□□□ -0.24
USB1-211ENST00000565662 TOR1AO14656 332 aa13.54□□□□□ -0.24
USB1-211ENST00000565662 CDK2P24941 298 aa13.54□□□□□ -0.24
USB1-211ENST00000565662 MNDAP41218 407 aa13.54□□□□□ -0.24
USB1-211ENST00000565662 SOX2P48431 317 aa13.54□□□□□ -0.24
USB1-211ENST00000565662 ST3GAL4Q11206 333 aa13.54□□□□□ -0.24
USB1-211ENST00000565662 SSX2Q16385 188 aa13.54□□□□□ -0.24
USB1-211ENST00000565662 DMKNQ6E0U4 476 aaPredicted RBP13.54□□□□□ -0.24
USB1-211ENST00000565662 SLC35E4Q6ICL7 350 aa13.54□□□□□ -0.24
USB1-211ENST00000565662 Q6P435 159 aa13.54□□□□□ -0.24
USB1-211ENST00000565662 SATL1Q86VE3 508 aa13.54□□□□□ -0.24
USB1-211ENST00000565662 ABHD12Q8N2K0 398 aa13.54□□□□□ -0.24
USB1-211ENST00000565662 NKAIN3Q8N8D7 197 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms