RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 EIF2S3P41091 472 aaKnown RBP16.26■□□□□ 0.19
SMPD3-203ENST00000563226 ZNF154Q13106 437 aa16.26■□□□□ 0.19
SMPD3-203ENST00000563226 PHLDA2Q53GA4 152 aa16.26■□□□□ 0.19
SMPD3-203ENST00000563226 BHLHA15Q7RTS1 189 aaPredicted RBP16.26■□□□□ 0.19
SMPD3-203ENST00000563226 SGPP2Q8IWX5 399 aa16.26■□□□□ 0.19
SMPD3-203ENST00000563226 KCNRGQ8N5I3 272 aa16.26■□□□□ 0.19
SMPD3-203ENST00000563226 THAP6Q8TBB0 222 aa16.26■□□□□ 0.19
SMPD3-203ENST00000563226 DHRS9Q9BPW9 319 aa16.26■□□□□ 0.19
SMPD3-203ENST00000563226 PLK3Q9H4B4 646 aa16.26■□□□□ 0.19
SMPD3-203ENST00000563226 FZR1Q9UM11 496 aa16.26■□□□□ 0.19
SMPD3-203ENST00000563226 IGHV1-18A0A0C4DH31 117 aa16.25■□□□□ 0.19
SMPD3-203ENST00000563226 SPDEFO95238 335 aa16.25■□□□□ 0.19
SMPD3-203ENST00000563226 IGLV1-44P01699 117 aa16.25■□□□□ 0.19
SMPD3-203ENST00000563226 RBMXP38159 391 aaKnown RBP16.25■□□□□ 0.19
SMPD3-203ENST00000563226 GLP1RP43220 463 aa16.25■□□□□ 0.19
SMPD3-203ENST00000563226 IL13RA2Q14627 380 aa16.25■□□□□ 0.19
SMPD3-203ENST00000563226 HERPUD1Q15011 391 aa16.25■□□□□ 0.19
SMPD3-203ENST00000563226 C20orf204Q6ZNR8 217 aa16.25■□□□□ 0.19
SMPD3-203ENST00000563226 Q6ZS49 121 aa16.25■□□□□ 0.19
SMPD3-203ENST00000563226 OR11L1Q8NGX0 322 aa16.25■□□□□ 0.19
SMPD3-203ENST00000563226 RNF126Q9BV68 326 aa16.25■□□□□ 0.19
SMPD3-203ENST00000563226 GSX2Q9BZM3 304 aa16.25■□□□□ 0.19
SMPD3-203ENST00000563226 CDIPTO14735 213 aa16.25■□□□□ 0.19
SMPD3-203ENST00000563226 B3GALNT1O75752 331 aa16.25■□□□□ 0.19
SMPD3-203ENST00000563226 RBM39Q14498 530 aaKnown RBP16.25■□□□□ 0.19
SMPD3-203ENST00000563226 ZNF345Q14585 488 aa16.25■□□□□ 0.19
SMPD3-203ENST00000563226 SP6Q3SY56 376 aa16.25■□□□□ 0.19
SMPD3-203ENST00000563226 LINC00596Q86U02 117 aa16.25■□□□□ 0.19
SMPD3-203ENST00000563226 POC1AQ8NBT0 407 aa16.25■□□□□ 0.19
SMPD3-203ENST00000563226 OR5T2Q8NGG2 359 aa16.25■□□□□ 0.19
SMPD3-203ENST00000563226 MRPL30Q8TCC3 161 aaKnown RBP16.25■□□□□ 0.19
SMPD3-203ENST00000563226 TINAGQ9UJW2 476 aa16.25■□□□□ 0.19
SMPD3-203ENST00000563226 HEATR1Q9H583 2144 aaKnown RBP16.24■□□□□ 0.19
SMPD3-203ENST00000563226 A0A0D9SG52 128 aa16.24■□□□□ 0.19
SMPD3-203ENST00000563226 OR5H1A6NKK0 313 aa16.24■□□□□ 0.19
SMPD3-203ENST00000563226 MLNRO43193 412 aa16.24■□□□□ 0.19
SMPD3-203ENST00000563226 OR2F2O95006 317 aa16.24■□□□□ 0.19
SMPD3-203ENST00000563226 PPYP01298 95 aa16.24■□□□□ 0.19
SMPD3-203ENST00000563226 OR2F1Q13607 317 aa16.24■□□□□ 0.19
SMPD3-203ENST00000563226 P2RY6Q15077 328 aa16.24■□□□□ 0.19
SMPD3-203ENST00000563226 C1orf185Q5T7R7 199 aa16.24■□□□□ 0.19
SMPD3-203ENST00000563226 Q6P435 159 aa16.24■□□□□ 0.19
SMPD3-203ENST00000563226 ACOT7LQ6ZUV0 252 aa16.24■□□□□ 0.19
SMPD3-203ENST00000563226 SLC51BQ86UW2 128 aa16.24■□□□□ 0.19
SMPD3-203ENST00000563226 RTN4IP1Q8WWV3 396 aaPredicted RBP16.24■□□□□ 0.19
SMPD3-203ENST00000563226 NAA60Q9H7X0 242 aa16.24■□□□□ 0.19
SMPD3-203ENST00000563226 SLC2A9Q9NRM0 540 aa16.24■□□□□ 0.19
SMPD3-203ENST00000563226 C1orf123Q9NWV4 160 aa16.24■□□□□ 0.19
SMPD3-203ENST00000563226 AUP1Q9Y679 476 aa16.24■□□□□ 0.19
SMPD3-203ENST00000563226 BET1O15155 118 aa16.23■□□□□ 0.19
SMPD3-203ENST00000563226 TPD52L2O43399 206 aaKnown RBP16.23■□□□□ 0.19
SMPD3-203ENST00000563226 CRYABP02511 175 aaKnown RBP16.23■□□□□ 0.19
SMPD3-203ENST00000563226 GRPP07492 148 aa16.23■□□□□ 0.19
SMPD3-203ENST00000563226 ERVK11-1P61568 191 aa16.23■□□□□ 0.19
SMPD3-203ENST00000563226 OR8G1Q15617 311 aa16.23■□□□□ 0.19
SMPD3-203ENST00000563226 ABCA11PQ4W5N1 156 aa16.23■□□□□ 0.19
SMPD3-203ENST00000563226 ZNF474Q6S9Z5 364 aaPredicted RBP16.23■□□□□ 0.19
SMPD3-203ENST00000563226 PIK3IP1Q96FE7 263 aa16.23■□□□□ 0.19
SMPD3-203ENST00000563226 ABHD17AQ96GS6 310 aa16.23■□□□□ 0.19
SMPD3-203ENST00000563226 C2orf50Q96LR7 162 aa16.23■□□□□ 0.19
SMPD3-203ENST00000563226 PURGQ9UJV8 347 aaKnown RBP16.23■□□□□ 0.19
SMPD3-203ENST00000563226 IGHV2OR16-5A0A0B4J2B6 119 aa16.23■□□□□ 0.19
SMPD3-203ENST00000563226 IGKV1-6A0A0C4DH72 117 aa16.23■□□□□ 0.19
SMPD3-203ENST00000563226 RLN2P04090 185 aa16.23■□□□□ 0.19
SMPD3-203ENST00000563226 OR5AC1P0C628 307 aa16.23■□□□□ 0.19
SMPD3-203ENST00000563226 GLI4P10075 376 aa16.23■□□□□ 0.19
SMPD3-203ENST00000563226 HERV-K104P61576 105 aa16.23■□□□□ 0.19
SMPD3-203ENST00000563226 CYCSP99999 105 aaKnown RBP16.23■□□□□ 0.19
SMPD3-203ENST00000563226 HOXA4Q00056 320 aaPredicted RBP16.23■□□□□ 0.19
SMPD3-203ENST00000563226 SRSF7Q16629 238 aaKnown RBP eCLIP16.23■□□□□ 0.19
SMPD3-203ENST00000563226 BEND4Q6ZU67 534 aa16.23■□□□□ 0.19
SMPD3-203ENST00000563226 DCUN1D4Q92564 292 aa16.23■□□□□ 0.19
SMPD3-203ENST00000563226 MRPL24Q96A35 216 aaKnown RBP16.23■□□□□ 0.19
SMPD3-203ENST00000563226 RRNAD1Q96FB5 475 aaKnown RBP16.23■□□□□ 0.19
SMPD3-203ENST00000563226 SCNM1Q9BWG6 230 aa16.23■□□□□ 0.19
SMPD3-203ENST00000563226 SPACA1Q9HBV2 294 aa16.23■□□□□ 0.19
SMPD3-203ENST00000563226 OR5AC2Q9NZP5 309 aa16.23■□□□□ 0.19
SMPD3-203ENST00000563226 WASF3Q9UPY6 502 aa16.23■□□□□ 0.19
SMPD3-203ENST00000563226 SLC25A15Q9Y619 301 aa16.23■□□□□ 0.19
SMPD3-203ENST00000563226 CUL9Q8IWT3 2517 aa16.22■□□□□ 0.19
SMPD3-203ENST00000563226 POM121CA8CG34 1229 aa16.22■□□□□ 0.19
SMPD3-203ENST00000563226 MKRN2OSH3BPM6 223 aa16.22■□□□□ 0.19
SMPD3-203ENST00000563226 BCL2L11O43521 198 aa16.22■□□□□ 0.19
SMPD3-203ENST00000563226 ZNF44P15621 663 aa16.22■□□□□ 0.19
SMPD3-203ENST00000563226 UCP3P55916 312 aa16.22■□□□□ 0.19
SMPD3-203ENST00000563226 RAB14P61106 215 aa16.22■□□□□ 0.19
SMPD3-203ENST00000563226 IL15RAQ13261 267 aa16.22■□□□□ 0.19
SMPD3-203ENST00000563226 SLC38A6Q8IZM9 456 aa16.22■□□□□ 0.19
SMPD3-203ENST00000563226 NRIP2Q9BQI9 281 aa16.22■□□□□ 0.19
SMPD3-203ENST00000563226 RSRP1Q9BUV0 290 aa16.22■□□□□ 0.19
SMPD3-203ENST00000563226 OBP2BQ9NPH6 170 aa16.22■□□□□ 0.19
SMPD3-203ENST00000563226 TP53TG5Q9Y2B4 290 aa16.22■□□□□ 0.19
SMPD3-203ENST00000563226 ARID1AO14497 2285 aa16.22■□□□□ 0.19
SMPD3-203ENST00000563226 TRBV6-7A0A0A0MS04 114 aa16.22■□□□□ 0.19
SMPD3-203ENST00000563226 PGA5P0DJD9 388 aa16.22■□□□□ 0.19
SMPD3-203ENST00000563226 RAB32Q13637 225 aa16.22■□□□□ 0.19
SMPD3-203ENST00000563226 TMEM187Q14656 261 aa16.22■□□□□ 0.19
SMPD3-203ENST00000563226 ALKBH2Q6NS38 261 aa16.22■□□□□ 0.19
SMPD3-203ENST00000563226 OR8G5Q8NG78 346 aa16.22■□□□□ 0.19
SMPD3-203ENST00000563226 SCARB1Q8WTV0 552 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms