RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 UBAC2Q8NBM4 344 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 CHST4Q8NCG5 386 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 OR11H1Q8NG94 326 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 GPR32P1Q8NGA4 272 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 OR10G3Q8NGC4 313 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 OR51G1Q8NGK1 321 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 OR11H2Q8NH07 326 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 SDR42E1Q8WUS8 393 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 MAFIPQ8WZ33 124 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 RDH5Q92781 318 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 UCN3Q969E3 161 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 TCEAL4Q96EI5 215 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 TSC22D3Q99576 134 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 TM2D1Q9BX74 207 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 QTRT1Q9BXR0 403 aaKnown RBP2.32□□□□□ -2.04
HMGN4-202ENST00000477243 PECRQ9BY49 303 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 SLC19A3Q9BZV2 496 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 TRIM4Q9C037 500 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 IL25Q9H293 177 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 ARV1Q9H2C2 271 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 TXNIPQ9H3M7 391 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 LIME1Q9H400 295 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 ZNF430Q9H8G1 570 aaPredicted RBP2.32□□□□□ -2.04
HMGN4-202ENST00000477243 PANK3Q9H999 370 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 AMBNQ9NP70 447 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 SIX2Q9NPC8 291 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 BIN3Q9NQY0 253 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 RBM22Q9NW64 420 aaKnown RBP eCLIP2.32□□□□□ -2.04
HMGN4-202ENST00000477243 PRO0628Q9UI54 55 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 ANXA10Q9UJ72 324 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 NDUFAF1Q9Y375 327 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 OR51B4Q9Y5P0 310 aa2.32□□□□□ -2.04
HMGN4-202ENST00000477243 ROCK2O75116 1388 aaKnown RBP2.32□□□□□ -2.04
HMGN4-202ENST00000477243 MYH10P35580 1976 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 IGKV1D-8A0A087WSZ0 117 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 SAA2-SAA4A0A096LPE2 208 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 A0A0G2JMP0 313 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 ZNF726A6NNF4 738 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 NCBP2LA6PVI3 153 aaKnown RBP2.31□□□□□ -2.04
HMGN4-202ENST00000477243 FAM220BPB1ANY3 271 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 LOC730098B7Z3J9 87 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 PPP5D1E7EU14 171 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 C16orf97H3BN30 126 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 K7EMT4 169 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 K7ENP7 123 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 GABRPO00591 440 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 SLC17A2O00624 439 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 MYL12BO14950 172 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 KMOO15229 486 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 CHP2O43745 196 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 MAGEC1O60732 1142 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 AIFM1O95831 613 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 IFNA1P01562 189 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 PPBPP02775 128 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 GIPP09681 153 aaPredicted RBP2.31□□□□□ -2.04
HMGN4-202ENST00000477243 LINC00614P0C842 121 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 PGA4P0DJD7 388 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 PGA3P0DJD8 388 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 CT45A10P0DMU9 189 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 ICAM2P13598 275 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 ZNF12P17014 697 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 PAX6P26367 422 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 PPICP45877 212 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 GCLMP48507 274 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 SRP9P49458 86 aaKnown RBP2.31□□□□□ -2.04
HMGN4-202ENST00000477243 FGF8P55075 233 aaPredicted RBP2.31□□□□□ -2.04
HMGN4-202ENST00000477243 FOXG1P55316 489 aaPredicted RBP2.31□□□□□ -2.04
HMGN4-202ENST00000477243 TCTAP57738 103 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 LMO4P61968 165 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 HIST1H3AP68431 136 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 H3F3AP84243 136 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 IL5RAQ01344 420 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 MXD1Q05195 221 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 TCP10Q12799 353 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 NDUFA5Q16718 116 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 CDNFQ49AH0 187 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 PXDC1Q5TGL8 231 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 MARC1Q5VT66 337 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 RASSF6Q6ZTQ3 369 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 FAM183BPQ6ZVS7 135 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 HIST2H3AQ71DI3 136 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 NOTCH2NLQ7Z3S9 236 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 YTHDF3Q7Z739 585 aaKnown RBP2.31□□□□□ -2.04
HMGN4-202ENST00000477243 PIP4P1Q86T03 277 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 P2RY8Q86VZ1 359 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 CARM1Q86X55 608 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 C9orf40Q8IXQ3 194 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 ZADH2Q8N4Q0 377 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 COX18Q8N8Q8 333 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 WDSUB1Q8N9V3 476 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 NUP37Q8NFH4 326 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 OR4M2Q8NGB6 313 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 OR10W1Q8NGF6 305 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 OR4C13Q8NGP0 309 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 OR2A12Q8NGT7 310 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 RNASE11Q8TAA1 199 aaKnown RBP2.31□□□□□ -2.04
HMGN4-202ENST00000477243 C11orf45Q8TAV5 145 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 AGAP11Q8TF27 550 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.31□□□□□ -2.04
HMGN4-202ENST00000477243 CYGBQ8WWM9 190 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms