RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 LIPEQ05469 1076 aa10.44□□□□□ -0.74
EXOSC3-207ENST00000490516 COQ5Q5HYK3 327 aa10.44□□□□□ -0.74
EXOSC3-207ENST00000490516 OR2T10Q8NGZ9 312 aa10.44□□□□□ -0.74
EXOSC3-207ENST00000490516 MNTQ99583 582 aa10.44□□□□□ -0.74
EXOSC3-207ENST00000490516 CHCHD6Q9BRQ6 235 aa10.44□□□□□ -0.74
EXOSC3-207ENST00000490516 THAP7Q9BT49 309 aaPredicted RBP10.44□□□□□ -0.74
EXOSC3-207ENST00000490516 ELOVL1Q9BW60 279 aa10.44□□□□□ -0.74
EXOSC3-207ENST00000490516 PBOV1Q9GZY1 135 aa10.44□□□□□ -0.74
EXOSC3-207ENST00000490516 PLEKHA3Q9HB20 300 aa10.44□□□□□ -0.74
EXOSC3-207ENST00000490516 SEBOXQ9HB31 216 aaPredicted RBP10.44□□□□□ -0.74
EXOSC3-207ENST00000490516 RBFOX1Q9NWB1 397 aaKnown RBP10.44□□□□□ -0.74
EXOSC3-207ENST00000490516 CHCHD3Q9NX63 227 aaKnown RBP10.44□□□□□ -0.74
EXOSC3-207ENST00000490516 ZNF580Q9UK33 172 aa10.44□□□□□ -0.74
EXOSC3-207ENST00000490516 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.44□□□□□ -0.74
EXOSC3-207ENST00000490516 PSG11Q9UQ72 335 aa10.44□□□□□ -0.74
EXOSC3-207ENST00000490516 TMEM269A0A1B0GVZ9 245 aa10.43□□□□□ -0.74
EXOSC3-207ENST00000490516 A0A1W2PPE3 182 aa10.43□□□□□ -0.74
EXOSC3-207ENST00000490516 ODAMA1E959 279 aa10.43□□□□□ -0.74
EXOSC3-207ENST00000490516 HSD17B6O14756 317 aa10.43□□□□□ -0.74
EXOSC3-207ENST00000490516 F2RL1P55085 397 aa10.43□□□□□ -0.74
EXOSC3-207ENST00000490516 LGALS9CQ6DKI2 356 aa10.43□□□□□ -0.74
EXOSC3-207ENST00000490516 RPL13AP3Q6NVV1 102 aa10.43□□□□□ -0.74
EXOSC3-207ENST00000490516 SLC25A26Q70HW3 274 aa10.43□□□□□ -0.74
EXOSC3-207ENST00000490516 GTSCR1Q86UQ5 136 aa10.43□□□□□ -0.74
EXOSC3-207ENST00000490516 IZUMO1Q8IYV9 350 aa10.43□□□□□ -0.74
EXOSC3-207ENST00000490516 HAVCR2Q8TDQ0 301 aa10.43□□□□□ -0.74
EXOSC3-207ENST00000490516 OTULINQ96BN8 352 aa10.43□□□□□ -0.74
EXOSC3-207ENST00000490516 TSSK6Q9BXA6 273 aa10.43□□□□□ -0.74
EXOSC3-207ENST00000490516 GID8Q9NWU2 228 aa10.43□□□□□ -0.74
EXOSC3-207ENST00000490516 IL20Q9NYY1 176 aa10.43□□□□□ -0.74
EXOSC3-207ENST00000490516 VPS13DQ5THJ4 4388 aa10.42□□□□□ -0.74
EXOSC3-207ENST00000490516 ZNF729A6NN14 1252 aaPredicted RBP10.42□□□□□ -0.74
EXOSC3-207ENST00000490516 ENTPD6O75354 484 aa10.42□□□□□ -0.74
EXOSC3-207ENST00000490516 LGALS1P09382 135 aaKnown RBP10.42□□□□□ -0.74
EXOSC3-207ENST00000490516 IFNGR2P38484 337 aa10.42□□□□□ -0.74
EXOSC3-207ENST00000490516 NPBWR2P48146 333 aa10.42□□□□□ -0.74
EXOSC3-207ENST00000490516 SMIM11AP58511 58 aa10.42□□□□□ -0.74
EXOSC3-207ENST00000490516 EWSR1Q01844 656 aaKnown RBP eCLIP10.42□□□□□ -0.74
EXOSC3-207ENST00000490516 LTC4SQ16873 150 aa10.42□□□□□ -0.74
EXOSC3-207ENST00000490516 SLC15A3Q8IY34 581 aa10.42□□□□□ -0.74
EXOSC3-207ENST00000490516 ENTHD1Q8IYW4 607 aa10.42□□□□□ -0.74
EXOSC3-207ENST00000490516 RP9Q8TA86 221 aaKnown RBP10.42□□□□□ -0.74
EXOSC3-207ENST00000490516 CASTOR1Q8WTX7 329 aa10.42□□□□□ -0.74
EXOSC3-207ENST00000490516 COQ2Q96H96 371 aa10.42□□□□□ -0.74
EXOSC3-207ENST00000490516 ZNF107Q9UII5 783 aaPredicted RBP10.42□□□□□ -0.74
EXOSC3-207ENST00000490516 MRPS28Q9Y2Q9 187 aaKnown RBP10.42□□□□□ -0.74
EXOSC3-207ENST00000490516 KBTBD11-OT1A0A1B0GTJ5 212 aa10.41□□□□□ -0.74
EXOSC3-207ENST00000490516 SHISA3A0PJX4 238 aa10.41□□□□□ -0.74
EXOSC3-207ENST00000490516 FUOMA2VDF0 154 aa10.41□□□□□ -0.74
EXOSC3-207ENST00000490516 FAM90A10PA6NDY2 464 aa10.41□□□□□ -0.74
EXOSC3-207ENST00000490516 ACOD1A6NK06 481 aa10.41□□□□□ -0.74
EXOSC3-207ENST00000490516 BBIP1A8MTZ0 92 aa10.41□□□□□ -0.74
EXOSC3-207ENST00000490516 ZNF736B4DX44 427 aaPredicted RBP10.41□□□□□ -0.74
EXOSC3-207ENST00000490516 OR2H2O95918 312 aa10.41□□□□□ -0.74
EXOSC3-207ENST00000490516 SLC2A2P11168 524 aaPredicted RBP10.41□□□□□ -0.74
EXOSC3-207ENST00000490516 BCL3P20749 454 aa10.41□□□□□ -0.74
EXOSC3-207ENST00000490516 HCCSP53701 268 aa10.41□□□□□ -0.74
EXOSC3-207ENST00000490516 PRR20EP86478 221 aa10.41□□□□□ -0.74
EXOSC3-207ENST00000490516 PRR20CP86479 221 aa10.41□□□□□ -0.74
EXOSC3-207ENST00000490516 PRR20DP86480 221 aa10.41□□□□□ -0.74
EXOSC3-207ENST00000490516 PRR20BP86481 221 aa10.41□□□□□ -0.74
EXOSC3-207ENST00000490516 PRR20AP86496 221 aa10.41□□□□□ -0.74
EXOSC3-207ENST00000490516 MFGE8Q08431 387 aaPredicted RBP10.41□□□□□ -0.74
EXOSC3-207ENST00000490516 ZNF816Q0VGE8 651 aaPredicted RBP10.41□□□□□ -0.74
EXOSC3-207ENST00000490516 ZNF146Q15072 292 aa10.41□□□□□ -0.74
EXOSC3-207ENST00000490516 FAM58AQ8N1B3 248 aa10.41□□□□□ -0.74
EXOSC3-207ENST00000490516 ZNF454Q8N9F8 522 aa10.41□□□□□ -0.74
EXOSC3-207ENST00000490516 OR10X1Q8NGY0 326 aa10.41□□□□□ -0.74
EXOSC3-207ENST00000490516 STON2Q8WXE9 905 aa10.41□□□□□ -0.74
EXOSC3-207ENST00000490516 PPIL3Q9H2H8 161 aaKnown RBP10.41□□□□□ -0.74
EXOSC3-207ENST00000490516 PLA2G2EQ9NZK7 142 aa10.41□□□□□ -0.74
EXOSC3-207ENST00000490516 OR6C3Q9NZP0 311 aa10.41□□□□□ -0.74
EXOSC3-207ENST00000490516 V9GYS6 101 aa10.41□□□□□ -0.74
EXOSC3-207ENST00000490516 A0A1B0GVY2 172 aa10.4□□□□□ -0.74
EXOSC3-207ENST00000490516 RIIAD1A6NNX1 92 aa10.4□□□□□ -0.74
EXOSC3-207ENST00000490516 NME4O00746 187 aa10.4□□□□□ -0.74
EXOSC3-207ENST00000490516 ATP6V0E1O15342 81 aa10.4□□□□□ -0.74
EXOSC3-207ENST00000490516 RGS11O94810 467 aa10.4□□□□□ -0.74
EXOSC3-207ENST00000490516 MOSP00540 346 aa10.4□□□□□ -0.74
EXOSC3-207ENST00000490516 IGHV3-11P01762 117 aa10.4□□□□□ -0.74
EXOSC3-207ENST00000490516 TTRP02766 147 aa10.4□□□□□ -0.74
EXOSC3-207ENST00000490516 GAPDHP04406 335 aaKnown RBP10.4□□□□□ -0.74
EXOSC3-207ENST00000490516 CGB3P0DN86 165 aa10.4□□□□□ -0.74
EXOSC3-207ENST00000490516 CGB7P0DN87 165 aa10.4□□□□□ -0.74
EXOSC3-207ENST00000490516 PRKACAP17612 351 aa10.4□□□□□ -0.74
EXOSC3-207ENST00000490516 CDC42P60953 191 aa10.4□□□□□ -0.74
EXOSC3-207ENST00000490516 BNIP1Q12981 228 aa10.4□□□□□ -0.74
EXOSC3-207ENST00000490516 KRBOX4Q5JUW0 171 aa10.4□□□□□ -0.74
EXOSC3-207ENST00000490516 CROCCP2Q86T23 111 aa10.4□□□□□ -0.74
EXOSC3-207ENST00000490516 OR9Q2Q8NGE9 314 aa10.4□□□□□ -0.74
EXOSC3-207ENST00000490516 OR14K1Q8NGZ2 314 aa10.4□□□□□ -0.74
EXOSC3-207ENST00000490516 OR51V1Q9H2C8 321 aa10.4□□□□□ -0.74
EXOSC3-207ENST00000490516 ARMC1Q9NVT9 282 aa10.4□□□□□ -0.74
EXOSC3-207ENST00000490516 SIGLEC8Q9NYZ4 499 aa10.4□□□□□ -0.74
EXOSC3-207ENST00000490516 KLK5Q9Y337 293 aaPredicted RBP10.4□□□□□ -0.74
EXOSC3-207ENST00000490516 V9GYQ6 96 aa10.4□□□□□ -0.74
EXOSC3-207ENST00000490516 TRAV41A0A0B4J266 112 aa10.39□□□□□ -0.75
EXOSC3-207ENST00000490516 TRBV2A0A0J9YWF9 115 aa10.39□□□□□ -0.75
EXOSC3-207ENST00000490516 IZUMO1RA6ND01 250 aa10.39□□□□□ -0.75
EXOSC3-207ENST00000490516 H0Y980 276 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms