RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 PRR14LQ5THK1 2151 aa2.56□□□□□ -2
SYNE2-210ENST00000553455 TRAV8-3A0A0A6YYJ7 113 aa2.55□□□□□ -2
SYNE2-210ENST00000553455 IGHV3-21A0A0B4J1V1 117 aa2.55□□□□□ -2
SYNE2-210ENST00000553455 A0A1W2PNN7 141 aa2.55□□□□□ -2
SYNE2-210ENST00000553455 C4orf51C9J302 202 aa2.55□□□□□ -2
SYNE2-210ENST00000553455 H3BQ85 93 aa2.55□□□□□ -2
SYNE2-210ENST00000553455 M0QXV9 152 aa2.55□□□□□ -2
SYNE2-210ENST00000553455 SGCEO43556 437 aa2.55□□□□□ -2
SYNE2-210ENST00000553455 PDCD6O75340 191 aa2.55□□□□□ -2
SYNE2-210ENST00000553455 CGB3P0DN86 165 aa2.55□□□□□ -2
SYNE2-210ENST00000553455 CGB7P0DN87 165 aa2.55□□□□□ -2
SYNE2-210ENST00000553455 TGFBR2P37173 567 aa2.55□□□□□ -2
SYNE2-210ENST00000553455 OR2B6P58173 313 aa2.55□□□□□ -2
SYNE2-210ENST00000553455 OR10A3P58181 314 aa2.55□□□□□ -2
SYNE2-210ENST00000553455 HBG1P69891 147 aa2.55□□□□□ -2
SYNE2-210ENST00000553455 HBG2P69892 147 aa2.55□□□□□ -2
SYNE2-210ENST00000553455 PRDX1Q06830 199 aaKnown RBP2.55□□□□□ -2
SYNE2-210ENST00000553455 BAMBIQ13145 260 aa2.55□□□□□ -2
SYNE2-210ENST00000553455 NID2Q14112 1375 aa2.55□□□□□ -2
SYNE2-210ENST00000553455 TTMPQ5BVD1 217 aa2.55□□□□□ -2
SYNE2-210ENST00000553455 ZNF660Q6AZW8 331 aaPredicted RBP2.55□□□□□ -2
SYNE2-210ENST00000553455 WDR59Q6PJI9 974 aa2.55□□□□□ -2
SYNE2-210ENST00000553455 ZIC4Q8N9L1 334 aa2.55□□□□□ -2
SYNE2-210ENST00000553455 TWIST2Q8WVJ9 160 aa2.55□□□□□ -2
SYNE2-210ENST00000553455 SERPINB11Q96P15 392 aa2.55□□□□□ -2
SYNE2-210ENST00000553455 ANAPC13Q9BS18 74 aa2.55□□□□□ -2
SYNE2-210ENST00000553455 TXNIPQ9H3M7 391 aa2.55□□□□□ -2
SYNE2-210ENST00000553455 ZNF586Q9NXT0 402 aa2.55□□□□□ -2
SYNE2-210ENST00000553455 VWA8A3KMH1 1905 aa2.54□□□□□ -2
SYNE2-210ENST00000553455 A0A1B0GX12 115 aa2.54□□□□□ -2
SYNE2-210ENST00000553455 UBDO15205 165 aa2.54□□□□□ -2
SYNE2-210ENST00000553455 KLHL2O95198 593 aa2.54□□□□□ -2
SYNE2-210ENST00000553455 GP1BAP07359 652 aa2.54□□□□□ -2
SYNE2-210ENST00000553455 SLC35E2BP0CK96 405 aa2.54□□□□□ -2
SYNE2-210ENST00000553455 SCGB1C2P0DMR2 95 aa2.54□□□□□ -2
SYNE2-210ENST00000553455 SLC2A1P11166 492 aa2.54□□□□□ -2
SYNE2-210ENST00000553455 NQO2P16083 231 aa2.54□□□□□ -2
SYNE2-210ENST00000553455 CNTFRP26992 372 aa2.54□□□□□ -2
SYNE2-210ENST00000553455 ELK4P28324 431 aa2.54□□□□□ -2
SYNE2-210ENST00000553455 KLF3P57682 345 aaPredicted RBP2.54□□□□□ -2
SYNE2-210ENST00000553455 SLC9A3R2Q15599 337 aa2.54□□□□□ -2
SYNE2-210ENST00000553455 PDZD11Q5EBL8 140 aa2.54□□□□□ -2
SYNE2-210ENST00000553455 GATD1Q8NB37 220 aa2.54□□□□□ -2
SYNE2-210ENST00000553455 SCGB1C1Q8TD33 95 aa2.54□□□□□ -2
SYNE2-210ENST00000553455 OLFM3Q96PB7 478 aa2.54□□□□□ -2
SYNE2-210ENST00000553455 ACBD6Q9BR61 282 aa2.54□□□□□ -2
SYNE2-210ENST00000553455 METTL8Q9H825 291 aaKnown RBP2.54□□□□□ -2
SYNE2-210ENST00000553455 C14orf166Q9Y224 244 aaKnown RBP2.54□□□□□ -2
SYNE2-210ENST00000553455 ICOSQ9Y6W8 199 aa2.54□□□□□ -2
SYNE2-210ENST00000553455 BICRAQ9NZM4 1560 aa2.53□□□□□ -2
SYNE2-210ENST00000553455 IGKV2-24A0A0C4DH68 120 aa2.53□□□□□ -2
SYNE2-210ENST00000553455 ERICH4A6NGS2 130 aa2.53□□□□□ -2
SYNE2-210ENST00000553455 ZNF729A6NN14 1252 aaPredicted RBP2.53□□□□□ -2
SYNE2-210ENST00000553455 A8MWP4 228 aa2.53□□□□□ -2
SYNE2-210ENST00000553455 F5H5P2 479 aa2.53□□□□□ -2
SYNE2-210ENST00000553455 M0QX08 132 aa2.53□□□□□ -2
SYNE2-210ENST00000553455 TCF21O43680 179 aa2.53□□□□□ -2
SYNE2-210ENST00000553455 NEMFO60524 1076 aa2.53□□□□□ -2
SYNE2-210ENST00000553455 GTF2F2P13984 249 aa2.53□□□□□ -2
SYNE2-210ENST00000553455 CD34P28906 385 aa2.53□□□□□ -2
SYNE2-210ENST00000553455 MAGEA6P43360 314 aa2.53□□□□□ -2
SYNE2-210ENST00000553455 PRKCDQ05655 676 aa2.53□□□□□ -2
SYNE2-210ENST00000553455 BIKQ13323 160 aa2.53□□□□□ -2
SYNE2-210ENST00000553455 XRCC4Q13426 336 aa2.53□□□□□ -2
SYNE2-210ENST00000553455 OR10J3Q5JRS4 329 aa2.53□□□□□ -2
SYNE2-210ENST00000553455 LAMTOR1Q6IAA8 161 aa2.53□□□□□ -2
SYNE2-210ENST00000553455 MRPL52Q86TS9 123 aaKnown RBP2.53□□□□□ -2
SYNE2-210ENST00000553455 ZNF664Q8N3J9 261 aa2.53□□□□□ -2
SYNE2-210ENST00000553455 ACBD4Q8NC06 268 aa2.53□□□□□ -2
SYNE2-210ENST00000553455 ACTL9Q8TC94 416 aa2.53□□□□□ -2
SYNE2-210ENST00000553455 IFT81Q8WYA0 676 aa2.53□□□□□ -2
SYNE2-210ENST00000553455 RORBQ92753 470 aa2.53□□□□□ -2
SYNE2-210ENST00000553455 MAL2Q969L2 176 aa2.53□□□□□ -2
SYNE2-210ENST00000553455 APOL4Q9BPW4 351 aa2.53□□□□□ -2
SYNE2-210ENST00000553455 OR52A5Q9H2C5 316 aa2.53□□□□□ -2
SYNE2-210ENST00000553455 TAS2R13Q9NYV9 303 aa2.53□□□□□ -2
SYNE2-210ENST00000553455 CHMP5Q9NZZ3 219 aa2.53□□□□□ -2
SYNE2-210ENST00000553455 ZNF391Q9UJN7 358 aa2.53□□□□□ -2
SYNE2-210ENST00000553455 IGHV2-26A0A0B4J1V2 119 aa2.52□□□□□ -2.01
SYNE2-210ENST00000553455 HSBP1L1C9JCN9 74 aa2.52□□□□□ -2.01
SYNE2-210ENST00000553455 C15orf65H3BRN8 121 aa2.52□□□□□ -2.01
SYNE2-210ENST00000553455 K7ERS5 55 aa2.52□□□□□ -2.01
SYNE2-210ENST00000553455 FABP7O15540 132 aa2.52□□□□□ -2.01
SYNE2-210ENST00000553455 NPPAP01160 153 aa2.52□□□□□ -2.01
SYNE2-210ENST00000553455 IGKV1D-33P01593 117 aa2.52□□□□□ -2.01
SYNE2-210ENST00000553455 IGKV1-33P01594 117 aa2.52□□□□□ -2.01
SYNE2-210ENST00000553455 P0C880 135 aa2.52□□□□□ -2.01
SYNE2-210ENST00000553455 SPAM1P38567 509 aa2.52□□□□□ -2.01
SYNE2-210ENST00000553455 ZNF83P51522 516 aa2.52□□□□□ -2.01
SYNE2-210ENST00000553455 OR4D1Q15615 310 aa2.52□□□□□ -2.01
SYNE2-210ENST00000553455 USF2Q15853 346 aaPredicted RBP2.52□□□□□ -2.01
SYNE2-210ENST00000553455 KRTAP25-1Q3LHN0 102 aa2.52□□□□□ -2.01
SYNE2-210ENST00000553455 NXNL2Q5VZ03 156 aa2.52□□□□□ -2.01
SYNE2-210ENST00000553455 DGAT2L6Q6ZPD8 337 aa2.52□□□□□ -2.01
SYNE2-210ENST00000553455 FAM183BPQ6ZVS7 135 aa2.52□□□□□ -2.01
SYNE2-210ENST00000553455 LRRC6Q86X45 466 aa2.52□□□□□ -2.01
SYNE2-210ENST00000553455 C10orf107Q8IVU9 208 aa2.52□□□□□ -2.01
SYNE2-210ENST00000553455 SLC25A45Q8N413 288 aa2.52□□□□□ -2.01
SYNE2-210ENST00000553455 FAM45AQ8TCE6 357 aa2.52□□□□□ -2.01
SYNE2-210ENST00000553455 OTUB2Q96DC9 234 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms