RNA–Protein interactions for RNA: ENST00000617445.4

CCDC28A-203, Transcript of coiled-coil domain containing 28A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28A, Length 1,240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-203ENST00000617445 DUSP1P28562 367 aa15.42■□□□□ 0.06
CCDC28A-203ENST00000617445 GBX2P52951 348 aaPredicted RBP15.42■□□□□ 0.06
CCDC28A-203ENST00000617445 P2RX3P56373 397 aa15.42■□□□□ 0.06
CCDC28A-203ENST00000617445 DYNC1I2Q13409 638 aaKnown RBP15.42■□□□□ 0.06
CCDC28A-203ENST00000617445 FAM189A2Q15884 450 aa15.42■□□□□ 0.06
CCDC28A-203ENST00000617445 OR52W1Q6IF63 320 aa15.42■□□□□ 0.06
CCDC28A-203ENST00000617445 TCF23Q7RTU1 214 aa15.42■□□□□ 0.06
CCDC28A-203ENST00000617445 PARP16Q8N5Y8 322 aa15.42■□□□□ 0.06
CCDC28A-203ENST00000617445 CHST4Q8NCG5 386 aa15.42■□□□□ 0.06
CCDC28A-203ENST00000617445 OR4S1Q8NGB4 309 aa15.42■□□□□ 0.06
CCDC28A-203ENST00000617445 OR13C9Q8NGT0 318 aa15.42■□□□□ 0.06
CCDC28A-203ENST00000617445 OR10AC1Q8NH08 325 aa15.42■□□□□ 0.06
CCDC28A-203ENST00000617445 OR5AK2Q8NH90 309 aa15.42■□□□□ 0.06
CCDC28A-203ENST00000617445 CPNE2Q96FN4 548 aaPredicted RBP15.42■□□□□ 0.06
CCDC28A-203ENST00000617445 SLC29A1Q99808 456 aa15.42■□□□□ 0.06
CCDC28A-203ENST00000617445 CHST6Q9GZX3 395 aa15.42■□□□□ 0.06
CCDC28A-203ENST00000617445 TMEM133Q9H2Q1 129 aa15.42■□□□□ 0.06
CCDC28A-203ENST00000617445 GAL3ST2Q9H3Q3 398 aa15.42■□□□□ 0.06
CCDC28A-203ENST00000617445 FAM118AQ9NWS6 357 aa15.42■□□□□ 0.06
CCDC28A-203ENST00000617445 IL36RNQ9UBH0 155 aa15.42■□□□□ 0.06
CCDC28A-203ENST00000617445 AASSQ9UDR5 926 aa15.42■□□□□ 0.06
CCDC28A-203ENST00000617445 TCF19Q9Y242 345 aa15.42■□□□□ 0.06
CCDC28A-203ENST00000617445 MYRFQ9Y2G1 1151 aa15.42■□□□□ 0.06
CCDC28A-203ENST00000617445 GSTK1Q9Y2Q3 226 aa15.42■□□□□ 0.06
CCDC28A-203ENST00000617445 OR3A1P47881 315 aa15.41■□□□□ 0.06
CCDC28A-203ENST00000617445 SSX2Q16385 188 aa15.41■□□□□ 0.06
CCDC28A-203ENST00000617445 LPCAT4Q643R3 524 aa15.41■□□□□ 0.06
CCDC28A-203ENST00000617445 TRAPPC6BQ86SZ2 158 aa15.41■□□□□ 0.06
CCDC28A-203ENST00000617445 CORO2AQ92828 525 aa15.41■□□□□ 0.06
CCDC28A-203ENST00000617445 RDH12Q96NR8 316 aa15.41■□□□□ 0.06
CCDC28A-203ENST00000617445 ZNF649Q9BS31 505 aa15.41■□□□□ 0.06
CCDC28A-203ENST00000617445 CLEC7AQ9BXN2 247 aa15.41■□□□□ 0.06
CCDC28A-203ENST00000617445 TAS2R3Q9NYW6 316 aa15.41■□□□□ 0.06
CCDC28A-203ENST00000617445 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.41■□□□□ 0.06
CCDC28A-203ENST00000617445 TRGV10A0A0A0MS01 117 aa15.4■□□□□ 0.06
CCDC28A-203ENST00000617445 IGHV2-26A0A0B4J1V2 119 aa15.4■□□□□ 0.06
CCDC28A-203ENST00000617445 IGKV1-12A0A0C4DH73 117 aa15.4■□□□□ 0.06
CCDC28A-203ENST00000617445 SULT1B1O43704 296 aa15.4■□□□□ 0.06
CCDC28A-203ENST00000617445 ZFPL1O95159 310 aa15.4■□□□□ 0.06
CCDC28A-203ENST00000617445 OR2H2O95918 312 aa15.4■□□□□ 0.06
CCDC28A-203ENST00000617445 IGKV1D-12P01611 117 aa15.4■□□□□ 0.06
CCDC28A-203ENST00000617445 CSN2P05814 226 aa15.4■□□□□ 0.06
CCDC28A-203ENST00000617445 CSF1P09603 554 aa15.4■□□□□ 0.06
CCDC28A-203ENST00000617445 PAX6P26367 422 aa15.4■□□□□ 0.06
CCDC28A-203ENST00000617445 PDLIM3Q53GG5 364 aaPredicted RBP15.4■□□□□ 0.06
CCDC28A-203ENST00000617445 RTN4RL2Q86UN3 420 aa15.4■□□□□ 0.06
CCDC28A-203ENST00000617445 DYNAPQ8N1N2 210 aa15.4■□□□□ 0.06
CCDC28A-203ENST00000617445 Q8N2B8 174 aa15.4■□□□□ 0.06
CCDC28A-203ENST00000617445 TPRX1Q8N7U7 411 aa15.4■□□□□ 0.06
CCDC28A-203ENST00000617445 CFHR4Q92496 578 aa15.4■□□□□ 0.06
CCDC28A-203ENST00000617445 RFT1Q96AA3 541 aa15.4■□□□□ 0.06
CCDC28A-203ENST00000617445 JAM3Q9BX67 310 aa15.4■□□□□ 0.06
CCDC28A-203ENST00000617445 ISG20L2Q9H9L3 353 aaKnown RBP15.4■□□□□ 0.06
CCDC28A-203ENST00000617445 AMBNQ9NP70 447 aa15.4■□□□□ 0.06
CCDC28A-203ENST00000617445 MEX3AA1L020 520 aaKnown RBP15.39■□□□□ 0.05
CCDC28A-203ENST00000617445 A6NDX4 124 aa15.39■□□□□ 0.05
CCDC28A-203ENST00000617445 SIRPB1O00241 398 aa15.39■□□□□ 0.05
CCDC28A-203ENST00000617445 CHST1O43916 411 aa15.39■□□□□ 0.05
CCDC28A-203ENST00000617445 HCKP08631 526 aa15.39■□□□□ 0.05
CCDC28A-203ENST00000617445 TMEM225BP0DP42 221 aa15.39■□□□□ 0.05
CCDC28A-203ENST00000617445 IL18R1Q13478 541 aa15.39■□□□□ 0.05
CCDC28A-203ENST00000617445 KISS1Q15726 138 aa15.39■□□□□ 0.05
CCDC28A-203ENST00000617445 HEPN1Q6WQI6 88 aa15.39■□□□□ 0.05
CCDC28A-203ENST00000617445 ZNF555Q8NEP9 628 aa15.39■□□□□ 0.05
CCDC28A-203ENST00000617445 OR52I1Q8NGK6 324 aa15.39■□□□□ 0.05
CCDC28A-203ENST00000617445 SPACA5Q96QH8 159 aa15.39■□□□□ 0.05
CCDC28A-203ENST00000617445 DHDHQ9UQ10 334 aa15.39■□□□□ 0.05
CCDC28A-203ENST00000617445 SIGLEC9Q9Y336 463 aa15.39■□□□□ 0.05
CCDC28A-203ENST00000617445 A0A0G2JK05 382 aa15.38■□□□□ 0.05
CCDC28A-203ENST00000617445 MAGEB3O15480 346 aa15.38■□□□□ 0.05
CCDC28A-203ENST00000617445 CALCBP10092 127 aa15.38■□□□□ 0.05
CCDC28A-203ENST00000617445 ZNF44P15621 663 aa15.38■□□□□ 0.05
CCDC28A-203ENST00000617445 HTR1DP28221 377 aa15.38■□□□□ 0.05
CCDC28A-203ENST00000617445 MTNR1BP49286 362 aa15.38■□□□□ 0.05
CCDC28A-203ENST00000617445 RAB13P51153 203 aa15.38■□□□□ 0.05
CCDC28A-203ENST00000617445 SNU13P55769 128 aaKnown RBP15.38■□□□□ 0.05
CCDC28A-203ENST00000617445 CCDC58Q4VC31 144 aa15.38■□□□□ 0.05
CCDC28A-203ENST00000617445 LDLRAD2Q5SZI1 272 aa15.38■□□□□ 0.05
CCDC28A-203ENST00000617445 KLHDC1Q8N7A1 406 aa15.38■□□□□ 0.05
CCDC28A-203ENST00000617445 PXT1Q8NFP0 134 aa15.38■□□□□ 0.05
CCDC28A-203ENST00000617445 OR5D18Q8NGL1 313 aa15.38■□□□□ 0.05
CCDC28A-203ENST00000617445 NDNFQ8TB73 568 aa15.38■□□□□ 0.05
CCDC28A-203ENST00000617445 ZNF596Q8TC21 504 aa15.38■□□□□ 0.05
CCDC28A-203ENST00000617445 CREB3L1Q96BA8 519 aa15.38■□□□□ 0.05
CCDC28A-203ENST00000617445 NKX3-1Q99801 234 aaPredicted RBP15.38■□□□□ 0.05
CCDC28A-203ENST00000617445 PRSS22Q9GZN4 317 aa15.38■□□□□ 0.05
CCDC28A-203ENST00000617445 FGF20Q9NP95 211 aaPredicted RBP15.38■□□□□ 0.05
CCDC28A-203ENST00000617445 IRGMA1A4Y4 181 aa15.37■□□□□ 0.05
CCDC28A-203ENST00000617445 F2RL2O00254 374 aa15.37■□□□□ 0.05
CCDC28A-203ENST00000617445 DEGS1O15121 323 aa15.37■□□□□ 0.05
CCDC28A-203ENST00000617445 TSPAN15O95858 294 aa15.37■□□□□ 0.05
CCDC28A-203ENST00000617445 RAB3AP20336 220 aa15.37■□□□□ 0.05
CCDC28A-203ENST00000617445 DCKP27707 260 aa15.37■□□□□ 0.05
CCDC28A-203ENST00000617445 ARHGDIBP52566 201 aa15.37■□□□□ 0.05
CCDC28A-203ENST00000617445 ZP1P60852 638 aa15.37■□□□□ 0.05
CCDC28A-203ENST00000617445 PLA1AQ53H76 456 aa15.37■□□□□ 0.05
CCDC28A-203ENST00000617445 ZNF691Q5VV52 312 aa15.37■□□□□ 0.05
CCDC28A-203ENST00000617445 ELP2Q6IA86 826 aa15.37■□□□□ 0.05
CCDC28A-203ENST00000617445 Q6P435 159 aa15.37■□□□□ 0.05
CCDC28A-203ENST00000617445 CCBE1Q6UXH8 406 aaPredicted RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms