RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 B9A039 149 aa8.88□□□□□ -0.99
COL5A1-202ENST00000371820 CRLF1O75462 422 aa8.88□□□□□ -0.99
COL5A1-202ENST00000371820 FARS2O95363 451 aaKnown RBP8.88□□□□□ -0.99
COL5A1-202ENST00000371820 SIX6O95475 246 aa8.88□□□□□ -0.99
COL5A1-202ENST00000371820 GPANK1O95872 356 aa8.88□□□□□ -0.99
COL5A1-202ENST00000371820 RLN2P04090 185 aa8.88□□□□□ -0.99
COL5A1-202ENST00000371820 RPS27P42677 84 aaKnown RBP8.88□□□□□ -0.99
COL5A1-202ENST00000371820 QRFPP83859 136 aa8.88□□□□□ -0.99
COL5A1-202ENST00000371820 DBPQ10586 325 aaPredicted RBP8.88□□□□□ -0.99
COL5A1-202ENST00000371820 TUSC1Q2TAM9 212 aa8.88□□□□□ -0.99
COL5A1-202ENST00000371820 NKAPLQ5M9Q1 402 aa8.88□□□□□ -0.99
COL5A1-202ENST00000371820 ALKAL2Q6UX46 152 aa8.88□□□□□ -0.99
COL5A1-202ENST00000371820 DPPA2Q7Z7J5 298 aa8.88□□□□□ -0.99
COL5A1-202ENST00000371820 HOGA1Q86XE5 327 aa8.88□□□□□ -0.99
COL5A1-202ENST00000371820 NUP37Q8NFH4 326 aa8.88□□□□□ -0.99
COL5A1-202ENST00000371820 OR4D10Q8NGI6 311 aa8.88□□□□□ -0.99
COL5A1-202ENST00000371820 OR13C8Q8NGS7 320 aa8.88□□□□□ -0.99
COL5A1-202ENST00000371820 OR10K1Q8NGX5 313 aa8.88□□□□□ -0.99
COL5A1-202ENST00000371820 STOML3Q8TAV4 291 aa8.88□□□□□ -0.99
COL5A1-202ENST00000371820 EMG1Q92979 244 aaKnown RBP8.88□□□□□ -0.99
COL5A1-202ENST00000371820 DVL3Q92997 716 aaPredicted RBP8.88□□□□□ -0.99
COL5A1-202ENST00000371820 RAB3CQ96E17 227 aa8.88□□□□□ -0.99
COL5A1-202ENST00000371820 SAT2Q96F10 170 aaPredicted RBP8.88□□□□□ -0.99
COL5A1-202ENST00000371820 CHST6Q9GZX3 395 aa8.88□□□□□ -0.99
COL5A1-202ENST00000371820 ZNF442Q9H7R0 627 aa8.88□□□□□ -0.99
COL5A1-202ENST00000371820 MBD2Q9UBB5 411 aa8.88□□□□□ -0.99
COL5A1-202ENST00000371820 GPR132Q9UNW8 380 aa8.88□□□□□ -0.99
COL5A1-202ENST00000371820 MRPS28Q9Y2Q9 187 aaKnown RBP8.88□□□□□ -0.99
COL5A1-202ENST00000371820 CHD3Q12873 2000 aaKnown RBP8.88□□□□□ -0.99
COL5A1-202ENST00000371820 TEX13DA0A0J9YY54 714 aaPredicted RBP8.87□□□□□ -0.99
COL5A1-202ENST00000371820 C5orf51A6NDU8 294 aa8.87□□□□□ -0.99
COL5A1-202ENST00000371820 DBX1A6NMT0 343 aa8.87□□□□□ -0.99
COL5A1-202ENST00000371820 OR2AT4A6NND4 320 aa8.87□□□□□ -0.99
COL5A1-202ENST00000371820 RNF223E7ERA6 249 aa8.87□□□□□ -0.99
COL5A1-202ENST00000371820 F5H0A9 414 aaPredicted RBP8.87□□□□□ -0.99
COL5A1-202ENST00000371820 M0QYG6 137 aa8.87□□□□□ -0.99
COL5A1-202ENST00000371820 SFT2D2O95562 160 aa8.87□□□□□ -0.99
COL5A1-202ENST00000371820 PGA4P0DJD7 388 aa8.87□□□□□ -0.99
COL5A1-202ENST00000371820 PGA3P0DJD8 388 aa8.87□□□□□ -0.99
COL5A1-202ENST00000371820 VSIG8P0DPA2 414 aa8.87□□□□□ -0.99
COL5A1-202ENST00000371820 NAT2P11245 290 aa8.87□□□□□ -0.99
COL5A1-202ENST00000371820 CD79AP11912 226 aa8.87□□□□□ -0.99
COL5A1-202ENST00000371820 FPR2P25090 351 aa8.87□□□□□ -0.99
COL5A1-202ENST00000371820 SERPINF1P36955 418 aa8.87□□□□□ -0.99
COL5A1-202ENST00000371820 ZNF84P51523 738 aa8.87□□□□□ -0.99
COL5A1-202ENST00000371820 ZNF133P52736 654 aaPredicted RBP8.87□□□□□ -0.99
COL5A1-202ENST00000371820 EFNA4P52798 201 aa8.87□□□□□ -0.99
COL5A1-202ENST00000371820 PLA2G7Q13093 441 aa8.87□□□□□ -0.99
COL5A1-202ENST00000371820 EFNB3Q15768 340 aa8.87□□□□□ -0.99
COL5A1-202ENST00000371820 HIST3H3Q16695 136 aa8.87□□□□□ -0.99
COL5A1-202ENST00000371820 NRN1LQ496H8 165 aa8.87□□□□□ -0.99
COL5A1-202ENST00000371820 LY6G6FQ5SQ64 297 aa8.87□□□□□ -0.99
COL5A1-202ENST00000371820 ASPHD2Q6ICH7 369 aa8.87□□□□□ -0.99
COL5A1-202ENST00000371820 Q6ZSR3 168 aa8.87□□□□□ -0.99
COL5A1-202ENST00000371820 MDP1Q86V88 176 aa8.87□□□□□ -0.99
COL5A1-202ENST00000371820 PAQR4Q8N4S7 273 aaPredicted RBP8.87□□□□□ -0.99
COL5A1-202ENST00000371820 FAM89BQ8N5H3 189 aa8.87□□□□□ -0.99
COL5A1-202ENST00000371820 OR4D6Q8NGJ1 314 aa8.87□□□□□ -0.99
COL5A1-202ENST00000371820 OR1J2Q8NGS2 313 aa8.87□□□□□ -0.99
COL5A1-202ENST00000371820 OR5H2Q8NGV7 314 aa8.87□□□□□ -0.99
COL5A1-202ENST00000371820 OR1S1Q8NH92 325 aa8.87□□□□□ -0.99
COL5A1-202ENST00000371820 SPATA3Q8NHX4 192 aa8.87□□□□□ -0.99
COL5A1-202ENST00000371820 PPP1R1CQ8WVI7 109 aa8.87□□□□□ -0.99
COL5A1-202ENST00000371820 TMEM54Q969K7 222 aa8.87□□□□□ -0.99
COL5A1-202ENST00000371820 FBXO17Q96EF6 278 aa8.87□□□□□ -0.99
COL5A1-202ENST00000371820 GPER1Q99527 375 aa8.87□□□□□ -0.99
COL5A1-202ENST00000371820 ZNF471Q9BX82 626 aaPredicted RBP8.87□□□□□ -0.99
COL5A1-202ENST00000371820 OR10A2Q9H208 303 aa8.87□□□□□ -0.99
COL5A1-202ENST00000371820 SEC61A2Q9H9S3 476 aa8.87□□□□□ -0.99
COL5A1-202ENST00000371820 CHMP1AQ9HD42 196 aaPredicted RBP8.87□□□□□ -0.99
COL5A1-202ENST00000371820 POMT1Q9Y6A1 747 aa8.87□□□□□ -0.99
COL5A1-202ENST00000371820 STAB1Q9NY15 2570 aa8.87□□□□□ -0.99
COL5A1-202ENST00000371820 CR1P17927 2039 aa8.87□□□□□ -0.99
COL5A1-202ENST00000371820 FBN1P35555 2871 aaKnown RBP8.87□□□□□ -0.99
COL5A1-202ENST00000371820 TRAV14DV4A0A0A6YYC5 116 aa8.86□□□□□ -0.99
COL5A1-202ENST00000371820 MEIS3P1A6NDR6 274 aa8.86□□□□□ -0.99
COL5A1-202ENST00000371820 TMEM235A6NFC5 223 aa8.86□□□□□ -0.99
COL5A1-202ENST00000371820 F8VVB4 439 aa8.86□□□□□ -0.99
COL5A1-202ENST00000371820 F8VWA3 439 aa8.86□□□□□ -0.99
COL5A1-202ENST00000371820 TPD52L2O43399 206 aaKnown RBP8.86□□□□□ -0.99
COL5A1-202ENST00000371820 TSPAN9O75954 239 aa8.86□□□□□ -0.99
COL5A1-202ENST00000371820 SPDEFO95238 335 aa8.86□□□□□ -0.99
COL5A1-202ENST00000371820 HCKP08631 526 aa8.86□□□□□ -0.99
COL5A1-202ENST00000371820 LYL1P12980 280 aa8.86□□□□□ -0.99
COL5A1-202ENST00000371820 B4GALT1P15291 398 aa8.86□□□□□ -0.99
COL5A1-202ENST00000371820 SLC25A16P16260 332 aa8.86□□□□□ -0.99
COL5A1-202ENST00000371820 HIST1H1DP16402 221 aaKnown RBP8.86□□□□□ -0.99
COL5A1-202ENST00000371820 CTRB1P17538 263 aa8.86□□□□□ -0.99
COL5A1-202ENST00000371820 RPS23P62266 143 aaKnown RBP8.86□□□□□ -0.99
COL5A1-202ENST00000371820 BLOC1S1P78537 153 aa8.86□□□□□ -0.99
COL5A1-202ENST00000371820 ARFRP1Q13795 201 aa8.86□□□□□ -0.99
COL5A1-202ENST00000371820 C2orf68Q2NKX9 166 aa8.86□□□□□ -0.99
COL5A1-202ENST00000371820 PHYHD1Q5SRE7 291 aa8.86□□□□□ -0.99
COL5A1-202ENST00000371820 DCAF12L2Q5VW00 463 aa8.86□□□□□ -0.99
COL5A1-202ENST00000371820 CTRB2Q6GPI1 263 aa8.86□□□□□ -0.99
COL5A1-202ENST00000371820 PRSS54Q6PEW0 395 aa8.86□□□□□ -0.99
COL5A1-202ENST00000371820 VHLLQ6RSH7 139 aa8.86□□□□□ -0.99
COL5A1-202ENST00000371820 GLIPR1L1Q6UWM5 242 aa8.86□□□□□ -0.99
COL5A1-202ENST00000371820 DRAM2Q6UX65 266 aa8.86□□□□□ -0.99
COL5A1-202ENST00000371820 IL34Q6ZMJ4 242 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms