RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 OC90Q02509 493 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 ST3GAL4Q11206 333 aa3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 MEF2DQ14814 521 aa3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 UPP1Q16831 310 aa3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 IAH1Q2TAA2 248 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 ALKBH6Q3KRA9 238 aa3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 TTLL9Q3SXZ7 439 aa3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 ZNF658BQ4V348 819 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 PDZD11Q5EBL8 140 aa3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 VWA2Q5GFL6 755 aa3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 CST9LP1Q5W188 147 aa3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 ACSM2BQ68CK6 577 aa3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 GLT8D1Q68CQ7 371 aa3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 ZNF776Q68DI1 518 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 TEX38Q6PEX7 206 aa3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 FA2HQ7L5A8 372 aa3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 NFE4Q86UQ8 179 aa3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 CMTM1Q8IZ96 169 aa3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 SLC39A11Q8N1S5 342 aa3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 FAM71E2Q8N5Q1 922 aa3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 TCTEX1D1Q8N7M0 179 aa3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 FADS6Q8N9I5 356 aa3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 INO80EQ8NBZ0 244 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 SLC26A10Q8NG04 563 aa3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 OR2Z1Q8NG97 314 aa3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 OR52L1Q8NGH7 329 aa3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 OR13A1Q8NGR1 328 aa3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 OR6N1Q8NGY5 312 aa3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 OLIG1Q8TAK6 271 aa3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 SFXN5Q8TD22 340 aa3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 TMEM255BQ8WV15 326 aa3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 ZNF689Q96CS4 500 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 MUCL1Q96DR8 90 aa3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 YPEL4Q96NS1 127 aa3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 IMMP2LQ96T52 175 aa3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 GPR22Q99680 433 aa3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 MRPL57Q9BQC6 102 aaKnown RBP3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 FGFBP2Q9BYJ0 223 aa3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 LINC00470Q9BZP3 86 aa3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 UBE2ZQ9H832 354 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 PATZ1Q9HBE1 687 aaKnown RBP3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 NMRAL1Q9HBL8 299 aa3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 KCNJ16Q9NPI9 418 aa3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 PARP11Q9NR21 331 aa3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 AIG1Q9NVV5 245 aa3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 CLN6Q9NWW5 311 aa3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 MRPL16Q9NX20 251 aaKnown RBP3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 P2RX2Q9UBL9 471 aa3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 FBXL17Q9UF56 701 aa3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 SHPKQ9UHJ6 478 aa3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 KCNS2Q9ULS6 477 aa3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 TCF19Q9Y242 345 aa3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 LAMTOR2Q9Y2Q5 125 aa3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 MRPS16Q9Y3D3 137 aaKnown RBP3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 PTRH2Q9Y3E5 179 aaKnown RBP3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 A0A0G2JMZ2 1700 aa3.97□□□□□ -1.77
HMGB3P13-201ENST00000511263 SMCHD1A6NHR9 2005 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 A0A1W2PR80 420 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 HIDE1A8MVS5 230 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 RAB29O14966 203 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 ARPC1BO15143 372 aaKnown RBP3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 SIVA1O15304 175 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 LMX1BO60663 402 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 ENTPD6O75354 484 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 CSO75390 466 aaKnown RBP3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 SEMA4FO95754 770 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 TMEM50AO95807 157 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 CD8AP01732 235 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 IGHG4P01861 327 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 HBZP02008 142 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 C1QAP02745 245 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 CD74P04233 296 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 HLA-DPB1P04440 258 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 PRSS1P07477 247 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 CTSLP07711 333 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 TRGC1P0CF51 173 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 FAM106CPP0CH98 169 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 MPC1LP0DKB6 136 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 CEACAM1P13688 526 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 EPCAMP16422 314 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 ACHEP22303 614 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 ELAVL4P26378 380 aaKnown RBP3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 HTR1FP30939 366 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 GABRA5P31644 462 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 GPR6P46095 362 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 RPL34P49207 117 aaKnown RBP3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 ATP5J2P56134 94 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 RPL24P83731 157 aaKnown RBP3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 SSX1Q16384 188 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 LRRC10Q5BKY1 277 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 OLFML2AQ68BL7 652 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 PMS2CLQ68D20 193 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 SLC8B1Q6J4K2 584 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 WDR82Q6UXN9 313 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 TEX43Q6ZNM6 134 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 CPEB2Q7Z5Q1 589 aaKnown RBP3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 TMPRSS11BQ86T26 416 aa3.96□□□□□ -1.78
HMGB3P13-201ENST00000511263 DOLPP1Q86YN1 238 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms