RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 GDNFP39905 211 aa13.47□□□□□ -0.25
CPSF1-207ENST00000531727 PTGFRP43088 359 aa13.47□□□□□ -0.25
CPSF1-207ENST00000531727 ARHGDIBP52566 201 aa13.47□□□□□ -0.25
CPSF1-207ENST00000531727 KPNB1Q14974 876 aaKnown RBP13.47□□□□□ -0.25
CPSF1-207ENST00000531727 FBLN7Q53RD9 439 aa13.47□□□□□ -0.25
CPSF1-207ENST00000531727 OXLD1Q5BKU9 147 aa13.47□□□□□ -0.25
CPSF1-207ENST00000531727 KRBOX4Q5JUW0 171 aa13.47□□□□□ -0.25
CPSF1-207ENST00000531727 ZFP1Q6P2D0 407 aa13.47□□□□□ -0.25
CPSF1-207ENST00000531727 SYS1Q8N2H4 156 aa13.47□□□□□ -0.25
CPSF1-207ENST00000531727 CBR4Q8N4T8 237 aa13.47□□□□□ -0.25
CPSF1-207ENST00000531727 COQ2Q96H96 371 aa13.47□□□□□ -0.25
CPSF1-207ENST00000531727 AKR1E2Q96JD6 320 aa13.47□□□□□ -0.25
CPSF1-207ENST00000531727 ALG8Q9BVK2 526 aa13.47□□□□□ -0.25
CPSF1-207ENST00000531727 ZNF286AQ9HBT8 521 aa13.47□□□□□ -0.25
CPSF1-207ENST00000531727 AASSQ9UDR5 926 aa13.47□□□□□ -0.25
CPSF1-207ENST00000531727 MYRFQ9Y2G1 1151 aa13.47□□□□□ -0.25
CPSF1-207ENST00000531727 GMPPBQ9Y5P6 360 aa13.47□□□□□ -0.25
CPSF1-207ENST00000531727 FAM172BPA6NC97 362 aa13.46□□□□□ -0.25
CPSF1-207ENST00000531727 SLC33A1O00400 549 aaPredicted RBP13.46□□□□□ -0.25
CPSF1-207ENST00000531727 ALX3O95076 343 aa13.46□□□□□ -0.25
CPSF1-207ENST00000531727 PRB2P02812 416 aaPredicted RBP13.46□□□□□ -0.25
CPSF1-207ENST00000531727 HCKP08631 526 aa13.46□□□□□ -0.25
CPSF1-207ENST00000531727 RPSAP08865 295 aaKnown RBP13.46□□□□□ -0.25
CPSF1-207ENST00000531727 DBTP11182 482 aaKnown RBP13.46□□□□□ -0.25
CPSF1-207ENST00000531727 GABRB1P18505 474 aa13.46□□□□□ -0.25
CPSF1-207ENST00000531727 CD24P25063 80 aa13.46□□□□□ -0.25
CPSF1-207ENST00000531727 ZP1P60852 638 aa13.46□□□□□ -0.25
CPSF1-207ENST00000531727 CDK5R1Q15078 307 aa13.46□□□□□ -0.25
CPSF1-207ENST00000531727 KISS1Q15726 138 aa13.46□□□□□ -0.25
CPSF1-207ENST00000531727 Q6ZPA2 131 aa13.46□□□□□ -0.25
CPSF1-207ENST00000531727 SERPINA12Q8IW75 414 aa13.46□□□□□ -0.25
CPSF1-207ENST00000531727 OR5AU1Q8NGC0 362 aa13.46□□□□□ -0.25
CPSF1-207ENST00000531727 OR5D14Q8NGL3 314 aa13.46□□□□□ -0.25
CPSF1-207ENST00000531727 STMN2Q93045 179 aa13.46□□□□□ -0.25
CPSF1-207ENST00000531727 CREB3L1Q96BA8 519 aa13.46□□□□□ -0.25
CPSF1-207ENST00000531727 ISG20L2Q9H9L3 353 aaKnown RBP13.46□□□□□ -0.25
CPSF1-207ENST00000531727 TMEM212A6NML5 194 aa13.45□□□□□ -0.26
CPSF1-207ENST00000531727 ZNF729A6NN14 1252 aaPredicted RBP13.45□□□□□ -0.26
CPSF1-207ENST00000531727 TOR1AO14656 332 aa13.45□□□□□ -0.26
CPSF1-207ENST00000531727 DEGS1O15121 323 aa13.45□□□□□ -0.26
CPSF1-207ENST00000531727 SULT1B1O43704 296 aa13.45□□□□□ -0.26
CPSF1-207ENST00000531727 ZFPL1O95159 310 aa13.45□□□□□ -0.26
CPSF1-207ENST00000531727 TMEM225BP0DP42 221 aa13.45□□□□□ -0.26
CPSF1-207ENST00000531727 CEACAM3P40198 252 aa13.45□□□□□ -0.26
CPSF1-207ENST00000531727 MTNR1BP49286 362 aa13.45□□□□□ -0.26
CPSF1-207ENST00000531727 CD83Q01151 205 aa13.45□□□□□ -0.26
CPSF1-207ENST00000531727 MRPL28Q13084 256 aaKnown RBP13.45□□□□□ -0.26
CPSF1-207ENST00000531727 ATXN7L3Q14CW9 347 aaPredicted RBP13.45□□□□□ -0.26
CPSF1-207ENST00000531727 C17orf58Q2M2W7 97 aa13.45□□□□□ -0.26
CPSF1-207ENST00000531727 HLA-DRB5Q30154 266 aa13.45□□□□□ -0.26
CPSF1-207ENST00000531727 ZNF691Q5VV52 312 aa13.45□□□□□ -0.26
CPSF1-207ENST00000531727 PARP16Q8N5Y8 322 aa13.45□□□□□ -0.26
CPSF1-207ENST00000531727 OR4D6Q8NGJ1 314 aa13.45□□□□□ -0.26
CPSF1-207ENST00000531727 CAPSLQ8WWF8 208 aa13.45□□□□□ -0.26
CPSF1-207ENST00000531727 ZNF649Q9BS31 505 aa13.45□□□□□ -0.26
CPSF1-207ENST00000531727 SLC25A33Q9BSK2 321 aa13.45□□□□□ -0.26
CPSF1-207ENST00000531727 PPIL3Q9H2H8 161 aaKnown RBP13.45□□□□□ -0.26
CPSF1-207ENST00000531727 INPP5EQ9NRR6 644 aa13.45□□□□□ -0.26
CPSF1-207ENST00000531727 ING3Q9NXR8 418 aa13.45□□□□□ -0.26
CPSF1-207ENST00000531727 OR6C3Q9NZP0 311 aa13.45□□□□□ -0.26
CPSF1-207ENST00000531727 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.45□□□□□ -0.26
CPSF1-207ENST00000531727 A0A087X0M5 115 aa13.44□□□□□ -0.26
CPSF1-207ENST00000531727 A0A1B0GX30 115 aa13.44□□□□□ -0.26
CPSF1-207ENST00000531727 LY6LH3BQJ8 138 aa13.44□□□□□ -0.26
CPSF1-207ENST00000531727 BUB1B-PAK6H3BSN5 160 aa13.44□□□□□ -0.26
CPSF1-207ENST00000531727 MPZL2O60487 215 aa13.44□□□□□ -0.26
CPSF1-207ENST00000531727 OR2F2O95006 317 aa13.44□□□□□ -0.26
CPSF1-207ENST00000531727 FADS2O95864 444 aaKnown RBP13.44□□□□□ -0.26
CPSF1-207ENST00000531727 CCDC159P0C7I6 412 aa13.44□□□□□ -0.26
CPSF1-207ENST00000531727 PRRX1P54821 245 aa13.44□□□□□ -0.26
CPSF1-207ENST00000531727 RAB40BQ12829 278 aa13.44□□□□□ -0.26
CPSF1-207ENST00000531727 TPTE2P1Q5T6R2 138 aa13.44□□□□□ -0.26
CPSF1-207ENST00000531727 OR5AK2Q8NH90 309 aa13.44□□□□□ -0.26
CPSF1-207ENST00000531727 RHOXF1Q8NHV9 184 aa13.44□□□□□ -0.26
CPSF1-207ENST00000531727 Q96MT0 163 aa13.44□□□□□ -0.26
CPSF1-207ENST00000531727 RBM14Q96PK6 669 aaKnown RBP13.44□□□□□ -0.26
CPSF1-207ENST00000531727 ERVK13-1Q9NX77 482 aa13.44□□□□□ -0.26
CPSF1-207ENST00000531727 DHDHQ9UQ10 334 aa13.44□□□□□ -0.26
CPSF1-207ENST00000531727 A0A1W2PRX2 142 aa13.43□□□□□ -0.26
CPSF1-207ENST00000531727 E9PI62 339 aa13.43□□□□□ -0.26
CPSF1-207ENST00000531727 PIN1P1O15428 100 aa13.43□□□□□ -0.26
CPSF1-207ENST00000531727 GBX2P52951 348 aaPredicted RBP13.43□□□□□ -0.26
CPSF1-207ENST00000531727 ABCA11PQ4W5N1 156 aa13.43□□□□□ -0.26
CPSF1-207ENST00000531727 ELP2Q6IA86 826 aa13.43□□□□□ -0.26
CPSF1-207ENST00000531727 CCDC144NLQ6NUI1 221 aa13.43□□□□□ -0.26
CPSF1-207ENST00000531727 CENPVQ7Z7K6 275 aaPredicted RBP13.43□□□□□ -0.26
CPSF1-207ENST00000531727 PXT1Q8NFP0 134 aa13.43□□□□□ -0.26
CPSF1-207ENST00000531727 OR51T1Q8NGJ9 327 aa13.43□□□□□ -0.26
CPSF1-207ENST00000531727 TSEN15Q8WW01 171 aaKnown RBP13.43□□□□□ -0.26
CPSF1-207ENST00000531727 PHF21AQ96BD5 680 aa13.43□□□□□ -0.26
CPSF1-207ENST00000531727 CPNE2Q96FN4 548 aaPredicted RBP13.43□□□□□ -0.26
CPSF1-207ENST00000531727 PDCD1LG2Q9BQ51 273 aa13.43□□□□□ -0.26
CPSF1-207ENST00000531727 C9orf16Q9BUW7 83 aa13.43□□□□□ -0.26
CPSF1-207ENST00000531727 AMBNQ9NP70 447 aa13.43□□□□□ -0.26
CPSF1-207ENST00000531727 NECAP2Q9NVZ3 263 aa13.43□□□□□ -0.26
CPSF1-207ENST00000531727 KIAA2026Q5HYC2 2103 aa13.42□□□□□ -0.26
CPSF1-207ENST00000531727 KBTBD11-OT1A0A1B0GTJ5 212 aa13.42□□□□□ -0.26
CPSF1-207ENST00000531727 OOSP1A8MZH6 123 aa13.42□□□□□ -0.26
CPSF1-207ENST00000531727 H0YJX3 145 aa13.42□□□□□ -0.26
CPSF1-207ENST00000531727 HSPB6O14558 160 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms