RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 EXTL1Q92935 676 aa15.9■□□□□ 0.14
PRPF40B-208ENST00000548436 GALNT14Q96FL9 552 aa15.9■□□□□ 0.14
PRPF40B-208ENST00000548436 POM121Q96HA1 1249 aa15.9■□□□□ 0.14
PRPF40B-208ENST00000548436 SLC2A9Q9NRM0 540 aa15.9■□□□□ 0.14
PRPF40B-208ENST00000548436 PCDHB10Q9UN67 800 aa15.9■□□□□ 0.14
PRPF40B-208ENST00000548436 KCNIP3Q9Y2W7 256 aa15.9■□□□□ 0.14
PRPF40B-208ENST00000548436 FRYQ5TBA9 3013 aa15.9■□□□□ 0.14
PRPF40B-208ENST00000548436 URB1O60287 2271 aaKnown RBP15.9■□□□□ 0.14
PRPF40B-208ENST00000548436 TRGV5A0A0B4J1U4 118 aa15.9■□□□□ 0.14
PRPF40B-208ENST00000548436 FAM90A10PA6NDY2 464 aa15.9■□□□□ 0.14
PRPF40B-208ENST00000548436 FAM90A18PA6NE21 464 aa15.9■□□□□ 0.14
PRPF40B-208ENST00000548436 FAM90A16PA6NEW6 464 aa15.9■□□□□ 0.14
PRPF40B-208ENST00000548436 FAM90A20PA6NIJ5 464 aa15.9■□□□□ 0.14
PRPF40B-208ENST00000548436 FAM90A8PA6NJQ4 464 aa15.9■□□□□ 0.14
PRPF40B-208ENST00000548436 FAM90A7PA6NKC0 464 aa15.9■□□□□ 0.14
PRPF40B-208ENST00000548436 CD300LBA8K4G0 201 aa15.9■□□□□ 0.14
PRPF40B-208ENST00000548436 FAM90A22PA8MWA6 464 aa15.9■□□□□ 0.14
PRPF40B-208ENST00000548436 FAM90A12PA8MX19 464 aa15.9■□□□□ 0.14
PRPF40B-208ENST00000548436 FAM90A5PA8MXJ8 464 aa15.9■□□□□ 0.14
PRPF40B-208ENST00000548436 FAM90A23PA8MXZ1 464 aa15.9■□□□□ 0.14
PRPF40B-208ENST00000548436 SIGLEC5O15389 551 aa15.9■□□□□ 0.14
PRPF40B-208ENST00000548436 FAM90A15PP0C7V4 464 aa15.9■□□□□ 0.14
PRPF40B-208ENST00000548436 FAM90A13PP0C7W8 464 aa15.9■□□□□ 0.14
PRPF40B-208ENST00000548436 FAM90A14PP0C7W9 464 aa15.9■□□□□ 0.14
PRPF40B-208ENST00000548436 FAM90A24PP0C7X0 464 aa15.9■□□□□ 0.14
PRPF40B-208ENST00000548436 HKR1P10072 659 aa15.9■□□□□ 0.14
PRPF40B-208ENST00000548436 AADACP22760 399 aa15.9■□□□□ 0.14
PRPF40B-208ENST00000548436 OR1K1Q8NGR3 316 aa15.9■□□□□ 0.14
PRPF40B-208ENST00000548436 OR11L1Q8NGX0 322 aa15.9■□□□□ 0.14
PRPF40B-208ENST00000548436 TMEM100Q9NV29 134 aa15.9■□□□□ 0.14
PRPF40B-208ENST00000548436 IFNA21P01568 189 aa15.89■□□□□ 0.13
PRPF40B-208ENST00000548436 GLI4P10075 376 aa15.89■□□□□ 0.13
PRPF40B-208ENST00000548436 SPINK2P20155 84 aa15.89■□□□□ 0.13
PRPF40B-208ENST00000548436 OR5L1Q8NGL2 311 aa15.89■□□□□ 0.13
PRPF40B-208ENST00000548436 BCL2L2Q92843 193 aaPredicted RBP15.89■□□□□ 0.13
PRPF40B-208ENST00000548436 OR51B6Q9H340 312 aa15.89■□□□□ 0.13
PRPF40B-208ENST00000548436 ASF1BQ9NVP2 202 aa15.89■□□□□ 0.13
PRPF40B-208ENST00000548436 ZNF318Q5VUA4 2279 aa15.89■□□□□ 0.13
PRPF40B-208ENST00000548436 SLC22A20A6NK97 555 aa15.88■□□□□ 0.13
PRPF40B-208ENST00000548436 SYNGR1O43759 233 aa15.88■□□□□ 0.13
PRPF40B-208ENST00000548436 UCP3P55916 312 aa15.88■□□□□ 0.13
PRPF40B-208ENST00000548436 FBXW9Q5XUX1 488 aa15.88■□□□□ 0.13
PRPF40B-208ENST00000548436 OR2A2Q6IF42 318 aa15.88■□□□□ 0.13
PRPF40B-208ENST00000548436 OR5A2Q8NGI9 324 aa15.88■□□□□ 0.13
PRPF40B-208ENST00000548436 OR2S2Q9NQN1 319 aa15.88■□□□□ 0.13
PRPF40B-208ENST00000548436 LOC400499M0QZD8 3231 aa15.88■□□□□ 0.13
PRPF40B-208ENST00000548436 DEDDO75618 318 aa15.88■□□□□ 0.13
PRPF40B-208ENST00000548436 APLNRP35414 380 aa15.88■□□□□ 0.13
PRPF40B-208ENST00000548436 GLP1RP43220 463 aa15.88■□□□□ 0.13
PRPF40B-208ENST00000548436 PMP22Q01453 160 aa15.88■□□□□ 0.13
PRPF40B-208ENST00000548436 CLN3Q13286 438 aa15.88■□□□□ 0.13
PRPF40B-208ENST00000548436 BTN1A1Q13410 526 aa15.88■□□□□ 0.13
PRPF40B-208ENST00000548436 LYZL2Q7Z4W2 148 aa15.88■□□□□ 0.13
PRPF40B-208ENST00000548436 BPIFCQ8NFQ6 507 aa15.88■□□□□ 0.13
PRPF40B-208ENST00000548436 MARC2Q969Z3 335 aa15.88■□□□□ 0.13
PRPF40B-208ENST00000548436 RSRP1Q9BUV0 290 aa15.88■□□□□ 0.13
PRPF40B-208ENST00000548436 ZDHHC11Q9H8X9 412 aa15.88■□□□□ 0.13
PRPF40B-208ENST00000548436 RCC2Q9P258 522 aaKnown RBP15.88■□□□□ 0.13
PRPF40B-208ENST00000548436 GALR2O43603 387 aaPredicted RBP15.87■□□□□ 0.13
PRPF40B-208ENST00000548436 PPYP01298 95 aa15.87■□□□□ 0.13
PRPF40B-208ENST00000548436 FAM157CP0CG43 387 aa15.87■□□□□ 0.13
PRPF40B-208ENST00000548436 NUBP1P53384 320 aa15.87■□□□□ 0.13
PRPF40B-208ENST00000548436 MDP1Q86V88 176 aa15.87■□□□□ 0.13
PRPF40B-208ENST00000548436 MKXQ8IYA7 352 aa15.87■□□□□ 0.13
PRPF40B-208ENST00000548436 OR5T2Q8NGG2 359 aa15.87■□□□□ 0.13
PRPF40B-208ENST00000548436 GLYATL2Q8WU03 294 aa15.87■□□□□ 0.13
PRPF40B-208ENST00000548436 OR5P3Q8WZ94 311 aa15.87■□□□□ 0.13
PRPF40B-208ENST00000548436 MSI2Q96DH6 328 aaKnown RBP15.87■□□□□ 0.13
PRPF40B-208ENST00000548436 C18orf12Q96KH6 178 aa15.87■□□□□ 0.13
PRPF40B-208ENST00000548436 SUCNR1Q9BXA5 334 aa15.87■□□□□ 0.13
PRPF40B-208ENST00000548436 PIGMQ9H3S5 423 aa15.87■□□□□ 0.13
PRPF40B-208ENST00000548436 TRAPPC2LH3BP13 241 aa15.87■□□□□ 0.13
PRPF40B-208ENST00000548436 HSPB6O14558 160 aa15.87■□□□□ 0.13
PRPF40B-208ENST00000548436 NAPSAO96009 420 aa15.87■□□□□ 0.13
PRPF40B-208ENST00000548436 DUSP1P28562 367 aa15.87■□□□□ 0.13
PRPF40B-208ENST00000548436 HERV-K104P61576 105 aa15.87■□□□□ 0.13
PRPF40B-208ENST00000548436 SRSF6Q13247 344 aaKnown RBP15.87■□□□□ 0.13
PRPF40B-208ENST00000548436 RPL7L1Q6DKI1 246 aaKnown RBP15.87■□□□□ 0.13
PRPF40B-208ENST00000548436 TFAP2EQ6VUC0 442 aa15.87■□□□□ 0.13
PRPF40B-208ENST00000548436 LIAT1Q6ZQX7 453 aa15.87■□□□□ 0.13
PRPF40B-208ENST00000548436 VASH2Q86V25 355 aa15.87■□□□□ 0.13
PRPF40B-208ENST00000548436 LRTM2Q8N967 370 aa15.87■□□□□ 0.13
PRPF40B-208ENST00000548436 RNF141Q8WVD5 230 aa15.87■□□□□ 0.13
PRPF40B-208ENST00000548436 HIST1H2AAQ96QV6 131 aa15.87■□□□□ 0.13
PRPF40B-208ENST00000548436 OPA3Q9H6K4 179 aa15.87■□□□□ 0.13
PRPF40B-208ENST00000548436 Q9N2K0 584 aa15.87■□□□□ 0.13
PRPF40B-208ENST00000548436 LSM5Q9Y4Y9 91 aaKnown RBP15.87■□□□□ 0.13
PRPF40B-208ENST00000548436 CDK2AP1O14519 115 aa15.86■□□□□ 0.13
PRPF40B-208ENST00000548436 LRP3O75074 770 aa15.86■□□□□ 0.13
PRPF40B-208ENST00000548436 APOC3P02656 99 aa15.86■□□□□ 0.13
PRPF40B-208ENST00000548436 RPL12P30050 165 aaKnown RBP15.86■□□□□ 0.13
PRPF40B-208ENST00000548436 SOX8P57073 446 aa15.86■□□□□ 0.13
PRPF40B-208ENST00000548436 HAGHLQ6PII5 290 aaPredicted RBP15.86■□□□□ 0.13
PRPF40B-208ENST00000548436 Q6ZS49 121 aa15.86■□□□□ 0.13
PRPF40B-208ENST00000548436 PIP4P1Q86T03 277 aa15.86■□□□□ 0.13
PRPF40B-208ENST00000548436 TMEM178AQ8NBL3 297 aa15.86■□□□□ 0.13
PRPF40B-208ENST00000548436 ZNF488Q96MN9 340 aa15.86■□□□□ 0.13
PRPF40B-208ENST00000548436 PLSCR2Q9NRY7 297 aa15.86■□□□□ 0.13
PRPF40B-208ENST00000548436 LOC105371267A0A1B0GV96 52 aa15.85■□□□□ 0.13
PRPF40B-208ENST00000548436 C3orf80F5H4A9 247 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms