RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 ZNF222Q9UK12 451 aa14.32□□□□□ -0.12
SHKBP1-203ENST00000594298 SIRT4Q9Y6E7 314 aaPredicted RBP14.32□□□□□ -0.12
SHKBP1-203ENST00000594298 PAHP00439 452 aa14.31□□□□□ -0.12
SHKBP1-203ENST00000594298 LALBAP00709 142 aa14.31□□□□□ -0.12
SHKBP1-203ENST00000594298 CHRM2P08172 466 aa14.31□□□□□ -0.12
SHKBP1-203ENST00000594298 CSF1P09603 554 aa14.31□□□□□ -0.12
SHKBP1-203ENST00000594298 SELLP14151 372 aa14.31□□□□□ -0.12
SHKBP1-203ENST00000594298 DLX1P56177 255 aa14.31□□□□□ -0.12
SHKBP1-203ENST00000594298 PPP3R1P63098 170 aa14.31□□□□□ -0.12
SHKBP1-203ENST00000594298 PRB3Q04118 309 aaPredicted RBP14.31□□□□□ -0.12
SHKBP1-203ENST00000594298 KLRD1Q13241 179 aa14.31□□□□□ -0.12
SHKBP1-203ENST00000594298 DGUOKQ16854 277 aa14.31□□□□□ -0.12
SHKBP1-203ENST00000594298 C1QL4Q86Z23 238 aa14.31□□□□□ -0.12
SHKBP1-203ENST00000594298 SAXO1Q8IYX7 474 aa14.31□□□□□ -0.12
SHKBP1-203ENST00000594298 TMEM185AQ8NFB2 350 aa14.31□□□□□ -0.12
SHKBP1-203ENST00000594298 H1FXQ92522 213 aaKnown RBP14.31□□□□□ -0.12
SHKBP1-203ENST00000594298 RGP1Q92546 391 aaPredicted RBP14.31□□□□□ -0.12
SHKBP1-203ENST00000594298 THRSPQ92748 146 aa14.31□□□□□ -0.12
SHKBP1-203ENST00000594298 TMEM106AQ96A25 262 aa14.31□□□□□ -0.12
SHKBP1-203ENST00000594298 CNBD2Q96M20 576 aa14.31□□□□□ -0.12
SHKBP1-203ENST00000594298 DUSP21Q9H596 190 aa14.31□□□□□ -0.12
SHKBP1-203ENST00000594298 OR14J1Q9UGF5 321 aa14.31□□□□□ -0.12
SHKBP1-203ENST00000594298 BLOC1S6Q9UL45 172 aa14.31□□□□□ -0.12
SHKBP1-203ENST00000594298 RRP15Q9Y3B9 282 aaKnown RBP14.31□□□□□ -0.12
SHKBP1-203ENST00000594298 MAB21L2Q9Y586 359 aa14.31□□□□□ -0.12
SHKBP1-203ENST00000594298 A0A1W2PRD5 423 aa14.3□□□□□ -0.12
SHKBP1-203ENST00000594298 A0A1W2PRF3 423 aa14.3□□□□□ -0.12
SHKBP1-203ENST00000594298 A0A1W2PRM7 423 aa14.3□□□□□ -0.12
SHKBP1-203ENST00000594298 MEIOCA2RUB1 952 aa14.3□□□□□ -0.12
SHKBP1-203ENST00000594298 RGS10O43665 173 aa14.3□□□□□ -0.12
SHKBP1-203ENST00000594298 INMTO95050 263 aa14.3□□□□□ -0.12
SHKBP1-203ENST00000594298 SLC35A2P78381 396 aa14.3□□□□□ -0.12
SHKBP1-203ENST00000594298 KISS1Q15726 138 aa14.3□□□□□ -0.12
SHKBP1-203ENST00000594298 Q499Y3 187 aa14.3□□□□□ -0.12
SHKBP1-203ENST00000594298 RBM48Q5RL73 367 aaKnown RBP14.3□□□□□ -0.12
SHKBP1-203ENST00000594298 SLC35E4Q6ICL7 350 aa14.3□□□□□ -0.12
SHKBP1-203ENST00000594298 CD177Q8N6Q3 437 aa14.3□□□□□ -0.12
SHKBP1-203ENST00000594298 ZNRF1Q8ND25 227 aa14.3□□□□□ -0.12
SHKBP1-203ENST00000594298 BEND2Q8NDZ0 799 aa14.3□□□□□ -0.12
SHKBP1-203ENST00000594298 EMG1Q92979 244 aaKnown RBP14.3□□□□□ -0.12
SHKBP1-203ENST00000594298 FAM234AQ9H0X4 552 aa14.3□□□□□ -0.12
SHKBP1-203ENST00000594298 PPA2Q9H2U2 334 aa14.3□□□□□ -0.12
SHKBP1-203ENST00000594298 SEBOXQ9HB31 216 aaPredicted RBP14.3□□□□□ -0.12
SHKBP1-203ENST00000594298 CKLFQ9UBR5 152 aa14.3□□□□□ -0.12
SHKBP1-203ENST00000594298 TRBV23-1A0A0A0MS06 115 aa14.29□□□□□ -0.12
SHKBP1-203ENST00000594298 TRBV5-5A0A0J9YX44 114 aa14.29□□□□□ -0.12
SHKBP1-203ENST00000594298 ALDOBP05062 364 aa14.29□□□□□ -0.12
SHKBP1-203ENST00000594298 CELP19835 753 aa14.29□□□□□ -0.12
SHKBP1-203ENST00000594298 HERPUD1Q15011 391 aa14.29□□□□□ -0.12
SHKBP1-203ENST00000594298 ZNF529Q6P280 563 aa14.29□□□□□ -0.12
SHKBP1-203ENST00000594298 C11orf88Q6PI97 169 aa14.29□□□□□ -0.12
SHKBP1-203ENST00000594298 FAM58AQ8N1B3 248 aa14.29□□□□□ -0.12
SHKBP1-203ENST00000594298 BATF2Q8N1L9 274 aa14.29□□□□□ -0.12
SHKBP1-203ENST00000594298 PNKDQ8N490 385 aa14.29□□□□□ -0.12
SHKBP1-203ENST00000594298 ZFP41Q8N8Y5 198 aa14.29□□□□□ -0.12
SHKBP1-203ENST00000594298 RFT1Q96AA3 541 aa14.29□□□□□ -0.12
SHKBP1-203ENST00000594298 GPER1Q99527 375 aa14.29□□□□□ -0.12
SHKBP1-203ENST00000594298 TAS2R4Q9NYW5 299 aa14.29□□□□□ -0.12
SHKBP1-203ENST00000594298 A0A1W2PPH5 198 aa14.28□□□□□ -0.12
SHKBP1-203ENST00000594298 A0A1W2PQ09 198 aa14.28□□□□□ -0.12
SHKBP1-203ENST00000594298 TFF1P04155 84 aa14.28□□□□□ -0.12
SHKBP1-203ENST00000594298 TMEM225BP0DP42 221 aa14.28□□□□□ -0.12
SHKBP1-203ENST00000594298 CRHBPP24387 322 aa14.28□□□□□ -0.12
SHKBP1-203ENST00000594298 GABRA5P31644 462 aa14.28□□□□□ -0.12
SHKBP1-203ENST00000594298 BMXP51813 675 aa14.28□□□□□ -0.12
SHKBP1-203ENST00000594298 BLMHQ13867 455 aa14.28□□□□□ -0.12
SHKBP1-203ENST00000594298 SPHARQ15513 63 aa14.28□□□□□ -0.12
SHKBP1-203ENST00000594298 MED22Q15528 200 aa14.28□□□□□ -0.12
SHKBP1-203ENST00000594298 SPIN3Q5JUX0 258 aa14.28□□□□□ -0.12
SHKBP1-203ENST00000594298 SATL1Q86VE3 508 aa14.28□□□□□ -0.12
SHKBP1-203ENST00000594298 MS4A15Q8N5U1 240 aa14.28□□□□□ -0.12
SHKBP1-203ENST00000594298 OR5D13Q8NGL4 314 aa14.28□□□□□ -0.12
SHKBP1-203ENST00000594298 PGLYRP3Q96LB9 341 aa14.28□□□□□ -0.12
SHKBP1-203ENST00000594298 SPACA5Q96QH8 159 aa14.28□□□□□ -0.12
SHKBP1-203ENST00000594298 ZNF184Q99676 751 aaPredicted RBP14.28□□□□□ -0.12
SHKBP1-203ENST00000594298 CCDC90BQ9GZT6 254 aa14.28□□□□□ -0.12
SHKBP1-203ENST00000594298 TMEM138Q9NPI0 162 aa14.28□□□□□ -0.12
SHKBP1-203ENST00000594298 SF3B6Q9Y3B4 125 aaKnown RBP14.28□□□□□ -0.12
SHKBP1-203ENST00000594298 PNMA8CA0A1B0GUJ8 204 aa14.27□□□□□ -0.13
SHKBP1-203ENST00000594298 F8VVB4 439 aa14.27□□□□□ -0.13
SHKBP1-203ENST00000594298 F8VWA3 439 aa14.27□□□□□ -0.13
SHKBP1-203ENST00000594298 GPX5O75715 221 aa14.27□□□□□ -0.13
SHKBP1-203ENST00000594298 KDM4BO94953 1096 aa14.27□□□□□ -0.13
SHKBP1-203ENST00000594298 PRKACAP17612 351 aa14.27□□□□□ -0.13
SHKBP1-203ENST00000594298 BCL3P20749 454 aa14.27□□□□□ -0.13
SHKBP1-203ENST00000594298 MAPK3P27361 379 aaPredicted RBP14.27□□□□□ -0.13
SHKBP1-203ENST00000594298 BDKRB2P30411 391 aa14.27□□□□□ -0.13
SHKBP1-203ENST00000594298 KIR2DS4P43632 304 aa14.27□□□□□ -0.13
SHKBP1-203ENST00000594298 NPBWR2P48146 333 aa14.27□□□□□ -0.13
SHKBP1-203ENST00000594298 EFNB2P52799 333 aa14.27□□□□□ -0.13
SHKBP1-203ENST00000594298 GPR50Q13585 617 aa14.27□□□□□ -0.13
SHKBP1-203ENST00000594298 IRF3Q14653 427 aa14.27□□□□□ -0.13
SHKBP1-203ENST00000594298 BEAN1Q3B7T3 259 aa14.27□□□□□ -0.13
SHKBP1-203ENST00000594298 KPRPQ5T749 579 aaPredicted RBP14.27□□□□□ -0.13
SHKBP1-203ENST00000594298 HCP5Q6MZN7 132 aa14.27□□□□□ -0.13
SHKBP1-203ENST00000594298 Q6ZTK2 550 aa14.27□□□□□ -0.13
SHKBP1-203ENST00000594298 PRSS48Q7RTY5 328 aa14.27□□□□□ -0.13
SHKBP1-203ENST00000594298 OR5D18Q8NGL1 313 aa14.27□□□□□ -0.13
SHKBP1-203ENST00000594298 PPP1R35Q8TAP8 253 aa14.27□□□□□ -0.13
SHKBP1-203ENST00000594298 CFHR4Q92496 578 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms