RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 DYNC1I2Q13409 638 aaKnown RBP14.31□□□□□ -0.12
LSM5-204ENST00000409909 DMKNQ6E0U4 476 aaPredicted RBP14.31□□□□□ -0.12
LSM5-204ENST00000409909 TREML4Q6UXN2 200 aa14.31□□□□□ -0.12
LSM5-204ENST00000409909 ASCL4Q6XD76 172 aa14.31□□□□□ -0.12
LSM5-204ENST00000409909 TRAPPC6BQ86SZ2 158 aa14.31□□□□□ -0.12
LSM5-204ENST00000409909 CHST4Q8NCG5 386 aa14.31□□□□□ -0.12
LSM5-204ENST00000409909 PXT1Q8NFP0 134 aa14.31□□□□□ -0.12
LSM5-204ENST00000409909 OR52N1Q8NH53 320 aa14.31□□□□□ -0.12
LSM5-204ENST00000409909 FBLIM1Q8WUP2 373 aa14.31□□□□□ -0.12
LSM5-204ENST00000409909 TNFAIP8L1Q8WVP5 186 aa14.31□□□□□ -0.12
LSM5-204ENST00000409909 CORO2AQ92828 525 aa14.31□□□□□ -0.12
LSM5-204ENST00000409909 GHSRQ92847 366 aa14.31□□□□□ -0.12
LSM5-204ENST00000409909 SMIM19Q96E16 107 aa14.31□□□□□ -0.12
LSM5-204ENST00000409909 NR1H4Q96RI1 486 aaPredicted RBP14.31□□□□□ -0.12
LSM5-204ENST00000409909 TMEM133Q9H2Q1 129 aa14.31□□□□□ -0.12
LSM5-204ENST00000409909 ZNF281Q9Y2X9 895 aa14.31□□□□□ -0.12
LSM5-204ENST00000409909 SIGLEC9Q9Y336 463 aa14.31□□□□□ -0.12
LSM5-204ENST00000409909 IGHV2-26A0A0B4J1V2 119 aa14.3□□□□□ -0.12
LSM5-204ENST00000409909 MAGEB3O15480 346 aa14.3□□□□□ -0.12
LSM5-204ENST00000409909 XPNPEP2O43895 674 aa14.3□□□□□ -0.12
LSM5-204ENST00000409909 ALDOBP05062 364 aa14.3□□□□□ -0.12
LSM5-204ENST00000409909 CSN2P05814 226 aa14.3□□□□□ -0.12
LSM5-204ENST00000409909 CD2P06729 351 aa14.3□□□□□ -0.12
LSM5-204ENST00000409909 JUNBP17275 347 aaPredicted RBP14.3□□□□□ -0.12
LSM5-204ENST00000409909 RPS11P62280 158 aaKnown RBP eCLIP14.3□□□□□ -0.12
LSM5-204ENST00000409909 DOC2BQ14184 412 aa14.3□□□□□ -0.12
LSM5-204ENST00000409909 SSX2Q16385 188 aa14.3□□□□□ -0.12
LSM5-204ENST00000409909 PRAMEF5Q5TYX0 476 aa14.3□□□□□ -0.12
LSM5-204ENST00000409909 CCBE1Q6UXH8 406 aaPredicted RBP14.3□□□□□ -0.12
LSM5-204ENST00000409909 C8orf59Q8N0T1 100 aaPredicted RBP14.3□□□□□ -0.12
LSM5-204ENST00000409909 ZFP41Q8N8Y5 198 aa14.3□□□□□ -0.12
LSM5-204ENST00000409909 OR10K1Q8NGX5 313 aa14.3□□□□□ -0.12
LSM5-204ENST00000409909 GPER1Q99527 375 aa14.3□□□□□ -0.12
LSM5-204ENST00000409909 ING3Q9NXR8 418 aa14.3□□□□□ -0.12
LSM5-204ENST00000409909 FBLN5Q9UBX5 448 aa14.3□□□□□ -0.12
LSM5-204ENST00000409909 PSORS1C1Q9UIG5 152 aa14.3□□□□□ -0.12
LSM5-204ENST00000409909 TRGV10A0A0A0MS01 117 aa14.29□□□□□ -0.12
LSM5-204ENST00000409909 TRAV24A0A0B4J272 114 aa14.29□□□□□ -0.12
LSM5-204ENST00000409909 TRBV5-5A0A0J9YX44 114 aa14.29□□□□□ -0.12
LSM5-204ENST00000409909 ODAMA1E959 279 aa14.29□□□□□ -0.12
LSM5-204ENST00000409909 GDNFP39905 211 aa14.29□□□□□ -0.12
LSM5-204ENST00000409909 PTGFRP43088 359 aa14.29□□□□□ -0.12
LSM5-204ENST00000409909 OR3A4PP47883 348 aa14.29□□□□□ -0.12
LSM5-204ENST00000409909 ATXN7L3Q14CW9 347 aaPredicted RBP14.29□□□□□ -0.12
LSM5-204ENST00000409909 FAM189A2Q15884 450 aa14.29□□□□□ -0.12
LSM5-204ENST00000409909 KRBOX4Q5JUW0 171 aa14.29□□□□□ -0.12
LSM5-204ENST00000409909 Q8NFD4 153 aa14.29□□□□□ -0.12
LSM5-204ENST00000409909 OR51T1Q8NGJ9 327 aa14.29□□□□□ -0.12
LSM5-204ENST00000409909 FOXRED1Q96CU9 486 aaPredicted RBP14.29□□□□□ -0.12
LSM5-204ENST00000409909 PGLYRP3Q96LB9 341 aa14.29□□□□□ -0.12
LSM5-204ENST00000409909 CLEC7AQ9BXN2 247 aa14.29□□□□□ -0.12
LSM5-204ENST00000409909 PPIL3Q9H2H8 161 aaKnown RBP14.29□□□□□ -0.12
LSM5-204ENST00000409909 TMEM138Q9NPI0 162 aa14.29□□□□□ -0.12
LSM5-204ENST00000409909 CHCHD3Q9NX63 227 aaKnown RBP14.29□□□□□ -0.12
LSM5-204ENST00000409909 CNOT2Q9NZN8 540 aaKnown RBP14.29□□□□□ -0.12
LSM5-204ENST00000409909 NKX1-2Q9UD57 310 aaPredicted RBP14.29□□□□□ -0.12
LSM5-204ENST00000409909 NOTCH1P46531 2555 aa14.29□□□□□ -0.12
LSM5-204ENST00000409909 FUOMA2VDF0 154 aa14.28□□□□□ -0.12
LSM5-204ENST00000409909 EFCAB10A6NFE3 127 aa14.28□□□□□ -0.12
LSM5-204ENST00000409909 H0YJX3 145 aa14.28□□□□□ -0.12
LSM5-204ENST00000409909 CDRT1O95170 752 aa14.28□□□□□ -0.12
LSM5-204ENST00000409909 IGFBP3P17936 291 aaPredicted RBP14.28□□□□□ -0.12
LSM5-204ENST00000409909 CDK2P24941 298 aa14.28□□□□□ -0.12
LSM5-204ENST00000409909 C21orf33P30042 268 aaPredicted RBP14.28□□□□□ -0.12
LSM5-204ENST00000409909 GABRA5P31644 462 aa14.28□□□□□ -0.12
LSM5-204ENST00000409909 KIR2DS4P43632 304 aa14.28□□□□□ -0.12
LSM5-204ENST00000409909 RSU1Q15404 277 aa14.28□□□□□ -0.12
LSM5-204ENST00000409909 PIGYQ3MUY2 71 aa14.28□□□□□ -0.12
LSM5-204ENST00000409909 HEPN1Q6WQI6 88 aa14.28□□□□□ -0.12
LSM5-204ENST00000409909 TFAP2CQ92754 450 aa14.28□□□□□ -0.12
LSM5-204ENST00000409909 CPNE2Q96FN4 548 aaPredicted RBP14.28□□□□□ -0.12
LSM5-204ENST00000409909 FAM192AQ9GZU8 254 aa14.28□□□□□ -0.12
LSM5-204ENST00000409909 GAL3ST2Q9H3Q3 398 aa14.28□□□□□ -0.12
LSM5-204ENST00000409909 PLCXD1Q9NUJ7 323 aa14.28□□□□□ -0.12
LSM5-204ENST00000409909 TAS2R3Q9NYW6 316 aa14.28□□□□□ -0.12
LSM5-204ENST00000409909 ZNF581Q9P0T4 197 aa14.28□□□□□ -0.12
LSM5-204ENST00000409909 HILPDAQ9Y5L2 63 aa14.28□□□□□ -0.12
LSM5-204ENST00000409909 MAGEA13PA6NCF6 341 aa14.27□□□□□ -0.13
LSM5-204ENST00000409909 A6NDX4 124 aa14.27□□□□□ -0.13
LSM5-204ENST00000409909 HSPB6O14558 160 aa14.27□□□□□ -0.13
LSM5-204ENST00000409909 EFNB2P52799 333 aa14.27□□□□□ -0.13
LSM5-204ENST00000409909 MED21Q13503 144 aa14.27□□□□□ -0.13
LSM5-204ENST00000409909 UTF1Q5T230 341 aa14.27□□□□□ -0.13
LSM5-204ENST00000409909 DDI2Q5TDH0 399 aa14.27□□□□□ -0.13
LSM5-204ENST00000409909 MINOS1Q5TGZ0 78 aa14.27□□□□□ -0.13
LSM5-204ENST00000409909 LIAT1Q6ZQX7 453 aa14.27□□□□□ -0.13
LSM5-204ENST00000409909 AHSA2Q719I0 299 aa14.27□□□□□ -0.13
LSM5-204ENST00000409909 TMEM219Q86XT9 240 aa14.27□□□□□ -0.13
LSM5-204ENST00000409909 ABHD12Q8N2K0 398 aa14.27□□□□□ -0.13
LSM5-204ENST00000409909 BPIFB6Q8NFQ5 453 aa14.27□□□□□ -0.13
LSM5-204ENST00000409909 OR4P4Q8NGL7 312 aa14.27□□□□□ -0.13
LSM5-204ENST00000409909 DCLRE1BQ9H816 532 aa14.27□□□□□ -0.13
LSM5-204ENST00000409909 TCF7L1Q9HCS4 588 aa14.27□□□□□ -0.13
LSM5-204ENST00000409909 RAB18Q9NP72 206 aa14.27□□□□□ -0.13
LSM5-204ENST00000409909 FKBP14Q9NWM8 211 aa14.27□□□□□ -0.13
LSM5-204ENST00000409909 ING4Q9UNL4 249 aa14.27□□□□□ -0.13
LSM5-204ENST00000409909 TCF19Q9Y242 345 aa14.27□□□□□ -0.13
LSM5-204ENST00000409909 MINOS1-NBL1R4GNA1 71 aa14.27□□□□□ -0.13
LSM5-204ENST00000409909 TRAV8-7A0A075B6U6 113 aa14.26□□□□□ -0.13
LSM5-204ENST00000409909 FAM172BPA6NC97 362 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms