RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 DNTTIP1Q9H147 329 aa13.34□□□□□ -0.27
SHKBP1-215ENST00000597649 RANBP3Q9H6Z4 567 aaPredicted RBP13.34□□□□□ -0.27
SHKBP1-215ENST00000597649 ELL3Q9HB65 397 aaPredicted RBP13.34□□□□□ -0.27
SHKBP1-215ENST00000597649 SERTAD4Q9NUC0 356 aa13.34□□□□□ -0.27
SHKBP1-215ENST00000597649 SF3B6Q9Y3B4 125 aaKnown RBP13.34□□□□□ -0.27
SHKBP1-215ENST00000597649 MPC1Q9Y5U8 109 aa13.34□□□□□ -0.27
SHKBP1-215ENST00000597649 A6NIN4 97 aa13.33□□□□□ -0.28
SHKBP1-215ENST00000597649 SIGLEC5O15389 551 aa13.33□□□□□ -0.28
SHKBP1-215ENST00000597649 AKR7A2O43488 359 aa13.33□□□□□ -0.28
SHKBP1-215ENST00000597649 CD1AP06126 327 aa13.33□□□□□ -0.28
SHKBP1-215ENST00000597649 CD2P06729 351 aa13.33□□□□□ -0.28
SHKBP1-215ENST00000597649 ACAA1P09110 424 aaPredicted RBP13.33□□□□□ -0.28
SHKBP1-215ENST00000597649 NDUFB7P17568 137 aa13.33□□□□□ -0.28
SHKBP1-215ENST00000597649 PRDX4Q13162 271 aa13.33□□□□□ -0.28
SHKBP1-215ENST00000597649 GPR50Q13585 617 aa13.33□□□□□ -0.28
SHKBP1-215ENST00000597649 NEDD8Q15843 81 aa13.33□□□□□ -0.28
SHKBP1-215ENST00000597649 YIF1BQ5BJH7 314 aa13.33□□□□□ -0.28
SHKBP1-215ENST00000597649 VAX1Q5SQQ9 334 aa13.33□□□□□ -0.28
SHKBP1-215ENST00000597649 CLVS2Q5SYC1 327 aa13.33□□□□□ -0.28
SHKBP1-215ENST00000597649 UBE2UQ5VVX9 321 aa13.33□□□□□ -0.28
SHKBP1-215ENST00000597649 LIPKQ5VXJ0 399 aa13.33□□□□□ -0.28
SHKBP1-215ENST00000597649 FOXB2Q5VYV0 432 aa13.33□□□□□ -0.28
SHKBP1-215ENST00000597649 Q6ZSR3 168 aa13.33□□□□□ -0.28
SHKBP1-215ENST00000597649 KCTD8Q6ZWB6 473 aa13.33□□□□□ -0.28
SHKBP1-215ENST00000597649 MOB3CQ70IA8 216 aa13.33□□□□□ -0.28
SHKBP1-215ENST00000597649 ZDHHC23Q8IYP9 409 aa13.33□□□□□ -0.28
SHKBP1-215ENST00000597649 MS4A15Q8N5U1 240 aa13.33□□□□□ -0.28
SHKBP1-215ENST00000597649 OR10AC1Q8NH08 325 aa13.33□□□□□ -0.28
SHKBP1-215ENST00000597649 RPS4Y2Q8TD47 263 aa13.33□□□□□ -0.28
SHKBP1-215ENST00000597649 WIPF2Q8TF74 440 aaPredicted RBP13.33□□□□□ -0.28
SHKBP1-215ENST00000597649 FGGYQ96C11 551 aa13.33□□□□□ -0.28
SHKBP1-215ENST00000597649 C10orf35Q96D05 121 aa13.33□□□□□ -0.28
SHKBP1-215ENST00000597649 MICU1Q9BPX6 476 aa13.33□□□□□ -0.28
SHKBP1-215ENST00000597649 FAM234AQ9H0X4 552 aa13.33□□□□□ -0.28
SHKBP1-215ENST00000597649 ZNF702PQ9H963 129 aa13.33□□□□□ -0.28
SHKBP1-215ENST00000597649 A0A1W2PQ09 198 aa13.32□□□□□ -0.28
SHKBP1-215ENST00000597649 ANGPTL7O43827 346 aa13.32□□□□□ -0.28
SHKBP1-215ENST00000597649 NRASP01111 189 aa13.32□□□□□ -0.28
SHKBP1-215ENST00000597649 OCM2P0CE71 109 aa13.32□□□□□ -0.28
SHKBP1-215ENST00000597649 OCMP0CE72 109 aaPredicted RBP13.32□□□□□ -0.28
SHKBP1-215ENST00000597649 VSIG8P0DPA2 414 aa13.32□□□□□ -0.28
SHKBP1-215ENST00000597649 SOX2P48431 317 aa13.32□□□□□ -0.28
SHKBP1-215ENST00000597649 BMXP51813 675 aa13.32□□□□□ -0.28
SHKBP1-215ENST00000597649 CAV3P56539 151 aa13.32□□□□□ -0.28
SHKBP1-215ENST00000597649 TPBGQ13641 420 aa13.32□□□□□ -0.28
SHKBP1-215ENST00000597649 DOC2BQ14184 412 aa13.32□□□□□ -0.28
SHKBP1-215ENST00000597649 AANATQ16613 207 aa13.32□□□□□ -0.28
SHKBP1-215ENST00000597649 PLCXD3Q63HM9 321 aa13.32□□□□□ -0.28
SHKBP1-215ENST00000597649 MKXQ8IYA7 352 aa13.32□□□□□ -0.28
SHKBP1-215ENST00000597649 OR4S1Q8NGB4 309 aa13.32□□□□□ -0.28
SHKBP1-215ENST00000597649 OR51A4Q8NGJ6 313 aa13.32□□□□□ -0.28
SHKBP1-215ENST00000597649 OR10Z1Q8NGY1 313 aa13.32□□□□□ -0.28
SHKBP1-215ENST00000597649 R3HDM4Q96D70 268 aa13.32□□□□□ -0.28
SHKBP1-215ENST00000597649 MED30Q96HR3 178 aa13.32□□□□□ -0.28
SHKBP1-215ENST00000597649 OPALINQ96PE5 141 aa13.32□□□□□ -0.28
SHKBP1-215ENST00000597649 TMED9Q9BVK6 235 aa13.32□□□□□ -0.28
SHKBP1-215ENST00000597649 IGKV1D-17A0A075B6S4 117 aa13.31□□□□□ -0.28
SHKBP1-215ENST00000597649 MAGEA13PA6NCF6 341 aa13.31□□□□□ -0.28
SHKBP1-215ENST00000597649 FBXO24O75426 580 aa13.31□□□□□ -0.28
SHKBP1-215ENST00000597649 GATBO75879 557 aaKnown RBP13.31□□□□□ -0.28
SHKBP1-215ENST00000597649 CPEP16870 476 aa13.31□□□□□ -0.28
SHKBP1-215ENST00000597649 ERVFRD-1P60508 538 aa13.31□□□□□ -0.28
SHKBP1-215ENST00000597649 TRAM1Q15629 374 aa13.31□□□□□ -0.28
SHKBP1-215ENST00000597649 FAM76BQ5HYJ3 339 aa13.31□□□□□ -0.28
SHKBP1-215ENST00000597649 C11orf87Q6NUJ2 197 aa13.31□□□□□ -0.28
SHKBP1-215ENST00000597649 CCBE1Q6UXH8 406 aaPredicted RBP13.31□□□□□ -0.28
SHKBP1-215ENST00000597649 C11orf42Q8N5U0 333 aa13.31□□□□□ -0.28
SHKBP1-215ENST00000597649 ZNRF1Q8ND25 227 aa13.31□□□□□ -0.28
SHKBP1-215ENST00000597649 PP6455Q8WZ26 134 aa13.31□□□□□ -0.28
SHKBP1-215ENST00000597649 OR5P3Q8WZ94 311 aa13.31□□□□□ -0.28
SHKBP1-215ENST00000597649 THRSPQ92748 146 aa13.31□□□□□ -0.28
SHKBP1-215ENST00000597649 RNF170Q96K19 258 aa13.31□□□□□ -0.28
SHKBP1-215ENST00000597649 PGLYRP3Q96LB9 341 aa13.31□□□□□ -0.28
SHKBP1-215ENST00000597649 CITED2Q99967 270 aaPredicted RBP13.31□□□□□ -0.28
SHKBP1-215ENST00000597649 RTL8AQ9BWD3 113 aa13.31□□□□□ -0.28
SHKBP1-215ENST00000597649 RAB18Q9NP72 206 aa13.31□□□□□ -0.28
SHKBP1-215ENST00000597649 GPR173Q9NS66 373 aa13.31□□□□□ -0.28
SHKBP1-215ENST00000597649 SLC7A11Q9UPY5 501 aa13.31□□□□□ -0.28
SHKBP1-215ENST00000597649 NKX6-3A6NJ46 265 aa13.3□□□□□ -0.28
SHKBP1-215ENST00000597649 INMTO95050 263 aa13.3□□□□□ -0.28
SHKBP1-215ENST00000597649 MPIG6BO95866 241 aa13.3□□□□□ -0.28
SHKBP1-215ENST00000597649 GABRA2P47869 451 aa13.3□□□□□ -0.28
SHKBP1-215ENST00000597649 BLMHQ13867 455 aa13.3□□□□□ -0.28
SHKBP1-215ENST00000597649 Q499Y3 187 aa13.3□□□□□ -0.28
SHKBP1-215ENST00000597649 CEP78Q5JTW2 689 aa13.3□□□□□ -0.28
SHKBP1-215ENST00000597649 SERPINA12Q8IW75 414 aa13.3□□□□□ -0.28
SHKBP1-215ENST00000597649 Q8N2B8 174 aa13.3□□□□□ -0.28
SHKBP1-215ENST00000597649 OR5D14Q8NGL3 314 aa13.3□□□□□ -0.28
SHKBP1-215ENST00000597649 OR5D13Q8NGL4 314 aa13.3□□□□□ -0.28
SHKBP1-215ENST00000597649 OR13C5Q8NGS8 318 aa13.3□□□□□ -0.28
SHKBP1-215ENST00000597649 RGP1Q92546 391 aaPredicted RBP13.3□□□□□ -0.28
SHKBP1-215ENST00000597649 TMEM203Q969S6 136 aa13.3□□□□□ -0.28
SHKBP1-215ENST00000597649 ADAT3Q96EY9 351 aaPredicted RBP13.3□□□□□ -0.28
SHKBP1-215ENST00000597649 NKX3-1Q99801 234 aaPredicted RBP13.3□□□□□ -0.28
SHKBP1-215ENST00000597649 NPFFR1Q9GZQ6 430 aa13.3□□□□□ -0.28
SHKBP1-215ENST00000597649 NEK6Q9HC98 313 aa13.3□□□□□ -0.28
SHKBP1-215ENST00000597649 C19orf12Q9NSK7 152 aa13.3□□□□□ -0.28
SHKBP1-215ENST00000597649 NLKQ9UBE8 527 aa13.3□□□□□ -0.28
SHKBP1-215ENST00000597649 ZNF222Q9UK12 451 aa13.3□□□□□ -0.28
SHKBP1-215ENST00000597649 TRBV5-5A0A0J9YX44 114 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms