RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 TMPRSS11AQ6ZMR5 421 aa17.6■□□□□ 0.41
LIME1-203ENST00000465591 RHOFQ9HBH0 211 aa17.6■□□□□ 0.41
LIME1-203ENST00000465591 BABAM2Q9NXR7 383 aa17.6■□□□□ 0.41
LIME1-203ENST00000465591 EXOSC1Q9Y3B2 195 aaKnown RBP17.6■□□□□ 0.41
LIME1-203ENST00000465591 TBL2Q9Y4P3 447 aaKnown RBP17.6■□□□□ 0.41
LIME1-203ENST00000465591 MEGF8Q7Z7M0 2845 aa17.6■□□□□ 0.41
LIME1-203ENST00000465591 IGHV2-26A0A0B4J1V2 119 aa17.59■□□□□ 0.41
LIME1-203ENST00000465591 IRGMA1A4Y4 181 aa17.59■□□□□ 0.41
LIME1-203ENST00000465591 VGLL3A8MV65 326 aa17.59■□□□□ 0.41
LIME1-203ENST00000465591 DYNC1I2Q13409 638 aaKnown RBP17.59■□□□□ 0.41
LIME1-203ENST00000465591 SSX2Q16385 188 aa17.59■□□□□ 0.41
LIME1-203ENST00000465591 PRAMEF5Q5TYX0 476 aa17.59■□□□□ 0.41
LIME1-203ENST00000465591 CCBE1Q6UXH8 406 aaPredicted RBP17.59■□□□□ 0.41
LIME1-203ENST00000465591 TRAPPC6BQ86SZ2 158 aa17.59■□□□□ 0.41
LIME1-203ENST00000465591 SATL1Q86VE3 508 aa17.59■□□□□ 0.41
LIME1-203ENST00000465591 ZFP41Q8N8Y5 198 aa17.59■□□□□ 0.41
LIME1-203ENST00000465591 PXT1Q8NFP0 134 aa17.59■□□□□ 0.41
LIME1-203ENST00000465591 OR10K1Q8NGX5 313 aa17.59■□□□□ 0.41
LIME1-203ENST00000465591 TNFAIP8L1Q8WVP5 186 aa17.59■□□□□ 0.41
LIME1-203ENST00000465591 TMEM106AQ96A25 262 aa17.59■□□□□ 0.41
LIME1-203ENST00000465591 SMIM19Q96E16 107 aa17.59■□□□□ 0.41
LIME1-203ENST00000465591 TMEM80Q96HE8 168 aa17.59■□□□□ 0.41
LIME1-203ENST00000465591 TMEM133Q9H2Q1 129 aa17.59■□□□□ 0.41
LIME1-203ENST00000465591 ING3Q9NXR8 418 aa17.59■□□□□ 0.41
LIME1-203ENST00000465591 UBE2J1Q9Y385 318 aaPredicted RBP17.59■□□□□ 0.41
LIME1-203ENST00000465591 XPNPEP2O43895 674 aa17.58■□□□□ 0.4
LIME1-203ENST00000465591 MYL12AP19105 171 aa17.58■□□□□ 0.4
LIME1-203ENST00000465591 OR3A4PP47883 348 aa17.58■□□□□ 0.4
LIME1-203ENST00000465591 MTNR1BP49286 362 aa17.58■□□□□ 0.4
LIME1-203ENST00000465591 ATXN7L3Q14CW9 347 aaPredicted RBP17.58■□□□□ 0.4
LIME1-203ENST00000465591 FAM189A2Q15884 450 aa17.58■□□□□ 0.4
LIME1-203ENST00000465591 DMKNQ6E0U4 476 aaPredicted RBP17.58■□□□□ 0.4
LIME1-203ENST00000465591 ELP2Q6IA86 826 aa17.58■□□□□ 0.4
LIME1-203ENST00000465591 MALSU1Q96EH3 234 aa17.58■□□□□ 0.4
LIME1-203ENST00000465591 NR1H4Q96RI1 486 aaPredicted RBP17.58■□□□□ 0.4
LIME1-203ENST00000465591 PPIL3Q9H2H8 161 aaKnown RBP17.58■□□□□ 0.4
LIME1-203ENST00000465591 ZNF581Q9P0T4 197 aa17.58■□□□□ 0.4
LIME1-203ENST00000465591 FBLN5Q9UBX5 448 aa17.58■□□□□ 0.4
LIME1-203ENST00000465591 ZNF281Q9Y2X9 895 aa17.58■□□□□ 0.4
LIME1-203ENST00000465591 HSPE1-MOB4S4R3N1 261 aa17.58■□□□□ 0.4
LIME1-203ENST00000465591 ODAMA1E959 279 aa17.57■□□□□ 0.4
LIME1-203ENST00000465591 DEGS1O15121 323 aa17.57■□□□□ 0.4
LIME1-203ENST00000465591 CSN2P05814 226 aa17.57■□□□□ 0.4
LIME1-203ENST00000465591 GABRA5P31644 462 aa17.57■□□□□ 0.4
LIME1-203ENST00000465591 RPS11P62280 158 aaKnown RBP eCLIP17.57■□□□□ 0.4
LIME1-203ENST00000465591 ST3GAL4Q11206 333 aa17.57■□□□□ 0.4
LIME1-203ENST00000465591 UTF1Q5T230 341 aa17.57■□□□□ 0.4
LIME1-203ENST00000465591 ASCL4Q6XD76 172 aa17.57■□□□□ 0.4
LIME1-203ENST00000465591 OR52N1Q8NH53 320 aa17.57■□□□□ 0.4
LIME1-203ENST00000465591 FBLIM1Q8WUP2 373 aa17.57■□□□□ 0.4
LIME1-203ENST00000465591 CORO2AQ92828 525 aa17.57■□□□□ 0.4
LIME1-203ENST00000465591 GHSRQ92847 366 aa17.57■□□□□ 0.4
LIME1-203ENST00000465591 FOXRED1Q96CU9 486 aaPredicted RBP17.57■□□□□ 0.4
LIME1-203ENST00000465591 PGLYRP3Q96LB9 341 aa17.57■□□□□ 0.4
LIME1-203ENST00000465591 GPER1Q99527 375 aa17.57■□□□□ 0.4
LIME1-203ENST00000465591 PCDHGB5Q9Y5G0 923 aa17.57■□□□□ 0.4
LIME1-203ENST00000465591 TRGV10A0A0A0MS01 117 aa17.56■□□□□ 0.4
LIME1-203ENST00000465591 TRAV24A0A0B4J272 114 aa17.56■□□□□ 0.4
LIME1-203ENST00000465591 TRBV5-5A0A0J9YX44 114 aa17.56■□□□□ 0.4
LIME1-203ENST00000465591 FAM172BPA6NC97 362 aa17.56■□□□□ 0.4
LIME1-203ENST00000465591 MAGEA13PA6NCF6 341 aa17.56■□□□□ 0.4
LIME1-203ENST00000465591 HSPB6O14558 160 aa17.56■□□□□ 0.4
LIME1-203ENST00000465591 CD2P06729 351 aa17.56■□□□□ 0.4
LIME1-203ENST00000465591 CDK2P24941 298 aa17.56■□□□□ 0.4
LIME1-203ENST00000465591 PIGYQ3MUY2 71 aa17.56■□□□□ 0.4
LIME1-203ENST00000465591 KRBOX4Q5JUW0 171 aa17.56■□□□□ 0.4
LIME1-203ENST00000465591 HIST2H2BDQ6DRA6 164 aa17.56■□□□□ 0.4
LIME1-203ENST00000465591 C8orf59Q8N0T1 100 aaPredicted RBP17.56■□□□□ 0.4
LIME1-203ENST00000465591 CHST4Q8NCG5 386 aa17.56■□□□□ 0.4
LIME1-203ENST00000465591 Q8NFD4 153 aa17.56■□□□□ 0.4
LIME1-203ENST00000465591 OR4P4Q8NGL7 312 aa17.56■□□□□ 0.4
LIME1-203ENST00000465591 TFAP2CQ92754 450 aa17.56■□□□□ 0.4
LIME1-203ENST00000465591 CLEC7AQ9BXN2 247 aa17.56■□□□□ 0.4
LIME1-203ENST00000465591 FAM192AQ9GZU8 254 aa17.56■□□□□ 0.4
LIME1-203ENST00000465591 TCF7L1Q9HCS4 588 aa17.56■□□□□ 0.4
LIME1-203ENST00000465591 TCF19Q9Y242 345 aa17.56■□□□□ 0.4
LIME1-203ENST00000465591 HILPDAQ9Y5L2 63 aa17.56■□□□□ 0.4
LIME1-203ENST00000465591 A6NDX4 124 aa17.55■□□□□ 0.4
LIME1-203ENST00000465591 MAGEB3O15480 346 aa17.55■□□□□ 0.4
LIME1-203ENST00000465591 CDRT1O95170 752 aa17.55■□□□□ 0.4
LIME1-203ENST00000465591 ALDOBP05062 364 aa17.55■□□□□ 0.4
LIME1-203ENST00000465591 KIR2DS4P43632 304 aa17.55■□□□□ 0.4
LIME1-203ENST00000465591 HSPA13P48723 471 aa17.55■□□□□ 0.4
LIME1-203ENST00000465591 EFNB2P52799 333 aa17.55■□□□□ 0.4
LIME1-203ENST00000465591 AQP4P55087 323 aa17.55■□□□□ 0.4
LIME1-203ENST00000465591 C17orf58Q2M2W7 97 aa17.55■□□□□ 0.4
LIME1-203ENST00000465591 HEPN1Q6WQI6 88 aa17.55■□□□□ 0.4
LIME1-203ENST00000465591 TMEM219Q86XT9 240 aa17.55■□□□□ 0.4
LIME1-203ENST00000465591 OR51T1Q8NGJ9 327 aa17.55■□□□□ 0.4
LIME1-203ENST00000465591 TAS2R3Q9NYW6 316 aa17.55■□□□□ 0.4
LIME1-203ENST00000465591 PSORS1C1Q9UIG5 152 aa17.55■□□□□ 0.4
LIME1-203ENST00000465591 NOTCH1P46531 2555 aa17.54■□□□□ 0.4
LIME1-203ENST00000465591 TET2Q6N021 2002 aaPredicted RBP17.54■□□□□ 0.4
LIME1-203ENST00000465591 IGFBP3P17936 291 aaPredicted RBP17.54■□□□□ 0.4
LIME1-203ENST00000465591 C21orf33P30042 268 aaPredicted RBP17.54■□□□□ 0.4
LIME1-203ENST00000465591 VHLP40337 213 aa17.54■□□□□ 0.4
LIME1-203ENST00000465591 PTGFRP43088 359 aa17.54■□□□□ 0.4
LIME1-203ENST00000465591 DDI2Q5TDH0 399 aa17.54■□□□□ 0.4
LIME1-203ENST00000465591 MINOS1Q5TGZ0 78 aa17.54■□□□□ 0.4
LIME1-203ENST00000465591 AHSA2Q719I0 299 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms