RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 STARD10Q9Y365 291 aa12.88□□□□□ -0.35
VPS36-207ENST00000611132 ZNF154Q13106 437 aa12.88□□□□□ -0.35
VPS36-207ENST00000611132 OR10G3Q8NGC4 313 aa12.88□□□□□ -0.35
VPS36-207ENST00000611132 OR2T10Q8NGZ9 312 aa12.88□□□□□ -0.35
VPS36-207ENST00000611132 RPP25Q9BUL9 199 aaKnown RBP12.88□□□□□ -0.35
VPS36-207ENST00000611132 TET1Q8NFU7 2136 aa12.88□□□□□ -0.35
VPS36-207ENST00000611132 RAB4AP20338 218 aa12.87□□□□□ -0.35
VPS36-207ENST00000611132 LSM6P62312 80 aaKnown RBP12.87□□□□□ -0.35
VPS36-207ENST00000611132 PHYHD1Q5SRE7 291 aa12.87□□□□□ -0.35
VPS36-207ENST00000611132 ZNF573Q86YE8 665 aa12.87□□□□□ -0.35
VPS36-207ENST00000611132 SLC35G3Q8N808 338 aa12.87□□□□□ -0.35
VPS36-207ENST00000611132 OR2I1PQ8NGU4 316 aa12.87□□□□□ -0.35
VPS36-207ENST00000611132 OR1L3Q8NH93 324 aa12.87□□□□□ -0.35
VPS36-207ENST00000611132 VAMP8Q9BV40 100 aa12.87□□□□□ -0.35
VPS36-207ENST00000611132 GPR61Q9BZJ8 451 aa12.87□□□□□ -0.35
VPS36-207ENST00000611132 STRADBQ9C0K7 418 aa12.87□□□□□ -0.35
VPS36-207ENST00000611132 PRSS50Q9UI38 385 aa12.87□□□□□ -0.35
VPS36-207ENST00000611132 C20orf202A1L168 122 aa12.87□□□□□ -0.35
VPS36-207ENST00000611132 CXCL13O43927 109 aa12.87□□□□□ -0.35
VPS36-207ENST00000611132 DANCRP0C864 163 aa12.87□□□□□ -0.35
VPS36-207ENST00000611132 CCKARP32238 428 aa12.87□□□□□ -0.35
VPS36-207ENST00000611132 ZNF808Q8N4W9 903 aaPredicted RBP12.87□□□□□ -0.35
VPS36-207ENST00000611132 GABRG3Q99928 467 aa12.87□□□□□ -0.35
VPS36-207ENST00000611132 LMO7DNF2Z398 122 aa12.87□□□□□ -0.35
VPS36-207ENST00000611132 FGF16O43320 207 aa12.87□□□□□ -0.35
VPS36-207ENST00000611132 CLN5O75503 358 aa12.87□□□□□ -0.35
VPS36-207ENST00000611132 LYPD3O95274 346 aa12.87□□□□□ -0.35
VPS36-207ENST00000611132 HNF1AP20823 631 aa12.87□□□□□ -0.35
VPS36-207ENST00000611132 UBE2G2P60604 165 aa12.87□□□□□ -0.35
VPS36-207ENST00000611132 KMT5CQ86Y97 462 aa12.87□□□□□ -0.35
VPS36-207ENST00000611132 M1APQ8TC57 530 aa12.87□□□□□ -0.35
VPS36-207ENST00000611132 C10orf35Q96D05 121 aa12.87□□□□□ -0.35
VPS36-207ENST00000611132 SMIM8Q96KF7 97 aa12.87□□□□□ -0.35
VPS36-207ENST00000611132 TAAR9Q96RI9 348 aa12.87□□□□□ -0.35
VPS36-207ENST00000611132 CACNG5Q9UF02 275 aa12.87□□□□□ -0.35
VPS36-207ENST00000611132 VAX2Q9UIW0 290 aa12.87□□□□□ -0.35
VPS36-207ENST00000611132 ZNF708P17019 499 aa12.87□□□□□ -0.35
VPS36-207ENST00000611132 DDTP30046 118 aa12.87□□□□□ -0.35
VPS36-207ENST00000611132 GCH1P30793 250 aa12.87□□□□□ -0.35
VPS36-207ENST00000611132 ZNF92Q03936 586 aa12.87□□□□□ -0.35
VPS36-207ENST00000611132 SLC38A11Q08AI6 406 aa12.87□□□□□ -0.35
VPS36-207ENST00000611132 CEACAM16Q2WEN9 425 aa12.87□□□□□ -0.35
VPS36-207ENST00000611132 NUDT16L1Q9BRJ7 211 aaKnown RBP12.87□□□□□ -0.35
VPS36-207ENST00000611132 FAM103A1Q9BTL3 118 aaKnown RBP12.87□□□□□ -0.35
VPS36-207ENST00000611132 G6PC2Q9NQR9 355 aa12.87□□□□□ -0.35
VPS36-207ENST00000611132 ERRFI1Q9UJM3 462 aaPredicted RBP12.87□□□□□ -0.35
VPS36-207ENST00000611132 A0A087WV48 116 aa12.86□□□□□ -0.35
VPS36-207ENST00000611132 ZNF732B4DXR9 585 aa12.86□□□□□ -0.35
VPS36-207ENST00000611132 PPP1CCP36873 323 aaKnown RBP12.86□□□□□ -0.35
VPS36-207ENST00000611132 SUMO1P63165 101 aaKnown RBP12.86□□□□□ -0.35
VPS36-207ENST00000611132 AGBL5Q8NDL9 886 aa12.86□□□□□ -0.35
VPS36-207ENST00000611132 RHOVQ96L33 236 aa12.86□□□□□ -0.35
VPS36-207ENST00000611132 CHST5Q9GZS9 411 aa12.86□□□□□ -0.35
VPS36-207ENST00000611132 C5orf49A4QMS7 147 aa12.86□□□□□ -0.35
VPS36-207ENST00000611132 MGST1P10620 155 aaKnown RBP12.86□□□□□ -0.35
VPS36-207ENST00000611132 HLA-GP17693 338 aa12.86□□□□□ -0.35
VPS36-207ENST00000611132 CHRNA7P36544 502 aa12.86□□□□□ -0.35
VPS36-207ENST00000611132 FOXK1P85037 733 aa12.86□□□□□ -0.35
VPS36-207ENST00000611132 EGR4Q05215 589 aa12.86□□□□□ -0.35
VPS36-207ENST00000611132 CLN3Q13286 438 aa12.86□□□□□ -0.35
VPS36-207ENST00000611132 ZNF774Q6NX45 483 aa12.86□□□□□ -0.35
VPS36-207ENST00000611132 LINC00114Q6XXX2 140 aa12.86□□□□□ -0.35
VPS36-207ENST00000611132 ZNF600Q6ZNG1 722 aa12.86□□□□□ -0.35
VPS36-207ENST00000611132 FGF11Q92914 225 aa12.86□□□□□ -0.35
VPS36-207ENST00000611132 CLDN23Q96B33 292 aa12.86□□□□□ -0.35
VPS36-207ENST00000611132 ZNF646O15015 1829 aaPredicted RBP12.86□□□□□ -0.35
VPS36-207ENST00000611132 TMEM14DPA8MWL7 114 aa12.86□□□□□ -0.35
VPS36-207ENST00000611132 SIRPB1O00241 398 aa12.86□□□□□ -0.35
VPS36-207ENST00000611132 TNFSF11O14788 317 aa12.86□□□□□ -0.35
VPS36-207ENST00000611132 SRSF3P84103 164 aaKnown RBP12.86□□□□□ -0.35
VPS36-207ENST00000611132 FOXB1Q99853 325 aa12.86□□□□□ -0.35
VPS36-207ENST00000611132 HEXAP06865 529 aa12.85□□□□□ -0.35
VPS36-207ENST00000611132 EDN3P14138 238 aa12.85□□□□□ -0.35
VPS36-207ENST00000611132 KLK2P20151 261 aa12.85□□□□□ -0.35
VPS36-207ENST00000611132 NTF3P20783 257 aa12.85□□□□□ -0.35
VPS36-207ENST00000611132 THBS3P49746 956 aa12.85□□□□□ -0.35
VPS36-207ENST00000611132 KRTDAPP60985 99 aa12.85□□□□□ -0.35
VPS36-207ENST00000611132 TLE1Q04724 770 aa12.85□□□□□ -0.35
VPS36-207ENST00000611132 ZP4Q12836 540 aa12.85□□□□□ -0.35
VPS36-207ENST00000611132 SFTPA2Q8IWL1 248 aa12.85□□□□□ -0.35
VPS36-207ENST00000611132 APCDD1LQ8NCL9 501 aa12.85□□□□□ -0.35
VPS36-207ENST00000611132 ZNF331Q9NQX6 463 aaPredicted RBP12.85□□□□□ -0.35
VPS36-207ENST00000611132 MTCH2Q9Y6C9 303 aa12.85□□□□□ -0.35
VPS36-207ENST00000611132 PRR32B1ATL7 298 aa12.85□□□□□ -0.35
VPS36-207ENST00000611132 H0YL77 283 aa12.85□□□□□ -0.35
VPS36-207ENST00000611132 PITX3O75364 302 aa12.85□□□□□ -0.35
VPS36-207ENST00000611132 MMP7P09237 267 aaPredicted RBP12.85□□□□□ -0.35
VPS36-207ENST00000611132 FBP1P09467 338 aa12.85□□□□□ -0.35
VPS36-207ENST00000611132 GABRA2P47869 451 aa12.85□□□□□ -0.35
VPS36-207ENST00000611132 PRAMEF5Q5TYX0 476 aa12.85□□□□□ -0.35
VPS36-207ENST00000611132 PRAMEF6Q5VXH4 476 aa12.85□□□□□ -0.35
VPS36-207ENST00000611132 ZNF519Q8TB69 540 aa12.85□□□□□ -0.35
VPS36-207ENST00000611132 DUXBA0A1W2PPF3 345 aa12.85□□□□□ -0.35
VPS36-207ENST00000611132 TRDCB7Z8K6 153 aa12.85□□□□□ -0.35
VPS36-207ENST00000611132 FHITP49789 147 aa12.85□□□□□ -0.35
VPS36-207ENST00000611132 PRSS12P56730 875 aa12.85□□□□□ -0.35
VPS36-207ENST00000611132 C9orf40Q8IXQ3 194 aa12.85□□□□□ -0.35
VPS36-207ENST00000611132 CA5BP1Q8WTZ4 195 aa12.85□□□□□ -0.35
VPS36-207ENST00000611132 FAM234AQ9H0X4 552 aa12.85□□□□□ -0.35
VPS36-207ENST00000611132 SLC25A22Q9H936 323 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms