RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 LYZL6O75951 148 aa13.19□□□□□ -0.3
CLPTM1-202ENST00000541297 FAM87AP0C7U9 286 aa13.19□□□□□ -0.3
CLPTM1-202ENST00000541297 KIR2DL2P43627 348 aaPredicted RBP13.19□□□□□ -0.3
CLPTM1-202ENST00000541297 RBM39Q14498 530 aaKnown RBP13.19□□□□□ -0.3
CLPTM1-202ENST00000541297 TSC22D1Q15714 1073 aa13.19□□□□□ -0.3
CLPTM1-202ENST00000541297 KRTAP27-1Q3LI81 207 aa13.19□□□□□ -0.3
CLPTM1-202ENST00000541297 NANPQ8TBE9 248 aa13.19□□□□□ -0.3
CLPTM1-202ENST00000541297 NCOR2Q9Y618 2525 aa13.18□□□□□ -0.3
CLPTM1-202ENST00000541297 COLCA2A8K830 154 aa13.18□□□□□ -0.3
CLPTM1-202ENST00000541297 AHRRA9YTQ3 701 aa13.18□□□□□ -0.3
CLPTM1-202ENST00000541297 CRYABP02511 175 aaKnown RBP13.18□□□□□ -0.3
CLPTM1-202ENST00000541297 HCKP08631 526 aa13.18□□□□□ -0.3
CLPTM1-202ENST00000541297 ACKR3P25106 362 aa13.18□□□□□ -0.3
CLPTM1-202ENST00000541297 ZNF529Q6P280 563 aa13.18□□□□□ -0.3
CLPTM1-202ENST00000541297 FAM180AQ6UWF9 173 aa13.18□□□□□ -0.3
CLPTM1-202ENST00000541297 OR5AS1Q8N127 324 aa13.18□□□□□ -0.3
CLPTM1-202ENST00000541297 RPRMLQ8N4K4 120 aa13.18□□□□□ -0.3
CLPTM1-202ENST00000541297 V9GYS6 101 aa13.18□□□□□ -0.3
CLPTM1-202ENST00000541297 IGKV1-9A0A0C4DH69 117 aa13.18□□□□□ -0.3
CLPTM1-202ENST00000541297 SSX5O60225 188 aa13.18□□□□□ -0.3
CLPTM1-202ENST00000541297 VSIG8P0DPA2 414 aa13.18□□□□□ -0.3
CLPTM1-202ENST00000541297 IGHV1-2P23083 117 aa13.18□□□□□ -0.3
CLPTM1-202ENST00000541297 ZNF93P35789 620 aaPredicted RBP13.18□□□□□ -0.3
CLPTM1-202ENST00000541297 PEA15Q15121 130 aa13.18□□□□□ -0.3
CLPTM1-202ENST00000541297 GUSBP1Q15486 140 aa13.18□□□□□ -0.3
CLPTM1-202ENST00000541297 SLC9A3R2Q15599 337 aa13.18□□□□□ -0.3
CLPTM1-202ENST00000541297 RPUSD3Q6P087 351 aaKnown RBP13.18□□□□□ -0.3
CLPTM1-202ENST00000541297 HOGA1Q86XE5 327 aa13.18□□□□□ -0.3
CLPTM1-202ENST00000541297 TLN1Q9Y490 2541 aaKnown RBP13.17□□□□□ -0.3
CLPTM1-202ENST00000541297 EDN3P14138 238 aa13.17□□□□□ -0.3
CLPTM1-202ENST00000541297 CAV2P51636 162 aa13.17□□□□□ -0.3
CLPTM1-202ENST00000541297 TMPRSS3P57727 454 aa13.17□□□□□ -0.3
CLPTM1-202ENST00000541297 QRFPP83859 136 aa13.17□□□□□ -0.3
CLPTM1-202ENST00000541297 CYCSP99999 105 aaKnown RBP13.17□□□□□ -0.3
CLPTM1-202ENST00000541297 HABP2Q14520 560 aaPredicted RBP13.17□□□□□ -0.3
CLPTM1-202ENST00000541297 AKIRIN2Q53H80 203 aa13.17□□□□□ -0.3
CLPTM1-202ENST00000541297 CISD2Q8N5K1 135 aaKnown RBP13.17□□□□□ -0.3
CLPTM1-202ENST00000541297 OR4K15Q8NH41 348 aa13.17□□□□□ -0.3
CLPTM1-202ENST00000541297 PRR14LQ5THK1 2151 aa13.17□□□□□ -0.3
CLPTM1-202ENST00000541297 LINC00587B1AMM8 73 aa13.17□□□□□ -0.3
CLPTM1-202ENST00000541297 SFTA3P0C7M3 94 aa13.17□□□□□ -0.3
CLPTM1-202ENST00000541297 ZNF92Q03936 586 aa13.17□□□□□ -0.3
CLPTM1-202ENST00000541297 UBE2V2Q15819 145 aa13.17□□□□□ -0.3
CLPTM1-202ENST00000541297 ETV3LQ6ZN32 361 aa13.17□□□□□ -0.3
CLPTM1-202ENST00000541297 SEM1Q6ZVN7 128 aa13.17□□□□□ -0.3
CLPTM1-202ENST00000541297 SLC16A13Q7RTY0 426 aa13.17□□□□□ -0.3
CLPTM1-202ENST00000541297 BCL2L2Q92843 193 aaPredicted RBP13.17□□□□□ -0.3
CLPTM1-202ENST00000541297 RNASEK-C17orf49H0YIS7 233 aa13.16□□□□□ -0.3
CLPTM1-202ENST00000541297 AGPAT2O15120 278 aa13.16□□□□□ -0.3
CLPTM1-202ENST00000541297 CBR1P16152 277 aa13.16□□□□□ -0.3
CLPTM1-202ENST00000541297 PI3P19957 117 aa13.16□□□□□ -0.3
CLPTM1-202ENST00000541297 TMEM128Q5BJH2 165 aa13.16□□□□□ -0.3
CLPTM1-202ENST00000541297 NSUN5P2Q63ZY6 315 aa13.16□□□□□ -0.3
CLPTM1-202ENST00000541297 RBMS3Q6XE24 437 aaKnown RBP13.16□□□□□ -0.3
CLPTM1-202ENST00000541297 Q8NA96 180 aa13.16□□□□□ -0.3
CLPTM1-202ENST00000541297 SEMA6DQ8NFY4 1073 aa13.16□□□□□ -0.3
CLPTM1-202ENST00000541297 OR5D18Q8NGL1 313 aa13.16□□□□□ -0.3
CLPTM1-202ENST00000541297 CYYR1Q96J86 154 aa13.16□□□□□ -0.3
CLPTM1-202ENST00000541297 NICN1Q9BSH3 213 aa13.16□□□□□ -0.3
CLPTM1-202ENST00000541297 C5orf66Q9H5L9 145 aa13.16□□□□□ -0.3
CLPTM1-202ENST00000541297 ARR3P36575 388 aa13.16□□□□□ -0.3
CLPTM1-202ENST00000541297 LPAR6P43657 344 aa13.16□□□□□ -0.3
CLPTM1-202ENST00000541297 OR3A4PP47883 348 aa13.16□□□□□ -0.3
CLPTM1-202ENST00000541297 NPY4RP50391 375 aa13.16□□□□□ -0.3
CLPTM1-202ENST00000541297 AWAT2Q6E213 333 aa13.16□□□□□ -0.3
CLPTM1-202ENST00000541297 RTL6Q6ICC9 239 aa13.16□□□□□ -0.3
CLPTM1-202ENST00000541297 MDP1Q86V88 176 aa13.16□□□□□ -0.3
CLPTM1-202ENST00000541297 ANGPTL5Q86XS5 388 aa13.16□□□□□ -0.3
CLPTM1-202ENST00000541297 OR51F2Q8NH61 342 aa13.16□□□□□ -0.3
CLPTM1-202ENST00000541297 TERB2Q8NHR7 220 aa13.16□□□□□ -0.3
CLPTM1-202ENST00000541297 TMEM230Q96A57 120 aa13.16□□□□□ -0.3
CLPTM1-202ENST00000541297 SMIM8Q96KF7 97 aa13.16□□□□□ -0.3
CLPTM1-202ENST00000541297 GPER1Q99527 375 aa13.16□□□□□ -0.3
CLPTM1-202ENST00000541297 OR51B6Q9H340 312 aa13.16□□□□□ -0.3
CLPTM1-202ENST00000541297 NBEAQ8NFP9 2946 aa13.15□□□□□ -0.3
CLPTM1-202ENST00000541297 C9JQL5 133 aa13.15□□□□□ -0.3
CLPTM1-202ENST00000541297 TAS2R31P59538 309 aa13.15□□□□□ -0.3
CLPTM1-202ENST00000541297 OR2A2Q6IF42 318 aa13.15□□□□□ -0.3
CLPTM1-202ENST00000541297 PRSS54Q6PEW0 395 aa13.15□□□□□ -0.3
CLPTM1-202ENST00000541297 CLEC18BQ6UXF7 455 aa13.15□□□□□ -0.3
CLPTM1-202ENST00000541297 PIGTQ969N2 578 aa13.15□□□□□ -0.3
CLPTM1-202ENST00000541297 GPR173Q9NS66 373 aa13.15□□□□□ -0.3
CLPTM1-202ENST00000541297 TRAV20A0A0B4J274 112 aa13.15□□□□□ -0.3
CLPTM1-202ENST00000541297 THBS4P35443 961 aa13.15□□□□□ -0.3
CLPTM1-202ENST00000541297 AKR1C3P42330 323 aa13.15□□□□□ -0.3
CLPTM1-202ENST00000541297 PLP2Q04941 152 aa13.15□□□□□ -0.3
CLPTM1-202ENST00000541297 Q6ZT83 130 aa13.15□□□□□ -0.3
CLPTM1-202ENST00000541297 OR10C1Q96KK4 312 aa13.15□□□□□ -0.3
CLPTM1-202ENST00000541297 C1QTNF5Q9BXJ0 243 aa13.15□□□□□ -0.3
CLPTM1-202ENST00000541297 CHST5Q9GZS9 411 aa13.15□□□□□ -0.3
CLPTM1-202ENST00000541297 FAM215AQ9Y5M1 114 aa13.15□□□□□ -0.3
CLPTM1-202ENST00000541297 MED6O75586 246 aa13.14□□□□□ -0.31
CLPTM1-202ENST00000541297 TNFSF13O75888 250 aa13.14□□□□□ -0.31
CLPTM1-202ENST00000541297 SERPINA5P05154 406 aa13.14□□□□□ -0.31
CLPTM1-202ENST00000541297 F2RL1P55085 397 aa13.14□□□□□ -0.31
CLPTM1-202ENST00000541297 RAB5BP61020 215 aa13.14□□□□□ -0.31
CLPTM1-202ENST00000541297 FAM3AP98173 230 aa13.14□□□□□ -0.31
CLPTM1-202ENST00000541297 NAXEQ8NCW5 288 aa13.14□□□□□ -0.31
CLPTM1-202ENST00000541297 SAT2Q96F10 170 aaPredicted RBP13.14□□□□□ -0.31
CLPTM1-202ENST00000541297 OPN3Q9H1Y3 402 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms