RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 CYB5R3P00387 301 aaPredicted RBP12.14□□□□□ -0.47
RABGGTA-220ENST00000560998 IGHG1P01857 330 aa12.14□□□□□ -0.47
RABGGTA-220ENST00000560998 SFTPDP35247 375 aa12.14□□□□□ -0.47
RABGGTA-220ENST00000560998 ERVFC1-1P60608 527 aa12.14□□□□□ -0.47
RABGGTA-220ENST00000560998 IQCJQ1A5X6 159 aa12.14□□□□□ -0.47
RABGGTA-220ENST00000560998 CYB5R2Q6BCY4 276 aa12.14□□□□□ -0.47
RABGGTA-220ENST00000560998 SPSB3Q6PJ21 355 aa12.14□□□□□ -0.47
RABGGTA-220ENST00000560998 DEFB123Q8N688 67 aa12.14□□□□□ -0.47
RABGGTA-220ENST00000560998 OR5D14Q8NGL3 314 aa12.14□□□□□ -0.47
RABGGTA-220ENST00000560998 OR10S1Q8NGN2 331 aa12.14□□□□□ -0.47
RABGGTA-220ENST00000560998 OXGR1Q96P68 337 aa12.14□□□□□ -0.47
RABGGTA-220ENST00000560998 FAM206AQ9NX38 181 aa12.14□□□□□ -0.47
RABGGTA-220ENST00000560998 EHFQ9NZC4 300 aa12.14□□□□□ -0.47
RABGGTA-220ENST00000560998 PHF3Q92576 2039 aaKnown RBP12.14□□□□□ -0.47
RABGGTA-220ENST00000560998 NSG1A0A0A6YYJ2 146 aa12.14□□□□□ -0.47
RABGGTA-220ENST00000560998 P2RY10O00398 339 aa12.14□□□□□ -0.47
RABGGTA-220ENST00000560998 LMX1BO60663 402 aa12.14□□□□□ -0.47
RABGGTA-220ENST00000560998 HBE1P02100 147 aa12.14□□□□□ -0.47
RABGGTA-220ENST00000560998 MBPP02686 304 aaPredicted RBP12.14□□□□□ -0.47
RABGGTA-220ENST00000560998 KLK2P20151 261 aa12.14□□□□□ -0.47
RABGGTA-220ENST00000560998 FKBP2P26885 142 aaKnown RBP12.14□□□□□ -0.47
RABGGTA-220ENST00000560998 ICAM4Q14773 271 aa12.14□□□□□ -0.47
RABGGTA-220ENST00000560998 HAGHQ16775 308 aa12.14□□□□□ -0.47
RABGGTA-220ENST00000560998 PLAC9Q5JTB6 97 aa12.14□□□□□ -0.47
RABGGTA-220ENST00000560998 SLC23A3Q6PIS1 610 aa12.14□□□□□ -0.47
RABGGTA-220ENST00000560998 SLC25A47Q6Q0C1 308 aa12.14□□□□□ -0.47
RABGGTA-220ENST00000560998 PLXDC2Q6UX71 529 aa12.14□□□□□ -0.47
RABGGTA-220ENST00000560998 DPPA3Q6W0C5 159 aa12.14□□□□□ -0.47
RABGGTA-220ENST00000560998 OR2Y1Q8NGV0 311 aa12.14□□□□□ -0.47
RABGGTA-220ENST00000560998 OR10J5Q8NHC4 309 aa12.14□□□□□ -0.47
RABGGTA-220ENST00000560998 ACY3Q96HD9 319 aa12.14□□□□□ -0.47
RABGGTA-220ENST00000560998 ATG101Q9BSB4 218 aa12.14□□□□□ -0.47
RABGGTA-220ENST00000560998 CTDSP1Q9GZU7 261 aa12.14□□□□□ -0.47
RABGGTA-220ENST00000560998 A0A0A6YYD4 124 aa12.13□□□□□ -0.47
RABGGTA-220ENST00000560998 AQP7P3A6NL99 342 aa12.13□□□□□ -0.47
RABGGTA-220ENST00000560998 SCGB1D2O95969 90 aa12.13□□□□□ -0.47
RABGGTA-220ENST00000560998 PGA5P0DJD9 388 aa12.13□□□□□ -0.47
RABGGTA-220ENST00000560998 CCKARP32238 428 aa12.13□□□□□ -0.47
RABGGTA-220ENST00000560998 ZNF93P35789 620 aaPredicted RBP12.13□□□□□ -0.47
RABGGTA-220ENST00000560998 NOVA1P51513 510 aaKnown RBP12.13□□□□□ -0.47
RABGGTA-220ENST00000560998 CSNK2A1P68400 391 aaPredicted RBP12.13□□□□□ -0.47
RABGGTA-220ENST00000560998 ARL6IP1Q15041 203 aa12.13□□□□□ -0.47
RABGGTA-220ENST00000560998 TAF9Q16594 264 aa12.13□□□□□ -0.47
RABGGTA-220ENST00000560998 SP5Q6BEB4 398 aaPredicted RBP12.13□□□□□ -0.47
RABGGTA-220ENST00000560998 RTL6Q6ICC9 239 aa12.13□□□□□ -0.47
RABGGTA-220ENST00000560998 SULF2Q8IWU5 870 aa12.13□□□□□ -0.47
RABGGTA-220ENST00000560998 ZNF283Q8N7M2 679 aa12.13□□□□□ -0.47
RABGGTA-220ENST00000560998 CYB561D1Q8N8Q1 229 aa12.13□□□□□ -0.47
RABGGTA-220ENST00000560998 CSNK2A3Q8NEV1 391 aa12.13□□□□□ -0.47
RABGGTA-220ENST00000560998 SEMA6DQ8NFY4 1073 aa12.13□□□□□ -0.47
RABGGTA-220ENST00000560998 NICN1Q9BSH3 213 aa12.13□□□□□ -0.47
RABGGTA-220ENST00000560998 URM1Q9BTM9 101 aaKnown RBP12.13□□□□□ -0.47
RABGGTA-220ENST00000560998 ANGPTL4Q9BY76 406 aa12.13□□□□□ -0.47
RABGGTA-220ENST00000560998 SRD5A3Q9H8P0 318 aa12.13□□□□□ -0.47
RABGGTA-220ENST00000560998 LHFPL6Q9Y693 200 aa12.13□□□□□ -0.47
RABGGTA-220ENST00000560998 LOC102725191A0A1B0GVB3 256 aa12.12□□□□□ -0.47
RABGGTA-220ENST00000560998 PPP5D1E7EU14 171 aa12.12□□□□□ -0.47
RABGGTA-220ENST00000560998 RRP8O43159 456 aaKnown RBP12.12□□□□□ -0.47
RABGGTA-220ENST00000560998 CDC14BO60729 498 aa12.12□□□□□ -0.47
RABGGTA-220ENST00000560998 CA11O75493 328 aa12.12□□□□□ -0.47
RABGGTA-220ENST00000560998 KNG1P01042 644 aa12.12□□□□□ -0.47
RABGGTA-220ENST00000560998 RPLP1P05386 114 aaKnown RBP12.12□□□□□ -0.47
RABGGTA-220ENST00000560998 GNALP38405 381 aa12.12□□□□□ -0.47
RABGGTA-220ENST00000560998 PDLIM4P50479 330 aa12.12□□□□□ -0.47
RABGGTA-220ENST00000560998 SSR4P51571 173 aa12.12□□□□□ -0.47
RABGGTA-220ENST00000560998 ARFRP1Q13795 201 aa12.12□□□□□ -0.47
RABGGTA-220ENST00000560998 CARD17Q5XLA6 110 aa12.12□□□□□ -0.47
RABGGTA-220ENST00000560998 KLHL24Q6TFL4 600 aa12.12□□□□□ -0.47
RABGGTA-220ENST00000560998 PRR18Q8N4B5 295 aa12.12□□□□□ -0.47
RABGGTA-220ENST00000560998 OR10A7Q8NGE5 316 aa12.12□□□□□ -0.47
RABGGTA-220ENST00000560998 MRPL24Q96A35 216 aaKnown RBP12.12□□□□□ -0.47
RABGGTA-220ENST00000560998 BSCL2Q96G97 398 aaPredicted RBP12.12□□□□□ -0.47
RABGGTA-220ENST00000560998 TMEM208Q9BTX3 173 aa12.12□□□□□ -0.47
RABGGTA-220ENST00000560998 TMEM59Q9BXS4 323 aa12.12□□□□□ -0.47
RABGGTA-220ENST00000560998 PROK2Q9HC23 129 aa12.12□□□□□ -0.47
RABGGTA-220ENST00000560998 TMEM210A6NLX4 147 aa12.12□□□□□ -0.47
RABGGTA-220ENST00000560998 TTRP02766 147 aa12.12□□□□□ -0.47
RABGGTA-220ENST00000560998 CCL3P10147 92 aa12.12□□□□□ -0.47
RABGGTA-220ENST00000560998 SNU13P55769 128 aaKnown RBP12.12□□□□□ -0.47
RABGGTA-220ENST00000560998 MFAP5Q13361 173 aa12.12□□□□□ -0.47
RABGGTA-220ENST00000560998 HIST3H3Q16695 136 aa12.12□□□□□ -0.47
RABGGTA-220ENST00000560998 LRTM2Q8N967 370 aa12.12□□□□□ -0.47
RABGGTA-220ENST00000560998 NAXEQ8NCW5 288 aa12.12□□□□□ -0.47
RABGGTA-220ENST00000560998 PBOV1Q9GZY1 135 aa12.12□□□□□ -0.47
RABGGTA-220ENST00000560998 OPN3Q9H1Y3 402 aaPredicted RBP12.12□□□□□ -0.47
RABGGTA-220ENST00000560998 SH2D2AQ9NP31 389 aa12.12□□□□□ -0.47
RABGGTA-220ENST00000560998 DECR2Q9NUI1 292 aa12.12□□□□□ -0.47
RABGGTA-220ENST00000560998 AK3Q9UIJ7 227 aa12.12□□□□□ -0.47
RABGGTA-220ENST00000560998 MRPS28Q9Y2Q9 187 aaKnown RBP12.12□□□□□ -0.47
RABGGTA-220ENST00000560998 LIPGQ9Y5X9 500 aa12.12□□□□□ -0.47
RABGGTA-220ENST00000560998 MED12Q93074 2177 aa12.11□□□□□ -0.47
RABGGTA-220ENST00000560998 KIR2DL5BA0A0G2JN68 375 aa12.11□□□□□ -0.47
RABGGTA-220ENST00000560998 KIR2DL5BA0A0G2JPC4 375 aa12.11□□□□□ -0.47
RABGGTA-220ENST00000560998 A0A1B0GU03 582 aa12.11□□□□□ -0.47
RABGGTA-220ENST00000560998 ZNF705GA8MUZ8 300 aaPredicted RBP12.11□□□□□ -0.47
RABGGTA-220ENST00000560998 SOCS1O15524 211 aa12.11□□□□□ -0.47
RABGGTA-220ENST00000560998 HSPA12AO43301 675 aa12.11□□□□□ -0.47
RABGGTA-220ENST00000560998 CRTAPO75718 401 aaPredicted RBP12.11□□□□□ -0.47
RABGGTA-220ENST00000560998 RAD51DO75771 328 aa12.11□□□□□ -0.47
RABGGTA-220ENST00000560998 MPIG6BO95866 241 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms