RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 MEP1BQ16820 701 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 TRIM16LQ309B1 348 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 Q499Y3 187 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 IDNKQ5T6J7 187 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 BCL2L15Q5TBC7 163 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 TMEM244Q5VVB8 128 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 LIPNQ5VXI9 398 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 METAP1DQ6UB28 335 aaPredicted RBP3.95□□□□□ -1.78
VPS29-212ENST00000621131 FAM131AQ6UXB0 335 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 C1orf122Q6ZSJ8 110 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 FCRLAQ7L513 359 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 SSX6Q7RTT6 188 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 AAED1Q7RTV5 226 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 P4HA3Q7Z4N8 544 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 GALNTL5Q7Z4T8 443 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 DCXRQ7Z4W1 244 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 VASH2Q86V25 355 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 KDM8Q8N371 416 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 SLC26A10Q8NG04 563 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 OR10D3Q8NH80 312 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 C11orf45Q8TAV5 145 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 GPR148Q8TDV2 347 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 C15orf40Q8WUR7 153 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 PSMF1Q92530 271 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 HAS2Q92819 552 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 SPTSSAQ969W0 71 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 NTNG2Q96CW9 530 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 DIRAS2Q96HU8 199 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 SIGLEC12Q96PQ1 595 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 ZNF649Q9BS31 505 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 EMC6Q9BV81 110 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 RNF167Q9H6Y7 350 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 ELOVL3Q9HB03 270 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 PROK2Q9HC23 129 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 NEK6Q9HC98 313 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 GLTPQ9NZD2 209 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 ABRACLQ9P1F3 81 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 MRM2Q9UI43 246 aaKnown RBP3.95□□□□□ -1.78
VPS29-212ENST00000621131 COPS3Q9UNS2 423 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 R4GMQ9 66 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 HEATR5AQ86XA9 2040 aa3.95□□□□□ -1.78
VPS29-212ENST00000621131 A0A087WV48 116 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 TRGV5A0A0B4J1U4 118 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 IGHV3-15A0A0B4J1V0 119 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 A0A0G2JMM0 328 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 A0A0J9YW62 118 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 A0A1B0GVI7 797 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 A0A1W2PPB8 328 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 A0A1W2PRS3 328 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 TRABD2BA6NFA1 517 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 ACOD1A6NK06 481 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 KIR3DP1A8MWS1 328 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 DCTN6O00399 190 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 MAGEB3O15480 346 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 LRRTM2O43300 516 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 CYTIPO60759 359 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 MRPL33O75394 65 aaKnown RBP3.94□□□□□ -1.78
VPS29-212ENST00000621131 LALBAP00709 142 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 IGHV2-70P01814 119 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 ERCC1P07992 297 aaPredicted RBP3.94□□□□□ -1.78
VPS29-212ENST00000621131 UCHL1P09936 223 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 OCMP0CE72 109 aaPredicted RBP3.94□□□□□ -1.78
VPS29-212ENST00000621131 ZNF24P17028 368 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 ACHEP22303 614 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 ETV6P41212 452 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 MAGEA5P43359 124 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 HCCSP53701 268 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 CLDN15P56746 228 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 LSM6P62312 80 aaKnown RBP3.94□□□□□ -1.78
VPS29-212ENST00000621131 PITPNAQ00169 270 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 SRYQ05066 204 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 FMODQ06828 376 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 SCRN3Q0VDG4 424 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 ECH1Q13011 328 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 IL18Q14116 193 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 STK11Q15831 433 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 SGCAQ16586 387 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 HYAL4Q2M3T9 481 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 DEFB109BQ30KR1 87 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 PYDC2Q56P42 97 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 C10orf128Q5T292 105 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 TRIQKQ629K1 86 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 GLT8D1Q68CQ7 371 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 SFXN4Q6P4A7 337 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 XKRXQ6PP77 449 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 LRRC28Q86X40 367 aaPredicted RBP3.94□□□□□ -1.78
VPS29-212ENST00000621131 LINC00346Q8IVM7 164 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 OR8H2Q8N162 312 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 TMEM251Q8N6I4 163 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 ZNF433Q8N7K0 673 aaPredicted RBP3.94□□□□□ -1.78
VPS29-212ENST00000621131 ZNF283Q8N7M2 679 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 POM121L12Q8N7R1 296 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 GDPD1Q8N9F7 314 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 MDS2Q8NDY4 140 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 C19orf18Q8NEA5 215 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 CCDC54Q8NEL0 328 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 OR2G2Q8NGZ5 317 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 ZNF671Q8TAW3 534 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 SETD6Q8TBK2 473 aa3.94□□□□□ -1.78
VPS29-212ENST00000621131 C11orf40Q8WZ69 217 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms