RNA–Protein interactions for RNA: ENST00000395066.7

CLK3-202, Transcript of CDC like kinase 3, humanhuman

TSL 1 (best) BASIC

Gene CLK3, Length 2,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-202ENST00000395066 RAC3P60763 192 aa17.8■□□□□ 0.44
CLK3-202ENST00000395066 CLINT1Q14677 625 aa17.8■□□□□ 0.44
CLK3-202ENST00000395066 GALNT14Q96FL9 552 aa17.8■□□□□ 0.44
CLK3-202ENST00000395066 C18orf12Q96KH6 178 aa17.8■□□□□ 0.44
CLK3-202ENST00000395066 HS3ST6Q96QI5 342 aa17.8■□□□□ 0.44
CLK3-202ENST00000395066 FOXB1Q99853 325 aa17.8■□□□□ 0.44
CLK3-202ENST00000395066 CRIM1Q9NZV1 1036 aa17.8■□□□□ 0.44
CLK3-202ENST00000395066 ZNF407Q9C0G0 2248 aa17.8■□□□□ 0.44
CLK3-202ENST00000395066 CCDC163A0A0D9SF12 145 aa17.8■□□□□ 0.44
CLK3-202ENST00000395066 C9J4A7 227 aa17.8■□□□□ 0.44
CLK3-202ENST00000395066 C3orf80F5H4A9 247 aa17.8■□□□□ 0.44
CLK3-202ENST00000395066 HSPB6O14558 160 aa17.8■□□□□ 0.44
CLK3-202ENST00000395066 NXPH3O95157 252 aa17.8■□□□□ 0.44
CLK3-202ENST00000395066 CST2P09228 141 aa17.8■□□□□ 0.44
CLK3-202ENST00000395066 CCL2P13500 99 aa17.8■□□□□ 0.44
CLK3-202ENST00000395066 EDN3P14138 238 aa17.8■□□□□ 0.44
CLK3-202ENST00000395066 MAS1LP35410 378 aa17.8■□□□□ 0.44
CLK3-202ENST00000395066 PPP1CCP36873 323 aaKnown RBP17.8■□□□□ 0.44
CLK3-202ENST00000395066 CLDN15P56746 228 aa17.8■□□□□ 0.44
CLK3-202ENST00000395066 LHFPL2Q6ZUX7 228 aa17.8■□□□□ 0.44
CLK3-202ENST00000395066 C1QL4Q86Z23 238 aa17.8■□□□□ 0.44
CLK3-202ENST00000395066 CLDN23Q96B33 292 aa17.8■□□□□ 0.44
CLK3-202ENST00000395066 BCL2L14Q9BZR8 327 aa17.8■□□□□ 0.44
CLK3-202ENST00000395066 SIT1Q9Y3P8 196 aa17.8■□□□□ 0.44
CLK3-202ENST00000395066 hCG_38984A0A1B0GV85 526 aa17.79■□□□□ 0.44
CLK3-202ENST00000395066 H7C1Q1 480 aa17.79■□□□□ 0.44
CLK3-202ENST00000395066 OR2C1O95371 312 aa17.79■□□□□ 0.44
CLK3-202ENST00000395066 CCNOP22674 350 aa17.79■□□□□ 0.44
CLK3-202ENST00000395066 RPS23P62266 143 aaKnown RBP17.79■□□□□ 0.44
CLK3-202ENST00000395066 IL11RAQ14626 422 aa17.79■□□□□ 0.44
CLK3-202ENST00000395066 TMEM182Q6ZP80 229 aaPredicted RBP17.79■□□□□ 0.44
CLK3-202ENST00000395066 SLC25A26Q70HW3 274 aa17.79■□□□□ 0.44
CLK3-202ENST00000395066 LFNGQ8NES3 379 aa17.79■□□□□ 0.44
CLK3-202ENST00000395066 OR10D3Q8NH80 312 aa17.79■□□□□ 0.44
CLK3-202ENST00000395066 FAM213BQ8TBF2 198 aa17.79■□□□□ 0.44
CLK3-202ENST00000395066 OR2H1Q9GZK4 316 aa17.79■□□□□ 0.44
CLK3-202ENST00000395066 BCO1Q9HAY6 547 aa17.79■□□□□ 0.44
CLK3-202ENST00000395066 PUS1Q9Y606 427 aaKnown RBP eCLIP17.79■□□□□ 0.44
CLK3-202ENST00000395066 OTX2P32243 289 aa17.79■□□□□ 0.44
CLK3-202ENST00000395066 IL13RA2Q14627 380 aa17.79■□□□□ 0.44
CLK3-202ENST00000395066 INTS12Q96CB8 462 aaKnown RBP17.79■□□□□ 0.44
CLK3-202ENST00000395066 SUCNR1Q9BXA5 334 aa17.79■□□□□ 0.44
CLK3-202ENST00000395066 ZNF286AQ9HBT8 521 aa17.79■□□□□ 0.44
CLK3-202ENST00000395066 OMGP23515 440 aa17.78■□□□□ 0.44
CLK3-202ENST00000395066 DUSP1P28562 367 aa17.78■□□□□ 0.44
CLK3-202ENST00000395066 Q0VFX4 171 aa17.78■□□□□ 0.44
CLK3-202ENST00000395066 SOHLH1Q5JUK2 328 aa17.78■□□□□ 0.44
CLK3-202ENST00000395066 ZNF611Q8N823 705 aa17.78■□□□□ 0.44
CLK3-202ENST00000395066 LRTM2Q8N967 370 aa17.78■□□□□ 0.44
CLK3-202ENST00000395066 OR2Y1Q8NGV0 311 aa17.78■□□□□ 0.44
CLK3-202ENST00000395066 MAFAQ8NHW3 353 aaPredicted RBP17.78■□□□□ 0.44
CLK3-202ENST00000395066 M1APQ8TC57 530 aa17.78■□□□□ 0.44
CLK3-202ENST00000395066 NAT6Q93015 286 aa17.78■□□□□ 0.44
CLK3-202ENST00000395066 YPEL4Q96NS1 127 aa17.78■□□□□ 0.44
CLK3-202ENST00000395066 IL36RNQ9UBH0 155 aa17.78■□□□□ 0.44
CLK3-202ENST00000395066 FAM186AA6NE01 2351 aa17.78■□□□□ 0.44
CLK3-202ENST00000395066 FBP1P09467 338 aa17.78■□□□□ 0.44
CLK3-202ENST00000395066 TCN2P20062 427 aa17.78■□□□□ 0.44
CLK3-202ENST00000395066 TMEM42Q69YG0 159 aa17.78■□□□□ 0.44
CLK3-202ENST00000395066 HEPN1Q6WQI6 88 aa17.78■□□□□ 0.44
CLK3-202ENST00000395066 SUMF2Q8NBJ7 301 aa17.78■□□□□ 0.44
CLK3-202ENST00000395066 DEPPQ9NTK1 212 aa17.78■□□□□ 0.44
CLK3-202ENST00000395066 PILRBQ9UKJ0 227 aa17.78■□□□□ 0.44
CLK3-202ENST00000395066 A0A1B0GW64 132 aa17.77■□□□□ 0.44
CLK3-202ENST00000395066 NKX2-6A6NCS4 301 aa17.77■□□□□ 0.44
CLK3-202ENST00000395066 ST8SIA3O43173 380 aa17.77■□□□□ 0.44
CLK3-202ENST00000395066 MALLQ13021 153 aa17.77■□□□□ 0.44
CLK3-202ENST00000395066 ASCL4Q6XD76 172 aa17.77■□□□□ 0.44
CLK3-202ENST00000395066 CPEB3Q8NE35 698 aaKnown RBP17.77■□□□□ 0.44
CLK3-202ENST00000395066 MOB3AQ96BX8 217 aa17.77■□□□□ 0.44
CLK3-202ENST00000395066 RARRES2Q99969 163 aa17.77■□□□□ 0.44
CLK3-202ENST00000395066 MAGT1Q9H0U3 335 aa17.77■□□□□ 0.44
CLK3-202ENST00000395066 PINLYPA6NC86 204 aa17.77■□□□□ 0.43
CLK3-202ENST00000395066 FAM24AA6NFZ4 105 aa17.77■□□□□ 0.43
CLK3-202ENST00000395066 K7N7A8 449 aa17.77■□□□□ 0.43
CLK3-202ENST00000395066 PDCD6O75340 191 aa17.77■□□□□ 0.43
CLK3-202ENST00000395066 RBM11P57052 281 aaKnown RBP17.77■□□□□ 0.43
CLK3-202ENST00000395066 RAB2AP61019 212 aa17.77■□□□□ 0.43
CLK3-202ENST00000395066 HERV-K104P61576 105 aa17.77■□□□□ 0.43
CLK3-202ENST00000395066 ABHD14AQ9BUJ0 271 aa17.77■□□□□ 0.43
CLK3-202ENST00000395066 GGACTQ9BVM4 153 aa17.77■□□□□ 0.43
CLK3-202ENST00000395066 TOLLIPQ9H0E2 274 aa17.77■□□□□ 0.43
CLK3-202ENST00000395066 DOCK7Q96N67 2140 aa17.77■□□□□ 0.43
CLK3-202ENST00000395066 P04436 131 aa17.76■□□□□ 0.43
CLK3-202ENST00000395066 CPT1CQ8TCG5 803 aa17.76■□□□□ 0.43
CLK3-202ENST00000395066 SF3B5Q9BWJ5 86 aaKnown RBP17.76■□□□□ 0.43
CLK3-202ENST00000395066 SLC7A11Q9UPY5 501 aa17.76■□□□□ 0.43
CLK3-202ENST00000395066 A0A096LPE4 126 aa17.76■□□□□ 0.43
CLK3-202ENST00000395066 A0A1W2PPZ6 126 aa17.76■□□□□ 0.43
CLK3-202ENST00000395066 PPYP01298 95 aa17.76■□□□□ 0.43
CLK3-202ENST00000395066 KIAA0141Q14154 515 aaPredicted RBP17.76■□□□□ 0.43
CLK3-202ENST00000395066 LGI3Q8N145 548 aa17.76■□□□□ 0.43
CLK3-202ENST00000395066 LRRC3CA6NJW4 275 aa17.75■□□□□ 0.43
CLK3-202ENST00000395066 GJE1A6NN92 205 aa17.75■□□□□ 0.43
CLK3-202ENST00000395066 FOLR3P41439 243 aa17.75■□□□□ 0.43
CLK3-202ENST00000395066 RPS10P46783 165 aaKnown RBP17.75■□□□□ 0.43
CLK3-202ENST00000395066 SPIN3Q5JUX0 258 aa17.75■□□□□ 0.43
CLK3-202ENST00000395066 NTNG2Q96CW9 530 aa17.75■□□□□ 0.43
CLK3-202ENST00000395066 SMDT1Q9H4I9 107 aa17.75■□□□□ 0.43
CLK3-202ENST00000395066 GPR35Q9HC97 309 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms