RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 SIP14410 1827 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 SIGLEC1Q9BZZ2 1709 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 H3BP45 60 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 CDKN2AP42771 156 aaKnown RBP5.53□□□□□ -1.52
VCAN-203ENST00000343200 CRYBB2P43320 205 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 PKDCCQ504Y2 493 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 SH2D5Q6ZV89 423 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 ETFBKMTQ8IXQ9 262 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 BOD1Q96IK1 185 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 TMEM56Q96MV1 263 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 WDR92Q96MX6 357 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 TXNDC17Q9BRA2 123 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 WDR83Q9BRX9 315 aaKnown RBP5.53□□□□□ -1.52
VCAN-203ENST00000343200 MIXL1Q9H2W2 232 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 CPAMD8Q8IZJ3 1885 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 TMEM88BA6NKF7 163 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 SYNGR2O43760 224 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 GLULP15104 373 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 BTG2P78543 158 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 EDDM3AQ14507 147 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 LBX2Q6XYB7 198 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 LPAR4Q99677 370 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 MOSPD3O75425 235 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 WNT1P04628 370 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 OPRM1P35372 400 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 SPNS3Q6ZMD2 512 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 USP50Q70EL3 339 aaPredicted RBP5.52□□□□□ -1.53
VCAN-203ENST00000343200 CNEP1R1Q8N9A8 125 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 MOB3AQ96BX8 217 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 WNT16Q9UBV4 365 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 FNDC1Q4ZHG4 1894 aaPredicted RBP5.52□□□□□ -1.53
VCAN-203ENST00000343200 LOC389332A0A1B0GUA5 103 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 SELENOPP49908 381 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 MFAP2P55001 183 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 NR2C2APQ86WQ0 139 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 LINC00116Q8NCU8 138 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 MAP1LC3AQ9H492 121 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 KBTBD11-OT1A0A1B0GTJ5 212 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 WNT11O96014 354 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 CST5P28325 142 aaPredicted RBP5.52□□□□□ -1.53
VCAN-203ENST00000343200 AQP6Q13520 282 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 NBPF12Q5TAG4 269 aaPredicted RBP5.52□□□□□ -1.53
VCAN-203ENST00000343200 DEGS2Q6QHC5 323 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 NPWQ8N729 165 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 ZNF414Q96IQ9 312 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 ICAM5Q9UMF0 924 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 LDB3O75112 727 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 CXCL3P19876 107 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 AVPR2P30518 371 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 GLIPR1P48060 266 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 CDK5R1Q15078 307 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 DUSP5Q16690 384 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 C10orf128Q5T292 105 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 C1orf185Q5T7R7 199 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 NUFIP2Q7Z417 695 aaKnown RBP5.52□□□□□ -1.53
VCAN-203ENST00000343200 LINC00346Q8IVM7 164 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 BATF2Q8N1L9 274 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 ORAOV1Q8WV07 137 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 CFIP05156 583 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 PI3P19957 117 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 PMVKQ15126 192 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 POU2AF1Q16633 256 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 FAM163AQ96GL9 167 aaPredicted RBP5.52□□□□□ -1.53
VCAN-203ENST00000343200 CMC2Q9NRP2 79 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 HSPB7Q9UBY9 170 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 KCNE5Q9UJ90 142 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 MANSC4A6NHS7 340 aaPredicted RBP5.52□□□□□ -1.53
VCAN-203ENST00000343200 EFSO43281 561 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 GSTZ1O43708 216 aaPredicted RBP5.52□□□□□ -1.53
VCAN-203ENST00000343200 CTAG2O75638 210 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 IGF2P01344 180 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 MAMSTRQ6ZN01 415 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 CA13Q8N1Q1 262 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 PELI3Q8N2H9 469 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 PP6455Q8WZ26 134 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 RND1Q92730 232 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 NDUFAF3Q9BU61 184 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 PGPEP1Q9NXJ5 209 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 AUP1Q9Y679 476 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 SNHG28P0DPA3 235 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 EXOSC7Q15024 291 aaKnown RBP5.52□□□□□ -1.53
VCAN-203ENST00000343200 TMEM215Q68D42 235 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 NHLRC1Q6VVB1 395 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 DNM1P46Q6ZS02 220 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 OR10S1Q8NGN2 331 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 IKZF4Q9H2S9 585 aa5.52□□□□□ -1.53
VCAN-203ENST00000343200 J3QR06 171 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 CSNK1DP48730 415 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 PELI1Q96FA3 418 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 RBM38Q9H0Z9 239 aaKnown RBP5.51□□□□□ -1.53
VCAN-203ENST00000343200 WNT5BQ9H1J7 359 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 A0A0J9YY10 115 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 A8MWL6 223 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 TMPRSS11DO60235 418 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 COX20Q5RI15 118 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 RBM45Q8IUH3 476 aaKnown RBP5.51□□□□□ -1.53
VCAN-203ENST00000343200 ISG20L2Q9H9L3 353 aaKnown RBP5.51□□□□□ -1.53
VCAN-203ENST00000343200 TRAV8-1A0A0A6YYK1 113 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 GAPDHP04406 335 aaKnown RBP5.51□□□□□ -1.53
VCAN-203ENST00000343200 GLI4P10075 376 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms