RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 MAPK3P27361 379 aaPredicted RBP7.43□□□□□ -1.22
HDAC6-232ENST00000489053 ERP29P30040 261 aaKnown RBP7.43□□□□□ -1.22
HDAC6-232ENST00000489053 BDKRB2P30411 391 aa7.43□□□□□ -1.22
HDAC6-232ENST00000489053 ZNF93P35789 620 aaPredicted RBP7.43□□□□□ -1.22
HDAC6-232ENST00000489053 GLP1RP43220 463 aa7.43□□□□□ -1.22
HDAC6-232ENST00000489053 OR3A1P47881 315 aa7.43□□□□□ -1.22
HDAC6-232ENST00000489053 AESQ08117 197 aa7.43□□□□□ -1.22
HDAC6-232ENST00000489053 ATXN7L3Q14CW9 347 aaPredicted RBP7.43□□□□□ -1.22
HDAC6-232ENST00000489053 YIF1BQ5BJH7 314 aa7.43□□□□□ -1.22
HDAC6-232ENST00000489053 AHSA2Q719I0 299 aa7.43□□□□□ -1.22
HDAC6-232ENST00000489053 ZNF565Q8N9K5 539 aa7.43□□□□□ -1.22
HDAC6-232ENST00000489053 OR52N4Q8NGI2 321 aa7.43□□□□□ -1.22
HDAC6-232ENST00000489053 OR2T6Q8NHC8 308 aa7.43□□□□□ -1.22
HDAC6-232ENST00000489053 ZNF596Q8TC21 504 aa7.43□□□□□ -1.22
HDAC6-232ENST00000489053 WFDC12Q8WWY7 111 aa7.43□□□□□ -1.22
HDAC6-232ENST00000489053 GHSRQ92847 366 aa7.43□□□□□ -1.22
HDAC6-232ENST00000489053 RNF166Q96A37 237 aaPredicted RBP7.43□□□□□ -1.22
HDAC6-232ENST00000489053 CREB3L1Q96BA8 519 aa7.43□□□□□ -1.22
HDAC6-232ENST00000489053 MALSU1Q96EH3 234 aa7.43□□□□□ -1.22
HDAC6-232ENST00000489053 CLEC7AQ9BXN2 247 aa7.43□□□□□ -1.22
HDAC6-232ENST00000489053 TMEM133Q9H2Q1 129 aa7.43□□□□□ -1.22
HDAC6-232ENST00000489053 ZNF696Q9H7X3 374 aa7.43□□□□□ -1.22
HDAC6-232ENST00000489053 CNOT2Q9NZN8 540 aaKnown RBP7.43□□□□□ -1.22
HDAC6-232ENST00000489053 OR6C3Q9NZP0 311 aa7.43□□□□□ -1.22
HDAC6-232ENST00000489053 MEIKINA0A087WXM9 373 aa7.42□□□□□ -1.22
HDAC6-232ENST00000489053 IGHV2-26A0A0B4J1V2 119 aa7.42□□□□□ -1.22
HDAC6-232ENST00000489053 IGKV1-12A0A0C4DH73 117 aa7.42□□□□□ -1.22
HDAC6-232ENST00000489053 ODAMA1E959 279 aa7.42□□□□□ -1.22
HDAC6-232ENST00000489053 GABRPO00591 440 aa7.42□□□□□ -1.22
HDAC6-232ENST00000489053 ZNF780AO75290 641 aaPredicted RBP7.42□□□□□ -1.22
HDAC6-232ENST00000489053 OR7C1O76099 320 aaPredicted RBP7.42□□□□□ -1.22
HDAC6-232ENST00000489053 IGKV1D-12P01611 117 aa7.42□□□□□ -1.22
HDAC6-232ENST00000489053 ALDOBP05062 364 aa7.42□□□□□ -1.22
HDAC6-232ENST00000489053 CDK2P24941 298 aa7.42□□□□□ -1.22
HDAC6-232ENST00000489053 NFYBP25208 207 aa7.42□□□□□ -1.22
HDAC6-232ENST00000489053 HTR1DP28221 377 aa7.42□□□□□ -1.22
HDAC6-232ENST00000489053 C21orf33P30042 268 aaPredicted RBP7.42□□□□□ -1.22
HDAC6-232ENST00000489053 BRS3P32247 399 aa7.42□□□□□ -1.22
HDAC6-232ENST00000489053 CEACAM3P40198 252 aa7.42□□□□□ -1.22
HDAC6-232ENST00000489053 PRRX1P54821 245 aa7.42□□□□□ -1.22
HDAC6-232ENST00000489053 ADARB1P78563 741 aaKnown RBP7.42□□□□□ -1.22
HDAC6-232ENST00000489053 RBM39Q14498 530 aaKnown RBP7.42□□□□□ -1.22
HDAC6-232ENST00000489053 IL13RA2Q14627 380 aa7.42□□□□□ -1.22
HDAC6-232ENST00000489053 Q499Y3 187 aa7.42□□□□□ -1.22
HDAC6-232ENST00000489053 OGFRL1Q5TC84 451 aaPredicted RBP7.42□□□□□ -1.22
HDAC6-232ENST00000489053 MINOS1Q5TGZ0 78 aa7.42□□□□□ -1.22
HDAC6-232ENST00000489053 PRAMEF5Q5TYX0 476 aa7.42□□□□□ -1.22
HDAC6-232ENST00000489053 ASPHD2Q6ICH7 369 aa7.42□□□□□ -1.22
HDAC6-232ENST00000489053 C11orf88Q6PI97 169 aa7.42□□□□□ -1.22
HDAC6-232ENST00000489053 TREML4Q6UXN2 200 aa7.42□□□□□ -1.22
HDAC6-232ENST00000489053 Q6ZSV7 163 aa7.42□□□□□ -1.22
HDAC6-232ENST00000489053 Q6ZTK2 550 aa7.42□□□□□ -1.22
HDAC6-232ENST00000489053 RTN4RL2Q86UN3 420 aa7.42□□□□□ -1.22
HDAC6-232ENST00000489053 ABHD12Q8N2K0 398 aa7.42□□□□□ -1.22
HDAC6-232ENST00000489053 JAGN1Q8N5M9 183 aa7.42□□□□□ -1.22
HDAC6-232ENST00000489053 ZFP41Q8N8Y5 198 aa7.42□□□□□ -1.22
HDAC6-232ENST00000489053 PXT1Q8NFP0 134 aa7.42□□□□□ -1.22
HDAC6-232ENST00000489053 OR10K1Q8NGX5 313 aa7.42□□□□□ -1.22
HDAC6-232ENST00000489053 LINC01006Q8NI28 216 aa7.42□□□□□ -1.22
HDAC6-232ENST00000489053 C17orf50Q8WW18 174 aa7.42□□□□□ -1.22
HDAC6-232ENST00000489053 GGHQ92820 318 aa7.42□□□□□ -1.22
HDAC6-232ENST00000489053 MYDGFQ969H8 173 aa7.42□□□□□ -1.22
HDAC6-232ENST00000489053 AKR1E2Q96JD6 320 aa7.42□□□□□ -1.22
HDAC6-232ENST00000489053 MEGF9Q9H1U4 602 aa7.42□□□□□ -1.22
HDAC6-232ENST00000489053 CLEC2DQ9UHP7 191 aa7.42□□□□□ -1.22
HDAC6-232ENST00000489053 HILPDAQ9Y5L2 63 aa7.42□□□□□ -1.22
HDAC6-232ENST00000489053 MINOS1-NBL1R4GNA1 71 aa7.42□□□□□ -1.22
HDAC6-232ENST00000489053 A0A0G2JK05 382 aa7.41□□□□□ -1.22
HDAC6-232ENST00000489053 ERICH4A6NGS2 130 aa7.41□□□□□ -1.22
HDAC6-232ENST00000489053 LEUTXA8MZ59 168 aa7.41□□□□□ -1.22
HDAC6-232ENST00000489053 PTGES3LE9PB15 166 aa7.41□□□□□ -1.22
HDAC6-232ENST00000489053 SLC33A1O00400 549 aaPredicted RBP7.41□□□□□ -1.22
HDAC6-232ENST00000489053 XPNPEP2O43895 674 aa7.41□□□□□ -1.22
HDAC6-232ENST00000489053 GNAO1P09471 354 aa7.41□□□□□ -1.22
HDAC6-232ENST00000489053 GTF2F2P13984 249 aa7.41□□□□□ -1.22
HDAC6-232ENST00000489053 CELP19835 753 aa7.41□□□□□ -1.22
HDAC6-232ENST00000489053 SERPINA2P20848 420 aa7.41□□□□□ -1.22
HDAC6-232ENST00000489053 MNDAP41218 407 aa7.41□□□□□ -1.22
HDAC6-232ENST00000489053 OR3A4PP47883 348 aa7.41□□□□□ -1.22
HDAC6-232ENST00000489053 GLIPR1P48060 266 aa7.41□□□□□ -1.22
HDAC6-232ENST00000489053 KCNJ3P48549 501 aa7.41□□□□□ -1.22
HDAC6-232ENST00000489053 DLX6P56179 175 aa7.41□□□□□ -1.22
HDAC6-232ENST00000489053 WNT4P56705 351 aa7.41□□□□□ -1.22
HDAC6-232ENST00000489053 ZP1P60852 638 aa7.41□□□□□ -1.22
HDAC6-232ENST00000489053 RELBQ01201 579 aa7.41□□□□□ -1.22
HDAC6-232ENST00000489053 GPR176Q14439 515 aa7.41□□□□□ -1.22
HDAC6-232ENST00000489053 C2orf68Q2NKX9 166 aa7.41□□□□□ -1.22
HDAC6-232ENST00000489053 SLC22A6Q4U2R8 563 aa7.41□□□□□ -1.22
HDAC6-232ENST00000489053 PRR31Q5SQ13 230 aa7.41□□□□□ -1.22
HDAC6-232ENST00000489053 ATAD3CQ5T2N8 411 aa7.41□□□□□ -1.22
HDAC6-232ENST00000489053 ZNF626Q68DY1 528 aa7.41□□□□□ -1.22
HDAC6-232ENST00000489053 XAF1Q6GPH4 301 aa7.41□□□□□ -1.22
HDAC6-232ENST00000489053 HCP5Q6MZN7 132 aa7.41□□□□□ -1.22
HDAC6-232ENST00000489053 LHFPL4Q7Z7J7 247 aa7.41□□□□□ -1.22
HDAC6-232ENST00000489053 LINC00596Q86U02 117 aa7.41□□□□□ -1.22
HDAC6-232ENST00000489053 OSR2Q8N2R0 312 aa7.41□□□□□ -1.22
HDAC6-232ENST00000489053 OR11H6Q8NGC7 330 aa7.41□□□□□ -1.22
HDAC6-232ENST00000489053 OR51A2Q8NGJ7 313 aa7.41□□□□□ -1.22
HDAC6-232ENST00000489053 ZNF184Q99676 751 aaPredicted RBP7.41□□□□□ -1.22
HDAC6-232ENST00000489053 MND1Q9BWT6 205 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms