RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 OR4D6Q8NGJ1 314 aa10.9□□□□□ -0.66
DDX39A-202ENST00000324340 KLF14Q8TD94 323 aaPredicted RBP10.9□□□□□ -0.66
DDX39A-202ENST00000324340 FAM3DQ96BQ1 224 aa10.9□□□□□ -0.66
DDX39A-202ENST00000324340 CMBLQ96DG6 245 aa10.9□□□□□ -0.66
DDX39A-202ENST00000324340 SLC25A38Q96DW6 304 aa10.9□□□□□ -0.66
DDX39A-202ENST00000324340 CMSS1Q9BQ75 279 aaKnown RBP10.9□□□□□ -0.66
DDX39A-202ENST00000324340 PAPOLGQ9BWT3 736 aaKnown RBP10.9□□□□□ -0.66
DDX39A-202ENST00000324340 GPR173Q9NS66 373 aa10.9□□□□□ -0.66
DDX39A-202ENST00000324340 COMMD9Q9P000 198 aa10.9□□□□□ -0.66
DDX39A-202ENST00000324340 MRPL15Q9P015 296 aaKnown RBP10.9□□□□□ -0.66
DDX39A-202ENST00000324340 MIOXQ9UGB7 285 aa10.9□□□□□ -0.66
DDX39A-202ENST00000324340 NBEAQ8NFP9 2946 aa10.9□□□□□ -0.66
DDX39A-202ENST00000324340 TRAV14DV4A0A0A6YYC5 116 aa10.9□□□□□ -0.67
DDX39A-202ENST00000324340 LOC100289279A0A1B0GTE1 492 aa10.9□□□□□ -0.67
DDX39A-202ENST00000324340 DPRXA6NFQ7 191 aa10.9□□□□□ -0.67
DDX39A-202ENST00000324340 COLCA2A8K830 154 aa10.9□□□□□ -0.67
DDX39A-202ENST00000324340 LDLRAD4O15165 306 aa10.9□□□□□ -0.67
DDX39A-202ENST00000324340 C1QL1O75973 258 aa10.9□□□□□ -0.67
DDX39A-202ENST00000324340 MT-ND4LP03901 98 aa10.9□□□□□ -0.67
DDX39A-202ENST00000324340 AKAIN1P0CW23 69 aa10.9□□□□□ -0.67
DDX39A-202ENST00000324340 RCC1P18754 421 aaPredicted RBP10.9□□□□□ -0.67
DDX39A-202ENST00000324340 KITLGP21583 273 aa10.9□□□□□ -0.67
DDX39A-202ENST00000324340 GLRXP35754 106 aa10.9□□□□□ -0.67
DDX39A-202ENST00000324340 PSG7Q13046 419 aa10.9□□□□□ -0.67
DDX39A-202ENST00000324340 CEACAM21Q3KPI0 293 aa10.9□□□□□ -0.67
DDX39A-202ENST00000324340 OR2T2Q6IF00 324 aa10.9□□□□□ -0.67
DDX39A-202ENST00000324340 C11orf87Q6NUJ2 197 aa10.9□□□□□ -0.67
DDX39A-202ENST00000324340 RNF144BQ7Z419 303 aa10.9□□□□□ -0.67
DDX39A-202ENST00000324340 ZNF843Q8N446 348 aa10.9□□□□□ -0.67
DDX39A-202ENST00000324340 NUP37Q8NFH4 326 aa10.9□□□□□ -0.67
DDX39A-202ENST00000324340 OR51D1Q8NGF3 324 aa10.9□□□□□ -0.67
DDX39A-202ENST00000324340 RNF141Q8WVD5 230 aa10.9□□□□□ -0.67
DDX39A-202ENST00000324340 ITLN2Q8WWU7 325 aaPredicted RBP10.9□□□□□ -0.67
DDX39A-202ENST00000324340 PIGCQ92535 297 aa10.9□□□□□ -0.67
DDX39A-202ENST00000324340 PTX4Q96A99 478 aa10.9□□□□□ -0.67
DDX39A-202ENST00000324340 CPNE2Q96FN4 548 aaPredicted RBP10.9□□□□□ -0.67
DDX39A-202ENST00000324340 NGBQ9NPG2 151 aa10.9□□□□□ -0.67
DDX39A-202ENST00000324340 CRIM1Q9NZV1 1036 aa10.9□□□□□ -0.67
DDX39A-202ENST00000324340 FBLN5Q9UBX5 448 aa10.9□□□□□ -0.67
DDX39A-202ENST00000324340 MPC1Q9Y5U8 109 aa10.9□□□□□ -0.67
DDX39A-202ENST00000324340 MYO7BQ6PIF6 2116 aa10.89□□□□□ -0.67
DDX39A-202ENST00000324340 BAHCC1Q9P281 2608 aa10.89□□□□□ -0.67
DDX39A-202ENST00000324340 ANKRD30BLA7E2S9 258 aa10.89□□□□□ -0.67
DDX39A-202ENST00000324340 ZNF850A8MQ14 1090 aa10.89□□□□□ -0.67
DDX39A-202ENST00000324340 XRCC3O43542 346 aa10.89□□□□□ -0.67
DDX39A-202ENST00000324340 BPNT1O95861 308 aa10.89□□□□□ -0.67
DDX39A-202ENST00000324340 PRB1P04280 392 aa10.89□□□□□ -0.67
DDX39A-202ENST00000324340 MPV17P39210 176 aa10.89□□□□□ -0.67
DDX39A-202ENST00000324340 POU3F4P49335 361 aa10.89□□□□□ -0.67
DDX39A-202ENST00000324340 RBP2P50120 134 aa10.89□□□□□ -0.67
DDX39A-202ENST00000324340 FUT6P51993 359 aa10.89□□□□□ -0.67
DDX39A-202ENST00000324340 ARHGDIBP52566 201 aa10.89□□□□□ -0.67
DDX39A-202ENST00000324340 TAS2R20P59543 309 aa10.89□□□□□ -0.67
DDX39A-202ENST00000324340 PJVKQ0ZLH3 352 aa10.89□□□□□ -0.67
DDX39A-202ENST00000324340 PRDX4Q13162 271 aa10.89□□□□□ -0.67
DDX39A-202ENST00000324340 C2orf76Q3KRA6 126 aa10.89□□□□□ -0.67
DDX39A-202ENST00000324340 ZNF718Q3SXZ3 478 aa10.89□□□□□ -0.67
DDX39A-202ENST00000324340 RNASE12Q5GAN4 147 aaKnown RBP10.89□□□□□ -0.67
DDX39A-202ENST00000324340 C11orf88Q6PI97 169 aa10.89□□□□□ -0.67
DDX39A-202ENST00000324340 LHFPL2Q6ZUX7 228 aa10.89□□□□□ -0.67
DDX39A-202ENST00000324340 WFDC8Q8IUA0 241 aa10.89□□□□□ -0.67
DDX39A-202ENST00000324340 ZDHHC23Q8IYP9 409 aa10.89□□□□□ -0.67
DDX39A-202ENST00000324340 MUC20Q8N307 709 aaPredicted RBP10.89□□□□□ -0.67
DDX39A-202ENST00000324340 OR5M8Q8NGP6 311 aa10.89□□□□□ -0.67
DDX39A-202ENST00000324340 HPSE2Q8WWQ2 592 aa10.89□□□□□ -0.67
DDX39A-202ENST00000324340 C1orf147Q96MC9 270 aaPredicted RBP10.89□□□□□ -0.67
DDX39A-202ENST00000324340 SPACA5Q96QH8 159 aa10.89□□□□□ -0.67
DDX39A-202ENST00000324340 NKX3-1Q99801 234 aaPredicted RBP10.89□□□□□ -0.67
DDX39A-202ENST00000324340 OCSTAMPQ9BR26 566 aa10.89□□□□□ -0.67
DDX39A-202ENST00000324340 GHRLQ9UBU3 117 aa10.89□□□□□ -0.67
DDX39A-202ENST00000324340 SLC7A11Q9UPY5 501 aa10.89□□□□□ -0.67
DDX39A-202ENST00000324340 COL6A6A6NMZ7 2263 aa10.88□□□□□ -0.67
DDX39A-202ENST00000324340 IGKV1-27A0A075B6S5 117 aa10.88□□□□□ -0.67
DDX39A-202ENST00000324340 TMEM272A0A1B0GTI8 110 aa10.88□□□□□ -0.67
DDX39A-202ENST00000324340 A0A1B0GWJ7 208 aa10.88□□□□□ -0.67
DDX39A-202ENST00000324340 METTL21EPA6NDL7 271 aa10.88□□□□□ -0.67
DDX39A-202ENST00000324340 DBX1A6NMT0 343 aa10.88□□□□□ -0.67
DDX39A-202ENST00000324340 LILRA1O75019 489 aa10.88□□□□□ -0.67
DDX39A-202ENST00000324340 CLDN14O95500 239 aa10.88□□□□□ -0.67
DDX39A-202ENST00000324340 IFNA10P01566 189 aa10.88□□□□□ -0.67
DDX39A-202ENST00000324340 IGHV2-5P01817 119 aa10.88□□□□□ -0.67
DDX39A-202ENST00000324340 ADCYAP1P18509 176 aa10.88□□□□□ -0.67
DDX39A-202ENST00000324340 RPS23P62266 143 aaKnown RBP10.88□□□□□ -0.67
DDX39A-202ENST00000324340 SNRPEP62304 92 aaKnown RBP10.88□□□□□ -0.67
DDX39A-202ENST00000324340 EIF5AP63241 154 aaKnown RBP10.88□□□□□ -0.67
DDX39A-202ENST00000324340 QRFPP83859 136 aa10.88□□□□□ -0.67
DDX39A-202ENST00000324340 DMRTC1Q5HYR2 192 aa10.88□□□□□ -0.67
DDX39A-202ENST00000324340 FAM74A1Q5RGS3 127 aa10.88□□□□□ -0.67
DDX39A-202ENST00000324340 PLCXD3Q63HM9 321 aa10.88□□□□□ -0.67
DDX39A-202ENST00000324340 AWAT2Q6E213 333 aa10.88□□□□□ -0.67
DDX39A-202ENST00000324340 ALKBH2Q6NS38 261 aa10.88□□□□□ -0.67
DDX39A-202ENST00000324340 CBLN2Q8IUK8 224 aa10.88□□□□□ -0.67
DDX39A-202ENST00000324340 PNLDC1Q8NA58 520 aaKnown RBP10.88□□□□□ -0.67
DDX39A-202ENST00000324340 OR5A2Q8NGI9 324 aa10.88□□□□□ -0.67
DDX39A-202ENST00000324340 OR1S2Q8NGQ3 325 aa10.88□□□□□ -0.67
DDX39A-202ENST00000324340 NPRL2Q8WTW4 380 aa10.88□□□□□ -0.67
DDX39A-202ENST00000324340 TMEM171Q8WVE6 324 aa10.88□□□□□ -0.67
DDX39A-202ENST00000324340 OR5P3Q8WZ94 311 aa10.88□□□□□ -0.67
DDX39A-202ENST00000324340 BORCS8Q96FH0 119 aa10.88□□□□□ -0.67
DDX39A-202ENST00000324340 WDR89Q96FK6 387 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms